Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	4,875,944	G→T	6.1%	G378C (GGC→TGC)	PP_4284 →	transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,875,944	0	G	T	6.1%	185.6 / 3.5	66	G378C (GGC→TGC)	PP_4284	transporter
Reads supporting (aligned to +/- strand):  ref base G (32/30);  new base T (2/2);  total (34/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.88e-01

GGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTTCATCAGCTATGTGGCATTGAAGGCGGGTACCGGC  >  NC_002947/4875797‑4876090                                                                                                                                                    |                                                                                                                                                   ggggTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATggg                                                                                                                                                   <  6:218619/149‑1 (MQ=255)    ggtGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGgcag                                                                                                                                                <  4:197620/147‑1 (MQ=255)      tGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGATGATGATGGgcagca                                                                                                                                              >  6:391803/1‑149 (MQ=255)         cGCAGGTGGCCGAACTGGCCTGAGGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATgg                                                                                                                                           >  8:235550/1‑149 (MQ=255)          gCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCTCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGgc                                                                                                                                          >  6:235358/1‑149 (MQ=255)              gTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGca                                                                                                                                       >  2:387521/1‑148 (MQ=255)                   cGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCa                                                                                                                                 >  5:341566/1‑149 (MQ=255)                    gAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCAt                                                                                                                                >  3:201496/1‑149 (MQ=255)                     aaCTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCAtt                                                                                                                               >  8:361117/1‑149 (MQ=255)                            cTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGa                                                                                                                        <  5:62224/149‑1 (MQ=255)                            cTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGa                                                                                                                        <  5:68282/149‑1 (MQ=255)                               aCGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAg                                                                                                                       <  1:387521/147‑1 (MQ=255)                                cGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGTGCGCCATGCTGCCCATcatca                                                                                                                               >  2:123690/1‑134 (MQ=255)                                cGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGTGCGCCATGCTGCCCATcatca                                                                                                                               <  1:123690/138‑5 (MQ=255)                                 ggCTGTGGTGGTAGGCCTGGTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATTCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGcc                                                                                                                    <  4:106534/148‑1 (MQ=255)                                 ggCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCa                                                                                                                   >  4:280085/1‑149 (MQ=255)                                  gCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCAc                                                                                                                  <  6:341566/149‑1 (MQ=255)                                        gtggtAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGTGCGCCATGCTGCCCATc                                                                                                                                   >  4:242711/1‑126 (MQ=255)                                        gtggtAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGTGCGCCATGCTGCCCATc                                                                                                                                   <  3:242711/126‑1 (MQ=255)                                           gtAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCAt                                                                                                         >  1:285828/1‑149 (MQ=255)                                                ccTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCgg                                                                                                    >  3:287088/1‑149 (MQ=255)                                                    ctgTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGAt                                                                                                                          <  2:269151/123‑1 (MQ=255)                                                    ctgTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGAt                                                                                                                          >  1:269151/1‑123 (MQ=255)                                                      gTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCg                                                                                              >  6:137065/1‑149 (MQ=255)                                                       ttCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATc                                                                                               <  2:19017/147‑1 (MQ=255)                                                         cATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTca                                                                                           >  3:111775/1‑149 (MQ=255)                                                          aTCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTca                                                                                           <  7:361117/148‑1 (MQ=255)                                                          aTCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATCATTCCCGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTca                                                                                           >  6:277880/1‑148 (MQ=255)                                                           tCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCAtt                                                                                                                               <  2:325019/111‑1 (MQ=255)                                                           tCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCTTTCCGGCGATCGTca                                                                                           >  8:358435/1‑147 (MQ=255)                                                           tCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACAACGAtt                                                                                                                               >  1:325019/1‑111 (MQ=255)                                                              ccgcGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGt                                                                                       >  8:267280/1‑148 (MQ=255)                                                              ccgcGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGt                                                                                       >  8:242136/1‑148 (MQ=255)                                                               cgcgATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGa                                                                                     >  2:193450/1‑149 (MQ=255)                                                               cgcgATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGa                                                                                     <  7:267280/149‑1 (MQ=255)                                                                gcgATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGAt                                                                                    <  4:287088/149‑1 (MQ=255)                                                                        cttcGCTCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTTCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCatgatg                                                                             <  1:382373/148‑1 (MQ=255)                                                                        cttcGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCatgatg                                                                             <  4:201496/148‑1 (MQ=255)                                                                        cttcGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCatgatg                                                                             <  7:235550/148‑1 (MQ=255)                                                                         ttcGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGcc                                                                           >  6:148238/1‑149 (MQ=255)                                                                           cgcgCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCg                                                                          <  5:391803/148‑1 (MQ=255)                                                                           cgcgCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGc                                                                         >  4:1774/1‑149 (MQ=255)                                                                            gcgcCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCt                                                                        >  3:361370/1‑149 (MQ=255)                                                                             cgccgcTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGACACAGTGATCATGATGCCGCTg                                                                       <  7:242136/149‑1 (MQ=255)                                                                                       cGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCgg                                                             >  4:140186/1‑149 (MQ=255)                                                                                        gggATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGt                                                            >  1:333102/1‑149 (MQ=255)                                                                                         ggATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGAGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATTCCGCTGACGTTCTCGGTc                                                           <  5:235358/149‑1 (MQ=255)                                                                                              atTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGa                                                      >  6:186781/1‑149 (MQ=255)                                                                                                tCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATg                                                    >  5:300460/1‑149 (MQ=255)                                                                                                 ccGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATg                                                    <  3:1774/148‑1 (MQ=255)                                                                                                      cTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTg                                              <  5:148238/149‑1 (MQ=255)                                                                                                           cGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTg                                         <  3:280085/149‑1 (MQ=255)                                                                                                                  agGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGTGATGAGGCCACCGACAGCATTCCGGAGATCGTCACAGTTATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGTCTtca                                  <  5:277880/149‑1 (MQ=255)                                                                                                                   ggTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTtcat                                 <  3:140186/149‑1 (MQ=255)                                                                                                                   ggTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCGGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTtcat                                 <  2:285828/149‑1 (MQ=255)                                                                                                                       cACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTTCATCAGc                             >  7:17141/1‑149 (MQ=255)                                                                                                                            aTCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATAATGATGCCGCTGACGTTATCGGTCGCCGATGGTATTGCCCTGGGCTTCATCAGCTAtgt                        >  4:309449/1‑149 (MQ=255)                                                                                                                               tACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTTCATCAGCTATGTgg                      >  5:79772/1‑148 (MQ=255)                                                                                                                                 cGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTTCATCAGCTATGTGGc                     <  5:137065/147‑1 (MQ=255)                                                                                                                                           cTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTTCATCAGCTATGTGGCATTGAAGGCgg          <  4:111775/148‑1 (MQ=255)                                                                                                                                           cTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTTCATCAGCTATGTGGCATTGAAGGCgg          <  2:333102/148‑1 (MQ=255)                                                                                                                                           cTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTTCATCAGCTATGTGGCATTGAAGGCgg          <  8:57176/148‑1 (MQ=255)                                                                                                                                            tgatgaTGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTtc                                   <  6:261284/122‑1 (MQ=255)                                                                                                                                            tgatgaTGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTtc                                   >  5:261284/1‑122 (MQ=255)                                                                                                                                             gatgatGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCAGCGGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTTCATCAGCTATGTGGCATTGAAGGCGGGTa       >  7:249740/1‑149 (MQ=255)                                                                                                                                                 atgGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCg                                                          <  4:378351/94‑1 (MQ=255)                                                                                                                                                 atgGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCg                                                          >  3:378351/1‑94 (MQ=255)                                                                                                                                                   gggCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTTCATCAGCTATGTGGCATTGAAGGCGGGTACCGGc  >  1:277565/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTTCATCAGCTATGTGGCATTGAAGGCGGGTACCGGC  >  NC_002947/4875797‑4876090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑