| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | 100% | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 0 (0.000) | 28 (0.470) +CGGG |
25/258 | NT | 100% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 0 (0.000) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
CGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTG > NC_002947/5681273‑5681563 | atacatgcaaacacagacctcctgaggggggctgggttcctgttgtgatgctgatggcgtcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggctgct < 5:68165‑M2/6‑1 (MQ=255) aaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGcc < 5:256173‑M2/14‑1 (MQ=255) aaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgcacggGCTGCTGCgccgcc > 7:159507‑M2/136‑149 (MQ=255) aaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgggggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGcc < 8:50068‑M2/14‑1 (MQ=255) acagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCGCAGcagccccgg < 4:123081‑M2/18‑4 (MQ=255) cagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATc < 7:7860‑M2/19‑1 (MQ=255) gacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATcgc < 3:151385‑M2/21‑1 (MQ=255) cctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGa < 4:266585‑M2/23‑1 (MQ=255) cctcctgaggtgggctgggttcctgttgtgatgctgatggctgcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGa < 5:306050‑M2/23‑1 (MQ=255) ctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGac < 2:359496‑M2/24‑1 (MQ=255) tgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGAcaca > 8:300785‑M2/112‑138 (MQ=255) tgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGAcaca < 7:300785‑M2/27‑1 (MQ=255) ttgtgatgctgatggcttcgttctttgtgggagcggccatttgtagcgaaaggggcgcgaagcggccccaggctttaattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATAGCGAAACAAAGCCGCTCCCACTACA‑Gacc > 6:377187‑M2/102‑149 (MQ=255) tgtgatgctgatggcttcgttctttgtgggagcggccatgtttcgcgaaaggggcgcgaagcggccccccgcgttcattgccacagcatgaaccgcccggGCGGCTGCGCAGCCCGATAGCGACACAAAGCCGCTGCCACGACA‑gaccc > 6:155727‑M2/101‑148 (MQ=255) tagcggccttgtggcgagaatggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCTACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCaa < 5:377187‑M2/78‑1 (MQ=255) cggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCAGCGCCTCACAACCTAACCAAGGt > 2:130718‑M2/69‑149 (MQ=255) gtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTg > 3:114764‑M2/62‑149 (MQ=255) gcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGGGCCTCACATCCTAACCAAGGTCAGGTTg > 7:92458‑M2/57‑144 (MQ=255) gggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATc < 5:333006‑M2/70‑1 (MQ=255) cgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCa < 7:193815‑M2/90‑1 (MQ=255) cgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCa > 8:193815‑M2/47‑136 (MQ=255) gccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCt < 5:127663‑M2/112‑1 (MQ=255) ctggctttcattcccactcaatgaaccgccgggGCTGCTGCCCAGCCCTATCCCCACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTcc < 3:114427‑M2/116‑1 (MQ=255) ggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCaa < 8:92458‑M2/118‑1 (MQ=255) attgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAcc < 4:114764‑M2/125‑1 (MQ=255) attgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCACCCTTTCCAATGCGAc > 3:316568‑M2/25‑148 (MQ=255) ttgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCa < 7:251355‑M2/126‑1 (MQ=255) catgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGAACCGCCTCACGCACCAGCCGTTCCAATGCGACCAGGTCCGGTa > 2:65436‑M2/15‑149 (MQ=255) gccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GCCCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGcc > 5:183018‑M2/7‑149 (MQ=255) ccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCa > 4:89022‑M2/6‑149 (MQ=255) gctgctGCGCAGCGCTATCGCGACACAAGGCCGCTCCCACTACACGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTg < 1:130718/149‑1 (MQ=255) | CGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTG > NC_002947/5681273‑5681563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |