Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	2038183	2038402	220	27 [25]	[23] 26	[rffE]	[rffE]

GCGGAAGGGGGGCTGCTGGCCAGTTTTTACTGGGGGGCGGCGGGGCTGCGGATATCGTATTCGCGGGTGAACCCGCACCTACATTGAGCGGT‑GGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCTGGGCGCTCGGTAGTGT  >  NC_002947/2038259‑2038551                                                                                                                                                  |                                                                                                                                                     gcgGAAGGGGGGCTGCTGGCCAGTTTTTACTGGGGGGCGGCGGGGCTGCGGATATCGTATTCGCGGGTGAACCCGCACCTACATTGAGCGGT‑GGGGGGGGGGCCAGGTGGCAAGGGCTTTGGGTATGCGCGCGCAGGCTTTGCCATCGc                                                                                                                                                  >  4:250724/1‑149 (MQ=255)                                                       tCGTATTCGCGGGTGAACCCGCACCTACATTGAGCGGT‑GGGGGGGGGGCCAGGTGGCCCGGGCTTTGCGTATGCGCCCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCGCATTTCCCGATCCGCCGCCGCATCGGTCAGc                                                                                             >  2:198357/1‑148 (MQ=255)                                                          tATTCGCGGGTGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCAGCCTACTCGGGCAGCAAg                                                                                          >  7:343649/1‑149 (MQ=255)                                                                     gAACCCGCACCTACATTGAGCGGT‑GGGGGGGGGGCCAGGTGGCCAGGGCTTTGCCTATGCCCCCGCAGGCTTTGCCATCGCCATAGGCGTTAAGCGCGAAGCTCATTTCCCGAAACGCCGCCTCATCGGTCAGCAAGGAACTCAAcccc                                                                              >  7:122643/1‑149 (MQ=255)                                                                             aCCTACATTGAGCGGT‑GGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAAt                                                                      >  8:13442/1‑149 (MQ=255)                                                                                    ttGAGCGGT‑GGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGc                                                                >  6:362680/1‑148 (MQ=255)                                                                                                       gCCAGGTGGCCAGGGCTTTGCGTATGAGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTACGGTGCCCACCAGc                                             >  4:321715/1‑149 (MQ=255)                                                                                                                ccAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTa                                    <  7:13442/149‑1 (MQ=255)                                                                                                                 cAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTAc                                   >  7:90325/1‑149 (MQ=255)                                                                                                                 cAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTAc                                   >  7:95941/1‑149 (MQ=255)                                                                                                                       tttGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTgccg                             >  5:49585/1‑149 (MQ=255)                                                                                                                               tGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGc                      <  5:362680/148‑1 (MQ=255)                                                                                                                               tGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGc                      <  8:90325/148‑1 (MQ=255)                                                                                                                                  gcgcgcAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCt                  <  8:95941/149‑1 (MQ=255)                                                                                                                                    gcgcAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCAGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCTgg                >  5:268421/1‑149 (MQ=255)                                                                                                                                     cgcAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTAGTAAACGCCCGCAGAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCTggg               <  8:122643/149‑1 (MQ=255)                                                                                                                                          gCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTc                   >  8:108739/1‑140 (MQ=255)                                                                                                                                          gCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTc                   <  7:108739/140‑1 (MQ=255)                                                                                                                                          gCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCTGGGCGCTc          >  7:333890/1‑149 (MQ=255)                                                                                                                                            tttGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCTGGGCGCTCgg        >  5:256667/1‑149 (MQ=255)                                                                                                                                              tGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCTGGGCGCTCgg        <  1:198357/147‑1 (MQ=255)                                                                                                                                               gCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCTGGGCGCTCGGTa      <  6:49585/148‑1 (MQ=255)                                                                                                                                               gCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCTGGGCGCTCGGTAg     >  3:130789/1‑149 (MQ=255)                                                                                                                                                  aTCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCTgg                >  1:187661/1‑135 (MQ=255)                                                                                                                                                  aTCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCTgg                <  2:187661/135‑1 (MQ=255)                                                                                                                                                  aTCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATAGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCTGGGCGCTCGGTAgtgt  >  8:153245/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GCGGAAGGGGGGCTGCTGGCCAGTTTTTACTGGGGGGCGGCGGGGCTGCGGATATCGTATTCGCGGGTGAACCCGCACCTACATTGAGCGGT‑GGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCACGGCTTCTGGGCGCTCGGTAGTGT  >  NC_002947/2038259‑2038551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑