| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 353,791 | C→T | 7.4% | R180Q (CGG→CAG) ‡ | cbcV ← | choline/betaine/carnitine ABC transporter ATP binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 353,791 | 0 | C | T | 7.4% | 191.2 / 4.2 | 67 | R180Q (CGG→CAG) ‡ | cbcV | choline/betaine/carnitine ABC transporter ATP binding protein |
| Reads supporting (aligned to +/- strand): ref base C (31/31); new base T (3/2); total (34/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.99e-01 | |||||||||||
GTCCAGGTCGTGGCTGACGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAGGCCGAAGC > NC_002947/353643‑353938 | gTCCAGGTCGTGGCTGACGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGccc < 1:141287/149‑1 (MQ=255) cAGGTCGTGGCTGACGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCgg < 6:173523/148‑1 (MQ=255) gCTGACGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTAGTCCATAAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCa > 5:118988/1‑149 (MQ=255) cTGACGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCAc < 8:296003/149‑1 (MQ=255) cGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACgcgc < 8:69738/149‑1 (MQ=255) gAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCgct > 1:211282/1‑149 (MQ=255) gAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCgct > 7:309100/1‑149 (MQ=255) acacGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCGTGGG‑CCTGGCCCGGGCgctgg < 4:300345/149‑2 (MQ=255) acacGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCgctgc < 2:211282/149‑1 (MQ=255) acGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGctgctg > 5:72835/1‑149 (MQ=255) gATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCa > 6:237210/1‑149 (MQ=255) gATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCa < 4:156794/149‑1 (MQ=255) ttGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATgccgc < 3:379939/148‑1 (MQ=255) cTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAg < 8:309100/148‑1 (MQ=255) tCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGa > 1:293002/1‑148 (MQ=255) tgCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAg > 3:114682/2‑149 (MQ=255) aGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAg < 1:152934/149‑1 (MQ=255) aGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAg > 6:381439/1‑149 (MQ=255) cTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGc > 5:230789/1‑148 (MQ=255) cTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGc < 4:114682/148‑1 (MQ=255) ggCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTc < 8:288900/147‑1 (MQ=255) ggCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCAt > 8:206081/1‑149 (MQ=255) cTGCAGGCCAAGCAGCTCATCTTGCAGGGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATcc > 1:3751/1‑149 (MQ=255) cAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑c > 3:181532/1‑105 (MQ=255) cAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑c < 4:181532/105‑1 (MQ=255) cAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCttg > 4:184569/1‑149 (MQ=255) cagcTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTgc < 2:293002/149‑1 (MQ=255) acATCTAGCA‑GGCCCTGGCGGATCAGTGGATCCACGGCCCACAACCGAACGTACAACAGCAGGATGTCCTCATCCATCCCCAGCGCCCCGG‑CCAGGCACACCCGCAGCTGCATGCCGACACAAAGCTCATCCGGCTTATTGTTgcgca > 4:234100/2‑147 (MQ=255) tCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTg > 3:353233/1‑149 (MQ=255) a‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATACCGCCAGAAAGCTCATCCGGCTTCGTGTGTCGCGCCTGGGGCAg > 8:170926/1‑149 (MQ=255) gCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGGATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGc < 1:91590/149‑1 (MQ=255) gCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCTgg < 6:230789/148‑1 (MQ=255) gCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCccacc < 5:237210/148‑1 (MQ=255) ggATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGc > 8:30855/1‑149 (MQ=255) aTCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGTG‑CGAGGCCCACGAGCTGCTGCATGCCGCCTGAAAGCTCATCCGGCTTCTTCTTGCGCCACTGGGTCAGGCCCACCAGATc < 2:308449/149‑1 (MQ=255) aTCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTc < 4:209893/149‑1 (MQ=255) gTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGaaa < 2:268775/99‑1 (MQ=255) gTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGaaa > 1:268775/1‑99 (MQ=255) ggATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGGTCCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCt > 1:310766/1‑149 (MQ=255) gATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTtc < 5:381439/149‑1 (MQ=255) gATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTtc < 3:234100/149‑1 (MQ=255) tCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTtctc < 2:3751/149‑1 (MQ=255) ggCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGa < 6:72835/149‑1 (MQ=255) gCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGAc < 4:169824/149‑1 (MQ=255) cgttaaCGGTTCGCCCATCCGCCGGAGGTCGGCAT‑CATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAg < 2:256754/145‑1 (MQ=255) gaACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCt > 8:358490/1‑149 (MQ=255) cGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTgc > 8:255489/1‑149 (MQ=255) ggTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTgcg < 6:118988/149‑1 (MQ=255) gTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGtt < 7:358490/149‑1 (MQ=255) tCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTc > 3:121276/1‑149 (MQ=255) cATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCt > 2:123603/1‑149 (MQ=255) agcagGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTc < 3:8940/149‑1 (MQ=255) ggATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCggg > 7:213027/1‑149 (MQ=255) gTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGAc > 7:261320/1‑149 (MQ=255) tCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGAcc < 7:231469/149‑1 (MQ=255) gCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTCTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTg < 1:123603/149‑1 (MQ=255) ccatcGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCCGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCAtt > 7:339506/1‑149 (MQ=255) catgcagcAGCGCGTGGG‑CCTGGCCCGGGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTACCTTTTCCGGGCGACCCTGCAtt > 8:209198/8‑149 (MQ=255) catcGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCAtt > 6:367547/1‑148 (MQ=255) tgcagcAGCGCGTGGG‑CCTGGCCCGGGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCggg < 3:316843/130‑1 (MQ=255) tgcagcAGCGCGTGGG‑CCTGGCCCGGGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCggg > 4:316843/6‑135 (MQ=255) atcGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGAATTTc > 5:337946/1‑149 (MQ=255) gCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCa < 7:206081/148‑1 (MQ=255) cAGCGCGTGGG‑CCTGGCCCGGGCGCTGCTGCAAGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCAACCAGCTCCAGCTTCTCGTCGACCAGCTTTCGCCGTTCCTTTTACGGGCGACCCGGCATTTACAGGc > 4:382341/1‑149 (MQ=255) cAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAGGc < 7:255489/149‑1 (MQ=255) gcgcCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCATGCCCACCAGCTCAAGCTTCTCGACGACCCCCTTGCGCCGTTCCTTTTCAGCGCTACCCTGCATGTCCatgac > 8:347795/1‑144 (MQ=255) gcgcCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAGGcc > 4:202625/1‑148 (MQ=255) gcCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCCGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAGGCCg > 4:258305/1‑147 (MQ=255) ccGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAGGCCGAAGc > 5:105504/1‑149 (MQ=255) | GTCCAGGTCGTGGCTGACGAACACGATGGTTTTGCTCAGCTTGGCCTGCAGGCCAAGCAGCTCATCTTGCA‑GGCCCTGGCGGATCAGTGGATCCAGGGCCGAGAACGGTTCGTCCATCAGCAGGATGTCGGCATCCATCGCCAGCGCCCGGG‑CCAGGCCCACGCGCTGCTGCATGCCGCCAGAAAGCTCATCCGGCTTCTTGTTGCGCCACTGGGTCAGGCCCACCAGCTCAAGCTTCTCGTCGACCAGCTTGCGCCGTTCCTTTTCCGGGCGACCCTGCATTTCCAGGCCGAAGC > NC_002947/353643‑353938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |