New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 922550 =57 (0.920)3 (0.050) 3/256 NT 5.4% coding (478/1185 nt) PP_0803 protein secretion ABC transporter permease
?NC_002947 922579 = 51 (0.860)coding (449/1185 nt) PP_0803 protein secretion ABC transporter permease

CAACTCGGAACGCTGGCGGTTCAGGCGGATCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAGCGCGGTACTTGGCCTCGCTTTCAC  >  NC_002947/922431‑922723
                                                                                                                                                    |                                                                                                                                                  
cAACTCGGAACGCTGGCGGTTCAGGCGGATCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCgcggcggc                                                                                                                                                    >  7:24323/1‑149 (MQ=255)
 aaCTCGGAACGCTGGCGGTTCAGGCGGATCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCgcggcggcg                                                                                                                                                   >  6:117031/1‑149 (MQ=255)
    tCGGAACGCTGGCGGTTCAGGCGGATCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGt                                                                                                                                                >  3:20980/1‑149 (MQ=255)
    tCGGAACGCTGGCGGTTCAGGCGGATCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCACGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGt                                                                                                                                                >  5:110166/1‑149 (MQ=255)
       gAACGCTGGCGGTTCAGGCGGATCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTg                                                                                                                                             <  8:100058/149‑1 (MQ=255)
       ccagccaggcccgcctgcaggcagaggtgaccggcaagccactgaccttcccggagagcctgcgcgactctcctgacctgatcgatgccgaaaccgcgttgtaccagacccgCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTg                                                                                                                                             >  8:227874‑M1/113‑149 (MQ=255)
        aaCGCTGGCGGTTCAGGCGGATCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTgg                                                                                                                                            <  8:291070/149‑1 (MQ=255)
          cGCTGGCGGTTCAGGCGGATCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTa                                                                                                                                          <  1:347668/149‑1 (MQ=255)
               gCGGTTCAGGCGGATCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCACGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAAcg                                                                                                                                     <  6:110166/149‑1 (MQ=255)
                cGGTTCAGGCGGATCACTTCAACCCCGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAAcgc                                                                                                                                    <  3:49721/149‑1 (MQ=255)
                 ggTTCAGGCGGATCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAAcgcg                                                                                                                                   <  1:377844/149‑1 (MQ=255)
                 ccgcctgcaggcagaggtgaccggcaagccactgaccttcccggagagcctgcgcgactctcctgacctgatcgatgccgaaaccgcgttgtaccagacccgCCGCCAGGGTCTGTTCCAGGCCGcggcggcgg                                                                                                                                                  >  6:226420‑M1/103‑134 (MQ=255)
                 ccgcctgcaggcagaggtgaccggcaagccactgaccttcccggagagcctgcgcgactctcctgacctgatcgatgccgaaaccgcgttgtaccagacccgCCGCCAGGGTCTGTTCCAGGCCGcggcggcgg                                                                                                                                                  <  5:226420‑M1/32‑1 (MQ=255)
                        gCGGATCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCgg                                                                                                                            >  7:115975/1‑149 (MQ=255)
                          ggATCACTTAAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAAAGCGGTTTCGGCa                                                                                                                          >  2:53759/1‑149 (MQ=255)
                             tCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATc                                                                                                                        >  2:136191/1‑148 (MQ=255)
                               aCTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGAt                                                                                                                     <  6:350038/149‑1 (MQ=255)
                               aCTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGAt                                                                                                                     >  6:98842/1‑149 (MQ=255)
                                cTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGAtc                                                                                                                    <  3:170108/149‑1 (MQ=255)
                                cTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGAtc                                                                                                                    <  6:241868/149‑1 (MQ=255)
                                   cAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGAtcag                                                                                                                  <  3:93720/148‑1 (MQ=255)
                                       ccGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGAtcaggtcag                                                                                                             >  6:22468/1‑149 (MQ=255)
                                       ccGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGAtcaggtcag                                                                                                             >  1:244718/1‑149 (MQ=255)
                                       ccGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGAtcaggtcag                                                                                                             <  4:20980/149‑1 (MQ=255)
                                              gAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGga                                                                                                           >  6:166835/1‑144 (MQ=255)
                                              gAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGga                                                                                                           <  5:166835/144‑1 (MQ=255)
                                              gAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGagag                                                                                                        <  6:51883/147‑1 (MQ=255)
                                              gAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTc                                                                                                      <  5:22468/149‑1 (MQ=255)
                                              gAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTc                                                                                                      <  8:115975/149‑1 (MQ=255)
                                                   aCCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCgg                                                                                                                            <  4:357947/122‑1 (MQ=255)
                                                   aCCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCa                                                                                                 <  8:55924/149‑1 (MQ=255)
                                                       aTCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGct                                                                                             >  1:73456/1‑149 (MQ=255)
                                                       aTCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGct                                                                                             >  6:294607/1‑149 (MQ=255)
                                                               cAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCggg                                                                                     >  3:329686/1‑148 (MQ=255)
                                                                  gTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAgg                                                                                 <  5:117031/149‑1 (MQ=255)
                                                                  gTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCAGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAgg                                                                                 >  2:352388/1‑149 (MQ=255)
                                                                      tcGGTGATCTTCAGCTCGCTGCGCACCATCTGCAACGAGTACTGAATACCCGCCATGGTCTGTTCCAGGCCGCGGCGGCTGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCATGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAg                                                                             <  6:213361/149‑1 (MQ=255)
                                                                               ttCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGcc                                                                   >  5:98353/1‑149 (MQ=255)
                                                                                 cAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCgg                                                                 >  2:80013/1‑149 (MQ=255)
                                                                                 cAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCg                                                                  <  5:294607/148‑1 (MQ=255)
                                                                                               ccAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTctgcctgc                                                   <  8:24323/149‑1 (MQ=255)
                                                                                                cAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTctgcctg                                                    >  5:299118/1‑147 (MQ=255)
                                                                                                    tGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCg                                              >  3:312058/1‑149 (MQ=255)
                                                                                                      cAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTGCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCgg                                             <  1:80013/149‑1 (MQ=255)
                                                                                                      cAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCgg                                             <  4:329686/148‑1 (MQ=255)
                                                                                                      cAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCg                                              <  1:136191/147‑1 (MQ=255)
                                                                                                       aaCGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGc                                           <  7:41912/149‑1 (MQ=255)
                                                                                                          gAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCctg                                        >  5:34504/1‑149 (MQ=255)
                                                                                                             tCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCctggct                                     >  7:261483/1‑149 (MQ=255)
                                                                                                             tCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCctggct                                     >  1:26634/1‑149 (MQ=255)
                                                                                                             tCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCctggct                                     >  8:221219/1‑149 (MQ=255)
                                                                                                               cagacccgccgccgcggcctggaacagaccctggcggCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCctggctgg                                   >  8:227874‑M2/38‑149 (MQ=255)
                                                                                                                  aaTACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGcc                                 <  6:299118/148‑1 (MQ=255)
                                                                                                                    tACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCAGCCAGGcccgc                              <  2:73456/149‑3 (MQ=255)
                                                                                                                    ccgccgccgcggcctggaacagaccctggcggCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCgg                                             <  5:226420‑M2/102‑1 (MQ=255)
                                                                                                                    ccgccgccgcggcctggaacagaccctggcggCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCgg                                             >  6:226420‑M2/33‑134 (MQ=255)
                                                                                                                      cccGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCTCAGGCTCTCCGGGAAGGTCATTGCGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTgg                             <  1:276051/149‑1 (MQ=255)
                                                                                                                       CCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTgg                             <  2:260358‑M1/147‑1 (MQ=255)
                                                                                                                       CCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTg                              <  4:110877‑M1/146‑1 (MQ=255)
                                                                                                                       CCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTg                              >  3:110877‑M1/1‑146 (MQ=255)
                                                                                                                          CCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAgcg                        >  8:261483‑M1/1‑149 (MQ=255)
                                                                                                                               gTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAGCGCGGt                    >  8:159732/1‑148 (MQ=255)
                                                                                                                                  tGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAGCGCGGTACtt                >  3:220925/1‑149 (MQ=255)
                                                                                                                                      ccAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAGCGCGGTACTTGGcc            >  3:31817/1‑149 (MQ=255)
                                                                                                                                         ggCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAGCGCGGTACTTGGCCTCg         <  7:221219/149‑1 (MQ=255)
                                                                                                                                          gCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAGCGCGGTACTTGGCCTCGc        <  6:362163/149‑1 (MQ=255)
                                                                                                                                          gCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAGCGCGGTACTTGGCCTCGc        <  4:31817/149‑1 (MQ=255)
                                                                                                                                            cgcgGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAGCGCGGTACTTGGCCTCGCtt      <  5:98842/149‑1 (MQ=255)
                                                                                                                                             gcggcggcgGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAGCGCGGTACTTGGCCTCGCttt     <  6:98353/149‑1 (MQ=255)
                                                                                                                                             gcggcggcgGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAGCGCGGTACTTGGCCTCGCtt      >  6:164239/1‑148 (MQ=255)
                                                                                                                                                gcggCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGGCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAGCGCGGTACTTGGCCTCGCTTTCAc  <  2:244718‑M2/145‑1 (MQ=255)
                                                                                                                                                   gCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCct                                         <  2:14302‑M2/106‑1 (MQ=255)
                                                                                                                                                   gCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCct                                         >  1:14302‑M2/2‑107 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CAACTCGGAACGCTGGCGGTTCAGGCGGATCACTTCAACCCGGCTGGAGGCACCCATCTTTGCCAGGTTCTCGGTGATCTTCAGCTCGCTGCGCACCAGCTGCAACGAGTCCTGAATACCCGCCAGGGTCTGTTCCAGGCCGCGGCGGCGGGTCTGGTACAACGCGGTTTCGGCATCGATCAGGTCAGGAGAGTCGCGCAGGCTCTCCGGGAAGGTCAGTGGCTTGCCGGTCACCTCTGCCTGCAGGCGGGCCTGGCTGGCCCTGGCAGCGCGGTACTTGGCCTCGCTTTCAC  >  NC_002947/922431‑922723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.