| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,624,548 | G→A | 6.6% | intergenic (+3141/+1423) | PP_5654 → / ← PP_4091 | phosphotriesterase/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,624,548 | 0 | G | A | 6.6% | 218.7 / 3.9 | 75 | intergenic (+3141/+1423) | PP_5654/PP_4091 | phosphotriesterase/transposase |
| Reads supporting (aligned to +/- strand): ref base G (33/37); new base A (3/2); total (36/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.52e-02 | |||||||||||
GTTTTAGATTATGTCCCCTGAGAAAAAAATAATGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGAAAAAATAGGGCATTTATTTGATTCTATAAACAT > NC_002947/4624407‑4624694 | gTTTTAGATTATGTCCCCTGAGAAAAAAATAATGGCTACCATTAGAAAAGGATACCGAAGACA‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTg > 7:43015/1‑149 (MQ=255) tAGATTATGTCCCCTGAGAAAAAAATAATGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGttt < 4:296255/148‑1 (MQ=255) aGATTATGTCCCCTGAGAAAAAAATAATGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTc > 5:137101/1‑148 (MQ=255) gATTATGTCCCCTTAGAAAAAAATAATGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCaa < 5:206964/149‑1 (MQ=255) ataaagTCCCCAGAGAAAAAAATAATCGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAg < 6:306129/144‑1 (MQ=255) aTTATGTCCCCTGAGAAAAAAATAATTGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCaa < 3:212643/148‑1 (MQ=255) ttATGTCCCCTGAGAAAAAAATAATTGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGc < 4:303222/149‑1 (MQ=255) ccccTGAGAAAAAGATAATGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTaa > 8:228545/1‑148 (MQ=255) cccTGAGAAAAAAATAATGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGGTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTaac > 3:56296/1‑148 (MQ=255) cccTGAGAAAAAAATAATGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTaac > 6:51547/1‑148 (MQ=255) cccTGAGAAAAAAATAATGGCTACCATTAGAAAAGGATACCAAAAACC‑TCATGACATTGAAATGCTGAATAGAGAAATTTACAAATGGCTTTGAAATAAAAAAAAAGAAAGCAGGAAAATAAAAATGAAATTTTTTAAAAGcttaaaa > 8:239692/1‑142 (MQ=255) ccTGAGAAAAAAATAATGGCTACCATTAGAAAACGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTaacaa < 4:86043/149‑1 (MQ=255) cTGAGAAAAAAATAATGGCTACCATTAGAAAAGGATACCGAAGACCAGCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGTAATTTGTTTCAAGCGTTaaca > 1:281157/1‑148 (MQ=255) agaAAAAAATAATGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACt < 2:186635/147‑1 (MQ=255) gaAAAAAATAATGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCa < 5:62307/148‑1 (MQ=255) aaaatTAATGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACAATGAAATGCTGCCTAGAGAAAGTTTAACTTGGCTTTCCAAAGACAATCTAGCTAGCAGGGAATTTGTAATGGATTTTGTTTCAAGCGTTAACAACTCAAAAt > 2:89545/1‑149 (MQ=255) aaaaTAATGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAAtt > 8:245711/1‑149 (MQ=255) taatGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTATCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCt < 8:258443/149‑1 (MQ=255) cTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTTGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGt > 3:358513/1‑148 (MQ=255) ccATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCAt < 7:245711/148‑1 (MQ=255) aGAAACCGATACCGAAGACC‑GCATGACATTGAAATGCTGGCTCGCGAACTTTCCACATGGCTTTGCAATGACAAACTAGCTCGCAGGTAAATTCTAATGGAATTTGTTTCAAGCGTTAACTACTCAAAATTCCCTGACGTCTTTCTAc < 4:269732/148‑1 (MQ=255) aaaaGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTaa > 7:285541/1‑149 (MQ=255) aaaaGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTaa > 4:240956/1‑149 (MQ=255) aaaaGGATACCGAAGACC‑TAATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCACTGACGTCATTCAACTaa > 8:49998/1‑149 (MQ=255) aaaGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAAc < 4:282192/149‑1 (MQ=255) gATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGATATTTACTCATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCttt < 4:56296/149‑1 (MQ=255) aTACCGAAGACC‑TAATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCttt < 7:239692/148‑1 (MQ=255) tACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTg > 4:346372/1‑148 (MQ=255) tACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGa < 8:285541/149‑1 (MQ=255) tACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGa < 3:346372/149‑1 (MQ=255) tACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGa < 5:51547/149‑1 (MQ=255) cGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGtt > 4:304843/1‑105 (MQ=255) cGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGtt < 3:304843/105‑1 (MQ=255) aaGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACt < 2:80875/149‑1 (MQ=255) gACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTg < 1:189454/149‑1 (MQ=255) c‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAg > 8:185119/1‑149 (MQ=255) aTTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATc > 4:9106/1‑149 (MQ=255) aaTGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTc < 7:49998/149‑1 (MQ=255) aTGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCa < 4:279410/149‑1 (MQ=255) tGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGa > 5:28435/1‑148 (MQ=255) tGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGa > 5:34020/1‑148 (MQ=255) cTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGTGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGc < 2:281157/149‑1 (MQ=255) gAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGt < 1:241009/148‑1 (MQ=255) gAAATTTACACATGGATTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCGCTGAAGTCATTCAACTAACCTTTGAATACTATAAGCTCCTATCCAGTCATGAAACCTAGt > 4:313360/1‑148 (MQ=255) aaaTTTACACATGGCGTTGGAAAGACAAACTAGCTAGCAGGGAAATTGTTATGGAATTTGTTTGAAGCGGTTACAACTCAAAATTACCGGACGTCATTCAACTTACCTTTGAATACTTGAAGCGCCTTTCCACTACAGCAAGCGAGttt > 4:368466/1‑148 (MQ=255) aTTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACt < 7:185119/149‑1 (MQ=255) tgagggaTGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACtat < 1:79198/143‑1 (MQ=255) aTGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACTTCATTCAACTAAACTTTGAATACTTTAAGCGACTATCCACTCATGAAAGAGAGTTACTATACgat > 5:389461/1‑147 (MQ=255) aTGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGAGCCTATCCACTCATGAAAGCGAGTTACTATACgag > 4:368529/1‑148 (MQ=255) aTGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTAATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTAATATACgag > 5:195568/1‑148 (MQ=255) aTGGC‑TTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACgag > 6:69262/1‑147 (MQ=255) tGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACgag > 6:370172/1‑147 (MQ=255) gCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACgagga > 6:290681/1‑147 (MQ=255) gCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACgagga < 5:290681/147‑1 (MQ=255) gCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGgaga < 1:202838/149‑1 (MQ=255) gCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGgaga < 5:370172/149‑1 (MQ=255) gcttGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGgaga < 5:69262/146‑1 (MQ=255) tttGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACtt < 6:329486/103‑1 (MQ=255) tttGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACtt > 5:329486/1‑103 (MQ=255) aaaCTAGCTACCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGAAAAAATAgg > 4:80045/1‑149 (MQ=255) gatagcAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCTCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCTaaaa > 6:286685/3‑137 (MQ=255) ttgaaacaaaTTCCATTAGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGAAAAAATAGGGCatttatt > 5:58609/8‑149 (MQ=255) gcAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGAAAAAATAGGGCatttatt < 7:228545/148‑1 (MQ=255) gaaacaaaTTCCATTAGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACgagg < 4:241516/117‑1 (MQ=255) gaaacaaaTTCCATTAGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACgagg < 4:236662/117‑1 (MQ=255) gaaacaaaTTCCATTAGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACgagg > 3:236662/6‑122 (MQ=255) gaaacaaaTTCCATTAGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACgagg > 3:241516/6‑122 (MQ=255) gggAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGaa < 8:171642/128‑1 (MQ=255) gggAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGaa > 7:171642/1‑128 (MQ=255) ggAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGAAAAAATAGGGCATTTATTTGAtt < 4:358513/149‑1 (MQ=255) gAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGAAAAAATAGGGCATTTATTTGATTc < 6:137101/149‑1 (MQ=255) aaTGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGAAAAAATAGGGCatttatt > 7:297863/1‑135 (MQ=255) aaTGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGAAAAAATAGGGCatttatt < 8:297863/135‑1 (MQ=255) aTGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGAATAAATAGGGGATTTATTTGATGCTATAAAcat > 8:349408/1‑149 (MQ=255) aTGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGAAAAAATAGGGCATTTATTTGATTCTATaaa < 3:240956/146‑1 (MQ=255) | GTTTTAGATTATGTCCCCTGAGAAAAAAATAATGGCTACCATTAGAAAAGGATACCGAAGACC‑TCATGACATTGAAATGCTGGCTAGCGAAATTTACACATGGCTTTGCAATGACAAACTAGCTAGCAGGGAAATTCTAATGGAATTTGTTTCAAGCGTTAACAACTCAAAATTCCCTGACGTCATTCAACTAACCTTTGAATACTTGAAGCGCCTATCCACTCATGAAAGCGAGTTACTATACGAGGAGAGCGAAAAAATAGGGCATTTATTTGATTCTATAAACAT > NC_002947/4624407‑4624694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |