| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,936,919 | A→T | 9.1% | intergenic (‑330/‑88) | flhA ← / → PP_4345 | flagellar export pore protein/GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,936,919 | 0 | A | T | 9.1% | 183.7 / 7.7 | 66 | intergenic (‑330/‑88) | flhA/PP_4345 | flagellar export pore protein/GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (28/32); new base T (3/3); total (31/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.82e-01 | |||||||||||
CTACGGCAATGGCCAAAGGCTTAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCG > NC_002947/4936773‑4937061 | ctACGGCAATGGCCAAAGGCTTAAGCTCTTGGAAAGCCACAGAGAGGGTCGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAAcat > 8:32955/1‑148 (MQ=255) cGGCAATGGCCAAAGGCTTAAGCTCTTTGAAAGTCAAAGATAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATg < 7:277109/149‑1 (MQ=255) cGGCAATGGCCAAAGGCTTAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAAcatcat < 7:32955/148‑1 (MQ=255) ggCAATGGCCAAAGGCTTAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGc < 6:258713/149‑1 (MQ=255) aTGGCCAAAGGCTTAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGATGTTCATGccttt < 8:710/149‑4 (MQ=255) ttgCCAAACGCATAATCCTTTTGAAATCCACACACATGGTTGCGGCAACAAAAAAAAAATCTTACCCAACTTATCATTCAAAACCTCACGGGTTCAAAGCCGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAAc < 1:285937/147‑1 (MQ=255) tGGCCAAAGGCTTAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACt < 1:209877/149‑1 (MQ=255) gCCAAAGGCTTAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGATGTTCATGcctttga < 5:138390/148‑6 (MQ=255) ccAAAGGCTTAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGATGTTCATGcctttga > 2:193356/1‑142 (MQ=255) ccAAAGGCTTAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGATGTTCATGcctttga < 1:193356/147‑6 (MQ=255) cAAAGGCTTAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGc < 3:301077/140‑1 (MQ=255) cAAAGGCTTAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTc < 8:117516/149‑1 (MQ=255) aGGCTTAAGCTCTTGGAAACCCACAGACAGGGTCGCGCCACGACAAAAAAAATCTGAGCGACTTGATCAAGCAAAAGCTCACGCTTTCTATC‑CGGATCTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGAt < 8:217398/149‑1 (MQ=255) ggCTTAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATg < 3:180241/149‑1 (MQ=255) ttAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGCGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATgg > 5:226600/1‑147 (MQ=255) ttAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATgg > 3:185486/1‑147 (MQ=255) ttAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTa < 4:185486/149‑1 (MQ=255) gCTCTTGGAAAGCCACAGAGAGTGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTGGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGctc < 8:154271/149‑1 (MQ=255) gCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGctc < 4:213649/149‑1 (MQ=255) ttGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCGAATGACTACTCAAAGGCATGAACATCATGCCAAGTGCTCGATGGTAGCTCTAGt > 5:192028/1‑149 (MQ=255) gAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAg > 1:73771/1‑149 (MQ=255) gAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAg > 4:265192/1‑149 (MQ=255) aaGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTc > 3:188314/1‑149 (MQ=255) gCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCtg < 6:226600/149‑1 (MQ=255) ggTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCg < 2:73771/149‑1 (MQ=255) gACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGt < 3:276754/120‑1 (MQ=255) gACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGt > 4:276754/1‑120 (MQ=255) gACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCtttt < 3:265192/149‑1 (MQ=255) gACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCtttt < 5:142596/149‑1 (MQ=255) aaaaaaaaaTCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTATAGATCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTTAGTCTGTGATACCTTCGCCAGCGCTTTTGa < 5:374423/148‑1 (MQ=255) aGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGa < 8:289993/149‑1 (MQ=255) aCTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCg < 8:275525/149‑1 (MQ=255) ttGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGga < 5:137536/149‑1 (MQ=255) gATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGgag > 8:308968/1‑148 (MQ=255) aTCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCtt < 8:75334/123‑1 (MQ=255) aTCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCtt > 7:75334/1‑123 (MQ=255) aTGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACAt > 3:190592/1‑149 (MQ=255) tGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACAtg < 5:138548/149‑1 (MQ=255) tGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACAtg < 4:188314/149‑1 (MQ=255) gCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCgg < 3:221626/140‑1 (MQ=255) gCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCgg > 4:221626/1‑140 (MQ=255) gCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACAtgg > 6:279834/1‑149 (MQ=255) aaaaGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACAtggtg > 5:224191/1‑149 (MQ=255) acgCTCACGTCTTCTAGG‑CGGATGTAGAGACCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGGGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGc < 4:261555/147‑1 (MQ=255) aCGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAg > 8:187728/1‑80 (MQ=255) aCGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAg < 7:187728/80‑1 (MQ=255) aCGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGa > 1:210692/1‑112 (MQ=255) aCGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGa < 2:210692/112‑1 (MQ=255) aCGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAActc > 5:334534/1‑149 (MQ=255) aCGGATTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAAct < 8:309070/148‑1 (MQ=255) ggTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAActctc < 7:308968/149‑1 (MQ=255) gTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAActctct < 6:224191/149‑1 (MQ=255) tATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGa > 5:265818/1‑147 (MQ=255) g‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCt > 4:332278/1‑149 (MQ=255) ggATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCtt > 5:372341/1‑148 (MQ=255) gATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTa > 6:86089/1‑149 (MQ=255) agagagCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGtt > 2:331416/1‑149 (MQ=255) gCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGa > 3:87956/1‑149 (MQ=255) ccAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGAc < 5:279834/149‑1 (MQ=255) cAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATAc < 8:133744/68‑1 (MQ=255) cAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATAc > 7:133744/1‑68 (MQ=255) tCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCa > 6:343178/1‑149 (MQ=255) tCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCa > 5:381633/1‑149 (MQ=255) tCAAAGGCATGAAAATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTATCTCGATAGCTTTATCGTTCCTGACAAACATCGCCa > 4:344887/1‑149 (MQ=255) aaaGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCAt > 2:374590/1‑148 (MQ=255) ttggCATGATGTTCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATa > 7:6085/3‑148 (MQ=255) ggCATGATGTTCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATaaaa > 3:340639/1‑149 (MQ=255) aTGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCAATTGACTACATCGCTAGACACGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTACTGACAAACATAGCCATAAAAcag > 1:311414/1‑147 (MQ=255) | CTACGGCAATGGCCAAAGGCTTAAGCTCTTGGAAAGCCACAGAGAGGGTGGCGCCACGACAAAAAAAATCTGAGCGACTTGATCATGCAAAAGCTCACGGTTTCTATG‑CGGATGTAGAGAGCCAATGACTACTCAAAGGCATGAACATCATGCCAACTGCTCGATGGTAGCTCTAGTGAGTCTGTGATACCTTCGCCAGCGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCG > NC_002947/4936773‑4937061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |