| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 5,555,608 | +GCC | 90.2% | intergenic (‑84/+87) | PP_4887 ← / ← PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5555608 | 4 (0.060) | 36 (0.590) +GCC |
32/260 | NT | 90.2% | intergenic (‑84/+87) | PP_4887/PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | 5555609 = | 4 (0.060) | intergenic (‑85/+86) | PP_4887/PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer | |||||
GTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTG > NC_002947/5555465‑5555755 | gtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggacgcatagcggcccc > 5:36694‑M2/148‑149 (MQ=255) tcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccc < 3:333643‑M2/1‑1 (MQ=255) tgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAAt < 2:234205‑M2/8‑1 (MQ=255) aattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCgt < 6:298954‑M2/16‑1 (MQ=255) aggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTAt < 6:256193‑M2/20‑1 (MQ=255) gtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGca < 7:25977‑M2/23‑1 (MQ=255) gcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGcaaca > 3:138071‑M2/123‑148 (MQ=255) cctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACaaa > 1:55227‑M2/122‑149 (MQ=255) cctgggcagcgattagtcgggcggacatgagaaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACaaa > 3:290961‑M2/122‑149 (MQ=255) gcagggattagtcgggctgacatgcgcaagtcattttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggtgcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTgg < 6:36694‑M2/33‑1 (MQ=255) agtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCCGCGATTTCCGCGTGTATGCATCAAACCaggggctggaat > 6:177977‑M2/108‑145 (MQ=255) gtcgggcggacttgaggatctcgttttgtaatgtgtcgccgagagcatagcaacaccgctgaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAt < 4:290961‑M2/42‑1 (MQ=255) acatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCATAGcagccccag < 3:370607‑M2/52‑4 (MQ=255) tgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtttagcgaaagggccgcaaatcggccCCGGCAATTTGCGCGGGTATGCAACAAACCTGGGGCTGGTATGCAGCCCATTggc > 7:71494‑M2/95‑149 (MQ=255) agcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtttagcgaaagggccgcatagcggccCCGGCAATTTACGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTcgcg > 7:195204‑M2/93‑148 (MQ=255) agcaactccttttgtaatgtgtcgccgacagcatagcaacaccgctcaggtgtgggtgcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGa < 7:201377‑M2/57‑1 (MQ=255) cttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAg < 4:138071‑M2/63‑1 (MQ=255) tgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCcgc > 2:338233‑M2/81‑94 (MQ=255) tgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtagcgaaagggccgcatagcggccCCGGCAATTTACGCGGGTATGGCACAAACCTGGGGCTGGTATGCAGCCCGTTCGCGGCCCAAGGCCCCCCaaggcc > 6:187650‑M2/74‑147 (MQ=255) gccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACcgcg > 3:296232‑M2/70‑149 (MQ=255) aTAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTAGCGGAAGGGCCCCGAAGGGGGCCCGGGGAATTGCGCGTGGTTGGAAAAAAACTGGGGGTGGAATGGACCCCATTCGCGCCACAAGGGCCCCCAAGGCCCCCGCCAGCTTc > 6:270561/1‑148 (MQ=255) caacaccgcgctggggtgggagcggcgttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGcc < 3:352453‑M2/93‑1 (MQ=255) cgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCGTTCGCGACACAAGGCCCCCAAAGGCCCGCGCAGGCGTCAGGCCCGGAAc > 5:278508‑M2/51‑149 (MQ=255) gCTCAGGTGTGGGAGCGGCCTTGTGTAGCGAAACGGCCGCCAAGCGGCCCCGGGAAATTGCCGGGGGATGGAACAAACCAGGGGCGGGGATTGAGCCCGTTCGCGACACCAGGGCCCCCAAGGACCGCGCAGGCGTCAGGCCCCGAACt > 8:123775/1‑149 (MQ=255) cTCAGGTGTGGGAGCGGCCTTGTTTAGCGCAAGGGCCCCCTAGCGGCCCCGGCAATTTACGCGGGTATGCAACAAAACAGGGGCGGCTATGCAGCCCGTTCGCGGCACAACGGCCCCAAACGCCCGCCCCGGCTTGCGGGCCGGCAcag > 8:93146/1‑147 (MQ=255) aGGTGGGGGCGCGGCCTTCTGTCCCGACAGGGCCCCATAGCGGCCCCGGCAATCTCCGCGTGTATGCACCACACCTGGGGCTGCTATGCAGCCCGTTCGCGACACAAGGCCCACAAAGGCCCGCGCAGGCTTCAGGCCCGGAACTGGcc < 6:278508/149‑1 (MQ=255) ggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTg < 6:274665‑M2/111‑1 (MQ=255) gagcggccttgtggcgcgaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGgc < 7:316906‑M2/113‑1 (MQ=255) cggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGgcgc < 2:55227‑M2/115‑1 (MQ=255) ccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCACGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGgcgcg > 1:271165‑M2/32‑147 (MQ=255) cttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCGAGGAACTGGCCCAGGCTGGCGCGCAg > 6:162409‑M2/31‑149 (MQ=255) gcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgcc < 3:60068‑M2/126‑1 (MQ=255) gcgaaagggccgcatagcggccCCGGCAAATTCCGCGAGTATGCAACAAACCTGGGGCTGCTATGCAGCCATTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgccg > 2:347102‑M2/23‑149 (MQ=255) cgaacgggccgcatagcggccCCGGCAATTTCCGCGTGTCTGCAACAAACCTGGGGCTCCTATGCAGCCCTTGCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCACGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgccgc < 8:71494‑M2/128‑1 (MQ=255) cgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCCGCTGAgccgc > 6:35159‑M2/22‑149 (MQ=255) cggggccgctatgcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGgcgcgc < 7:251289‑M2/117‑1 (MQ=255) cggggccgctatgcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGgcgcgc > 8:251289‑M2/19‑135 (MQ=255) aagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCAAGGCTGCAGCGCAGCTTAgccgc > 1:50281‑M2/19‑146 (MQ=255) ggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGatc < 1:172029‑M2/134‑1 (MQ=255) ccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGatcat < 7:93146‑M2/136‑1 (MQ=255) cgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGatcatc < 4:296232‑M2/137‑1 (MQ=255) cgcatagcggccCCGGCAATTTCCGCGTGTATGATACAAACCTGTGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGatcatc < 4:273570‑M2/137‑1 (MQ=255) tagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACGGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGc < 5:270561‑M2/141‑1 (MQ=255) gcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCt < 5:174769‑M2/121‑1 (MQ=255) gcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCt > 6:174769‑M2/7‑127 (MQ=255) cggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCAcc > 5:49878‑M2/6‑149 (MQ=255) cggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCAcc < 8:195204‑M2/144‑1 (MQ=255) ccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTg > 8:248061‑M2/3‑149 (MQ=255) | GTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTG > NC_002947/5555465‑5555755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |