| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,149,444 | C→T | 7.1% | intergenic (‑430/+18) | PP_mr51 ← / ← PP_4535 | C4 ncRNA/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,149,444 | 0 | C | T | 7.1% | 203.7 / 4.3 | 70 | intergenic (‑430/+18) | PP_mr51/PP_4535 | C4 ncRNA/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (38/27); new base T (3/2); total (41/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.90e-01 | |||||||||||
CGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCT > NC_002947/5149298‑5149589 | cgcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATccccccc > 2:99556/1‑149 (MQ=255) gcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTAGACGCCGC‑ACGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCATTCCTCATACA‑AGTTCAAACCAGGAGGCTATCCCCCCCt > 6:357481/1‑149 (MQ=255) gTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTgg > 2:147035/1‑149 (MQ=255) cTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGtt < 5:316724/149‑1 (MQ=255) ttGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCATGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTg > 3:331188/1‑149 (MQ=255) ttGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑ATTTCCAACCAGGGGGGGATAGCCTCCTGGtt < 8:237509/148‑1 (MQ=255) gAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTgg < 6:236928/148‑1 (MQ=255) gAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTAT‑CCCCCCTGGTTgg < 7:80629/147‑1 (MQ=255) aGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCACAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTgg < 1:52636/148‑1 (MQ=255) aGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGaa < 4:372014/149‑1 (MQ=255) gCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACtt > 7:305088/1‑148 (MQ=255) tgCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGt > 5:186861/1‑148 (MQ=255) aTGACCACCACCATTCAGACGCATAATACATAATCTGTCCACGCCGC‑CCGCCATATCTTCGCCTCTACTTCAGTTTCCAAGGCCATCCTCATCCA‑AGCTCCATCCACGCGGCTATCCCCCCCTGGTTGGAACTTCATTTACTCCGCAAt < 6:390971/149‑1 (MQ=255) tGACCACGAGCAATCAGACGCATAATACATAATGTGTCCATGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATc < 4:331188/149‑1 (MQ=255) tGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGCGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAAt > 6:260178/1‑148 (MQ=255) aCCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAAt > 2:207831/1‑146 (MQ=255) aaTCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGt > 3:259208/1‑149 (MQ=255) aGACTCATAATACATAATGTGTCCACGCCTC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTtctc < 3:10952/149‑1 (MQ=255) aGACGCATAATACATAATGTGTCCACGCCGCTCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGGGGGGATAGCCTCCTGGtt > 1:238289/1‑112 (MQ=37) aGACGAATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGGGGGGATAGCCTCCTGGtt < 2:238289/111‑1 (MQ=37) aCGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCa > 1:220040/1‑149 (MQ=255) aTAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGCCCGCGCGTTCTCCACCGAGCGCggc > 2:126724/1‑148 (MQ=255) aTAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGa < 2:220040/149‑1 (MQ=255) gtgtCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAg > 8:168523/1‑149 (MQ=255) gtgtCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACAGCGCGTTCTCCACCGAGCGCGGACGAAg > 8:119341/1‑149 (MQ=255) tCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTc > 8:183678/1‑148 (MQ=255) aCGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGCGGCTATCCCCCCCTGGTTGGAACTTCCGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTc > 8:72295/1‑148 (MQ=255) c‑ccgccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACa < 4:259208/149‑1 (MQ=255) ccaatatCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAg < 3:314709/146‑1 (MQ=255) ccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGt > 4:110188/1‑149 (MQ=255) cATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGtt < 7:119341/149‑1 (MQ=255) tCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGcc < 1:207831/148‑1 (MQ=255) cTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCt > 6:26533/1‑149 (MQ=255) cTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCt > 3:282893/1‑149 (MQ=255) ttGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTg > 3:318628/1‑149 (MQ=255) ggCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGc < 7:183678/148‑1 (MQ=255) gCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCATGCaa > 3:140218/1‑149 (MQ=255) ttCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAg > 8:210279/1‑130 (MQ=255) ttCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACg > 2:189186/1‑149 (MQ=255) tCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACa < 4:155005/132‑1 (MQ=255) tCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACa > 3:155005/1‑132 (MQ=255) aaCTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGc < 5:229419/148‑1 (MQ=255) ttCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGc > 4:339673/1‑149 (MQ=255) ccAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTc < 8:306649/112‑1 (MQ=255) ccAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCcgcg > 6:214480/1‑149 (MQ=255) cAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGt > 4:269528/1‑149 (MQ=255) cAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCg < 1:99556/149‑1 (MQ=255) atgctctTCCT‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTTGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTGCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCa < 8:305088/146‑1 (MQ=255) tCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTGCAGGTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCg > 2:262568/1‑146 (MQ=255) cTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGa > 2:35358/1‑148 (MQ=255) cTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGa < 5:26533/148‑1 (MQ=255) cATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACaa > 5:393496/1‑149 (MQ=255) actga‑aGTTCCAACCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCCCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAAt > 8:157682/5‑149 (MQ=38) tCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCAt > 5:140918/1‑129 (MQ=255) tCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCAt < 6:140918/129‑1 (MQ=255) tCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATg > 3:59280/1‑149 (MQ=255) cA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTCCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa < 3:110188/148‑1 (MQ=255) a‑aGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACTAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAtt < 7:168523/149‑1 (MQ=255) ttCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGc < 1:147035/149‑1 (MQ=255) tCCAACCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCg > 8:105374/1‑149 (MQ=39) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCt > 1:313492/1‑149 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCATGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCt > 4:17572/1‑149 (MQ=255) aCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 3:216613/1‑149 (MQ=255) ggaggCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACg > 3:55431/1‑149 (MQ=255) gaggCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGc > 4:90622/1‑149 (MQ=255) gaggCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGc < 6:393496/149‑1 (MQ=255) ggCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCg > 8:313872/1‑149 (MQ=255) gCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCgg > 7:158611/1‑149 (MQ=255) tATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGtt > 7:73517/1‑149 (MQ=255) tCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGtt < 8:73517/147‑1 (MQ=255) tCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTc < 8:71436/149‑1 (MQ=255) ccccccTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGTGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCt < 6:186861/149‑1 (MQ=255) ccccccTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCt < 4:216613/149‑1 (MQ=255) caccccTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACGGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCt < 5:357481/147‑1 (MQ=255) | CGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGC‑CCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCA‑AGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCT > NC_002947/5149298‑5149589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |