New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 290570	41 (0.660)	3 (0.050)	3/256	NT	6.9%	coding (489/639 nt)	PP_0235	peroxidase
	?	NC_002947	= 290609	41 (0.690)					coding (528/639 nt)	PP_0235	peroxidase

TCGACCCGAATAAAAAGGTGCGCCTGACCATTACCTACCCGGCCAGTACCGGGCGCAACTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATCGTTAATGGATTCCTCGTTGCATTGCTCTTAGCCAAGCAG  >  NC_002947/290461‑290754                                                                                                                                                     |                                                                                                                                                  tcGACCCGAATAAAAAGGTGCGCCTGACCATTACCTACCCGGCCAGTACCGGGCGCAACTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGaa                                                                                                                                                   <  3:116441/149‑1 (MQ=255)   gACCCGAATAAAAAGGTGCGCCTGACCAATACCTACCCGGCCAGTACCCGGCGCAACTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAgt                                                                                                                                                 >  4:26203‑M2/1‑147 (MQ=255)    aCCCGAATAAAAAGGTGCGCCTGACCATTACCTACCCGGCCAGTACCGGGCGCAACTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAgtg                                                                                                                                                <  2:4047‑M2/149‑4 (MQ=255)      ccGAATAAATAGGAGCTCCTGACCATTACCTACCCGGCCAGTACCGGGCGCAACTTCATCGAATTTCTGCGTGTGATCGACTCGCTGCAGCTGACCGACAACCACTAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAgtggt                                                                                                                                              >  2:324252‑M2/1‑144 (MQ=255)        gAATAAAAAGGTGCGCCTGACCATTACCTACCCGGCCAGTACCGGGCGCAACTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGa                                                                                                                                            <  8:150007/149‑1 (MQ=255)         aaTAAAAAGGTGCGCCTGACCATTACCTACCCGGCCAGTACCGGGCGCAACTTCAACGAAAATCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGAt                                                                                                                                           <  4:329856/149‑1 (MQ=255)                 ggTGCGCCTGACCATTACCTACCCGGCCAGTACCGGGCGCAACTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCtt                                                                                                                                   <  5:278255/149‑1 (MQ=255)                     cgcCTGACCATTACCTACCCGGCCAGTACCGGGCGCAACTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCAc                                                                                                                                <  7:77152/148‑1 (MQ=255)                            ccATTACCTACCCGGCCAGTACCGGGCGCAACTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGAt                                                                                                                        <  1:4047/149‑1 (MQ=255)                                  cctaccCGGCCAGTACCGGGCGCAACTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATgagga                                                                                                                   <  5:277823/148‑1 (MQ=255)                                                     gcggAACTTCAACGAAATTCTGCTGCTGATCTACTCGCTGCAGCTGACCGACAACCACAATGTCTCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAATCAGCGCTTcc                                                                                               <  6:389021/149‑1 (MQ=255)                                                     gcgcAACTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTcc                                                                                               <  8:218425/149‑1 (MQ=255)                                                        cAACTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTcccc                                                                                             >  3:137021/1‑148 (MQ=255)                                                         aaCTTCAACTAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTTACTGGCACGACAGCGCGGAAATGTTGATCGTGGCTTCAATAAAAGATGAGGAGTAGATGATGCAGAGCTTCCCaaa                                                                                           >  4:288549/1‑149 (MQ=255)                                                         aaCTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCa                                                                                            >  2:128565/1‑148 (MQ=255)                                                          aCTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCACCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCaaa                                                                                          <  6:81290/149‑1 (MQ=255)                                                           cTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATgaggagg                                                                                                                 <  1:56938/125‑1 (MQ=255)                                                           cTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATgaggagg                                                                                                                 >  2:56938/1‑125 (MQ=255)                                                           cTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAg                                                                                         <  6:337921/149‑1 (MQ=255)                                                           cTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACCCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAg                                                                                         <  5:35514/149‑1 (MQ=255)                                                            ttCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAgg                                                                                        >  4:313233/1‑149 (MQ=255)                                                               aaCGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGtt                                                                                      <  2:6755/148‑1 (MQ=255)                                                               aaCGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTa                                                                                     >  8:344052/1‑149 (MQ=255)                                                               aaCGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTa                                                                                     >  2:291476/1‑149 (MQ=255)                                                                         tGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGt                                                                            >  3:17008/1‑148 (MQ=255)                                                                              gTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAAcc                                                                      <  7:214788/149‑1 (MQ=255)                                                                                         gcagCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGcc                                                           >  8:96117/4‑149 (MQ=255)                                                                                         gCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGATGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGcc                                                           <  3:316199/149‑1 (MQ=255)                                                                                          cTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCt                                                          >  1:50762/1‑149 (MQ=255)                                                                                             cAGCTGACCGACTACCACAATGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGTTGATCGTGCCTTCACTCAAAGATTAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGAc                                                       <  3:288549/149‑1 (MQ=255)                                                                                             cAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGa                                                        <  3:157208/148‑1 (MQ=255)                                                                                                  gACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAgtggttgtcggtcagctgcagcgagtcgatcacccgcagaatttcgttgaagttgcgcccggtactggccgggtaggtaatggtcaggcgcaccttt                                                  <  3:304687‑M2/149‑98 (MQ=255)                                                                                                     cGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAgtggttgtcggtcagctgcagcgagtcgatcacccgcagaatttcgttgaagttgcgcccggtactggccgggtaggtaatggtcaggcgcaccttttta                                               <  6:254807‑M2/149‑101 (MQ=255)                                                                                                     cGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAAc                                               <  3:313233/149‑1 (MQ=255)                                                                                                         aaCCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCaa                                           >  1:65409/1‑149 (MQ=255)                                                                                                          aCCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAAt                                          <  4:17008/149‑1 (MQ=255)                                                                                                           ccACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAgtggttgtcggtcagctgcagcgagtcgatcacccgcagaatttcgttgaagttgcgcccggtactggccgggtaggtaatggtcaggcgcacctttttattcggg                                         <  4:66139‑M2/149‑107 (MQ=255)                                                                                                           ccACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATc                                         >  7:10477/1‑149 (MQ=255)                                                                                                           ccACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATc                                         <  7:96117/149‑1 (MQ=255)                                                                                                           ccACAAGGGCGCCACACCCGGTAACTCGCAGGACGGCGACGAAGTGTTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATc                                         <  6:387516/149‑1 (MQ=255)                                                                                                            cacaAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGCCCCCTCAACCCAATCg                                        >  7:56407/1‑149 (MQ=255)                                                                                                            cacaAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATCg                                        >  6:64387/1‑149 (MQ=255)                                                                                                             acaAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATCGt                                       >  2:68940/1‑149 (MQ=255)                                                                                                                  gTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAAACGTTAATg                                  >  8:109481/1‑149 (MQ=255)                                                                                                                        acacCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATCGTTAATGGATTcc                            >  7:198536/1‑149 (MQ=255)                                                                                                                             cGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATCGTTAATGGATTCCTCGtt                       <  3:185779/149‑1 (MQ=255)                                                                                                                             cGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATCGTTAATGGATTCCTCGtt                       >  4:185779/1‑149 (MQ=255)                                                                                                                                  aCTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATCGTTAATGGATTCCTCGTTGCAt                   <  7:344052/148‑1 (MQ=255)                                                                                                                                    tGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCGATCTGCGCCAGACCCCTCACCCCAATCGTTAATGGATTCCTCGTTGCATTGc                >  2:101856/1‑149 (MQ=255)                                                                                                                                             ggCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATCGTTAATGGATTCCTCGTTGCATTGCTCTTAGcc        >  2:383217/1‑148 (MQ=255)                                                                                                                                                 acgaAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATCGTTAATGGATTCCTCGTTGCATTGCTCTTAGCCAAGCa   <  1:379994/149‑1 (MQ=255)                                                                                                                                                  cgaAgtggttgtcggtcagctgcagcgagtcgatcacccgcagaatttcgttgaagttgcgcccggtactggccgggtaggtaatggtcaggcgcacctttttattcgggtcgatgatgaacagcgagcgcacggtcagggtgtcgctg  >  4:304687‑M2/1‑4 (MQ=255)                                                                                                                                                     |                                                                                                                                                  TCGACCCGAATAAAAAGGTGCGCCTGACCATTACCTACCCGGCCAGTACCGGGCGCAACTTCAACGAAATTCTGCGGGTGATCGACTCGCTGCAGCTGACCGACAACCACAAGGTCGCCACACCCGGTAACTGGCAGGACGGCGACGAAGTGGTGATCGTGCCTTCACTCAAAGATGAGGAGGAGATCAAGCAGCGCTTCCCCAAAGGTTACCGGGCGGTCAAACCCTATCTGCGCCTGACCCCTCAACCCAATCGTTAATGGATTCCTCGTTGCATTGCTCTTAGCCAAGCAG  >  NC_002947/290461‑290754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.