| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,970,517 | T→A | 6.7% | intergenic (‑275/+119) | fliC ← / ← PP_4379 | flagellin/3‑oxoacyl‑ACP synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,970,517 | 0 | T | A | 6.7% | 207.4 / 2.4 | 69 | intergenic (‑275/+119) | fliC/PP_4379 | flagellin/3‑oxoacyl‑ACP synthase |
| Reads supporting (aligned to +/- strand): ref base T (31/33); new base A (3/2); total (34/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.26e-01 | |||||||||||
GCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACAGGATGGCCGAGCCC > NC_002947/4970375‑4970663 | gCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGgt < 5:94221/149‑1 (MQ=255)gCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGgt > 2:179262/1‑149 (MQ=255) aTGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCAAAGCCGgtgc < 1:369391/149‑2 (MQ=255) ggggCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTc > 5:362905/1‑149 (MQ=255) ggggCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCAAAGCCGgtg < 1:217035/146‑1 (MQ=255) ggggCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCAAAGCCGgtg > 2:217035/1‑146 (MQ=255) ggCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTcgc > 7:247171/1‑149 (MQ=255) gCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTcgcg > 8:132096/1‑149 (MQ=255) ccAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCgg < 6:362905/149‑1 (MQ=255) aGCCCTTATAATTCTTGGTGTTAAGTGCTGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGTTGGAGCGGGTGTGGCTGTGAAGATGTTGACGCGTTGGGTGGTTCCGGCTTTGCCGGTGTTCGCGGGt < 7:243331/149‑1 (MQ=255) cTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGTATGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGaa > 1:106366/1‑149 (MQ=255) cTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAAc > 1:258181/1‑149 (MQ=255) tGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAAcc > 4:231710/1‑149 (MQ=255) gagaAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAAccc > 6:28651/1‑149 (MQ=255) gaAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGc < 8:359593/149‑1 (MQ=255) aaTCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTc < 2:258181/149‑1 (MQ=255) aaTCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTc < 5:28651/149‑1 (MQ=255) aTCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTcc < 8:313721/149‑1 (MQ=255) aTCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTcc > 7:313721/1‑149 (MQ=255) aaGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTa < 6:351207/148‑1 (MQ=255) gTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATgg > 5:374045/1‑149 (MQ=255) gTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATgg > 7:188319/1‑149 (MQ=255) ttAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATggg < 3:269007/149‑1 (MQ=255) gggCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGc < 5:215504/149‑1 (MQ=255) gggCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGc > 5:177387/1‑149 (MQ=255) tttATTGGCGTCATAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAgg < 7:132096/149‑1 (MQ=255) aTTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAgg > 6:90496/1‑146 (MQ=255) gTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCtt < 2:161839/149‑1 (MQ=255) gTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCt > 4:147916/1‑148 (MQ=255) aaaCTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTAtttt < 7:29569/149‑1 (MQ=255) aaCTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTc < 3:141876/149‑1 (MQ=255) aaCTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTc < 2:103962/149‑1 (MQ=255) aCTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCg < 6:177387/149‑1 (MQ=255) aaCTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGaaa > 2:21550/1‑148 (MQ=255) aCTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGCGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGaaaa > 2:122362/1‑148 (MQ=255) gg‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGaaaaaaaa < 3:231710/148‑1 (MQ=255) gg‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAg > 2:366627/1‑149 (MQ=255) gCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGATGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCCCTCCTACAATGGGCTCCGTTAGGCAGAAGCTTATTTTCGGCAG‑AAAAAAACCGCCGGGCg > 3:224292/1‑149 (MQ=38) cTCATCCCGTCGGTGGAGCGGGTGAGGCTGGGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCgg > 1:34398/1‑149 (MQ=255) cATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTg > 8:318288/1‑149 (MQ=255) aTCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGt < 8:131044/147‑1 (MQ=255) cccGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGgcc > 5:88442/1‑149 (MQ=255) ccGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGgcc < 1:21550/148‑1 (MQ=255) gTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGgccgcc > 6:40574/1‑149 (MQ=255) tGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGgcg > 7:170280/1‑149 (MQ=255) gAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCt > 6:221892/1‑149 (MQ=255) gAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCt < 2:106366/149‑1 (MQ=255) gAGCGGGTGAGGCTGCGAAGAAGGAGACGCGACGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCt > 4:200509/1‑149 (MQ=255) aGCGGGGGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCtt < 8:247171/149‑1 (MQ=255) cGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCttt < 2:34398/148‑1 (MQ=255) tGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAggg < 1:179262/149‑1 (MQ=255) gaagaaGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTgg < 6:88442/149‑1 (MQ=255) gaagaaGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTgg > 7:335471/1‑149 (MQ=255) caaccagGAGACGCGAGGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGGTTGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCCGGCGGCCACCGCCCGGCGCttttt < 5:128705/132‑2 (MQ=25) aagaagGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTggg < 2:258530/149‑1 (MQ=255) gaagGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGAt < 7:318288/149‑1 (MQ=255) gagaCGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCGTATTTTCGGCAGAAAAAAAAGAGCCGGGCCGTGGCCGCCGGGCGCATTTAGGGGCTGACTGGGATCAGt > 8:166608/1‑149 (MQ=255) agaCGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGTCTGACTGGGATCAGTc > 4:76281/1‑149 (MQ=255) gaCGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTcg > 2:276585/1‑149 (MQ=255) tGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACa < 6:374045/149‑1 (MQ=255) cgcgaacACCGGCAAAGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACAg > 1:197442/7‑149 (MQ=39) ggTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACAg < 5:40574/148‑1 (MQ=255) gcgaacACCGGCAAAGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACAg > 8:215621/6‑148 (MQ=255) tGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACAGGAt > 4:104536/1‑149 (MQ=255) tGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACAGGAt > 7:91875/1‑149 (MQ=255) aCCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACAGGATGGcc < 3:200509/149‑1 (MQ=255) cGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACAGGATGGCCGa < 5:90496/149‑1 (MQ=255) gCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCGGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACAGGATGGCCGAGc < 7:276400/149‑1 (MQ=255) cTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACAGGATGGCCGAGcc < 1:366627/149‑1 (MQ=255) tttGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACAGGATGGCCGAGccc < 8:170280/149‑1 (MQ=255) | GCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGG‑CTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTGGCCGCCGGGCGCTTTTAGGGGCTGACTGGGATCAGTCGCGGTACAGGATGGCCGAGCCC > NC_002947/4970375‑4970663 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |