New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3156837	41 (0.660)	6 (0.100)	4/258	NT	12.9%	coding (622/1188 nt)	PP_2772	monooxygenase
	?	NC_002947	= 3156867	41 (0.680)					coding (592/1188 nt)	PP_2772	monooxygenase

GGTGATACCCAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGTCGCTGGCGCCTGAG  >  NC_002947/3156727‑3157015                                                                                                                                             |                                                                                                                                                     ggTGATACCCAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTTCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCt                                                                                                                                              <  2:82498/149‑1 (MQ=255)    gATACCCAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGgc                                                                                                                                           >  7:51780/1‑149 (MQ=255)         ccAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTgg                                                                                                                                      >  6:310555/1‑149 (MQ=255)         ccAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTgg                                                                                                                                      <  3:206833/149‑1 (MQ=255)         ccAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTgg                                                                                                                                      >  6:297494/1‑149 (MQ=255)           aGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGcc                                                                                                                                    >  7:170164/1‑149 (MQ=255)                cacGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCAtgt                                                                                                                               >  6:322775/1‑149 (MQ=255)                cacGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCAtgt                                                                                                                               <  5:297494/149‑1 (MQ=255)                   gTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTgt                                                                                                                                                    >  2:338602‑M2/1‑123 (MQ=255)                   gTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTgt                                                                                                                                                    <  1:338602‑M2/125‑3 (MQ=255)                           aaTGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGtca                                                                                                                    <  8:170164/149‑1 (MQ=255)                            aTGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGtca                                                                                                                    >  2:113043/1‑148 (MQ=255)                                aaCTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATg                                                                                                               >  1:69603/1‑149 (MQ=255)                                      gcgATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAgtgt                                                                                                         <  8:269289/149‑1 (MQ=255)                                      gcgATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAgtgt                                                                                                         >  2:366181/1‑149 (MQ=255)                                        gATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGa                                                                                                       >  7:103070/1‑149 (MQ=255)                                            aGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATAcc                                                                                                   >  6:176046/1‑149 (MQ=255)                                                           gCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTggg                                                                                    <  8:207021/149‑1 (MQ=255)                                                           gCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTggg                                                                                    <  5:310555/149‑1 (MQ=255)                                                           gCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTg                                                                                      <  1:50500/147‑1 (MQ=255)                                                             gAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGc                                                                                           <  4:305860/140‑1 (MQ=255)                                                             gAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGc                                                                                           >  3:305860/1‑140 (MQ=255)                                                                gggggTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATgg                                                                               <  2:69603/149‑1 (MQ=255)                                                                      gCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGa                                                                         <  8:51780/149‑1 (MQ=255)                                                                        tCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTTGCGCTGGCCCAGGTTGTTCCAGTCATCATGAAGTGTGATACCGGTCAGGCCGCTGGGGATGGACGCGAt                                                                        >  4:36410/1‑148 (MQ=255)                                                                        tCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAg                                                                            >  5:97422/1‑144 (MQ=255)                                                                        tCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAg                                                                            <  6:97422/144‑1 (MQ=255)                                                                          aGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATcag                                                                     <  1:113043/149‑1 (MQ=255)                                                                                          gaAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGAt                                                                        <  7:93341/130‑1 (MQ=255)                                                                                          gaAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGAt                                                                        >  8:93341/1‑130 (MQ=255)                                                                                            aGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACt                                                   <  4:345867/149‑1 (MQ=255)                                                                                                tctcGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACTTTCa                                               >  5:122344/1‑149 (MQ=255)                                                                                                tctcGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACTTTCa                                               >  2:53734/1‑149 (MQ=255)                                                                                                  tcGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAg                                                       >  1:234973/1‑139 (MQ=255)                                                                                                  tcGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAg                                                       <  2:234973/139‑1 (MQ=255)                                                                                                    gTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACTTTCATCGa                                           >  7:15266/1‑149 (MQ=255)                                                                                                    gTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACTTTCATCGa                                           >  3:83992/1‑149 (MQ=255)                                                                                                       ctctTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTgtcgaagagaacgagatgcttctcgaccccggcccgctgagcacccccttcgccagcctgcgcccgctgatcgcgcagttgcatttcgccaacgtgttcctgggtatcac                                        <  6:389232‑M2/149‑111 (MQ=255)                                                                                                        tctTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTgtcgaagagaacgagatgcttctcgaccccggcccgctgagcacccccttcgccagcctgcgcccgctgatcgcgcagttgcat                                                                  >  6:90727‑M2/1‑38 (MQ=255)                                                                                                        tctTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTgtcgaagagaacgagatgcttctcgaccccggcccgctgagcacccccttcgccagcctgcgcccgctgatcgcgcagttgcat                                                                  >  6:96152‑M2/1‑38 (MQ=255)                                                                                                        tctTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTgtcgaagagaacgagatgcttctcgaccccggcccgctgagcacccccttcgccagcctgcgcccgctgatcgcgcagttgcat                                                                  <  5:96152‑M2/122‑85 (MQ=255)                                                                                                        tctTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTgtcgaagagaacgagatgcttctcgaccccggcccgctgagcacccccttcgccagcctgcgcccgctgatcgcgcagttgcat                                                                  <  5:90727‑M2/122‑85 (MQ=255)                                                                                                        tctTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTAGCAGCCAGAACTTTCATCGACTg                                        >  6:267903/1‑148 (MQ=255)                                                                                                             gACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTgtcgaagagaacgagatgcttctcgaccccggcccgctgagcacccccttcgccagcctgcgcccgctgatcgcgcagttgcatttcgccaacgtgttcctgggtatcaccgaag                                   >  5:389232‑M2/1‑33 (MQ=255)                                                                                                                  gcacgcgcTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATc                             <  8:103070/149‑1 (MQ=255)                                                                                                                       cgcTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCAt                        <  5:267903/149‑1 (MQ=255)                                                                                                                         cTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCAttt                      <  1:366181/149‑1 (MQ=255)                                                                                                                          tCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTCTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTc                     >  2:270521/1‑149 (MQ=255)                                                                                                                            gAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGACGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTcc                    >  7:116175/1‑148 (MQ=255)                                                                                                                                        gCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGTCGCTGgcgc       >  7:54572/1‑149 (MQ=255)                                                                                                                                             tGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGTCGCTGGCGCCTGAg  >  4:351397/1‑149 (MQ=255)                                                                                                                                             |                                                                                                                                                     GGTGATACCCAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGCAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGTCGCTGGCGCCTGAG  >  NC_002947/3156727‑3157015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.