| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,300,298 | A→G | 5.5% | L1159L (TTG→CTG) ‡ | recB ← | Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,300,298 | 0 | A | G | 5.5% | 215.2 / 2.3 | 73 | L1159L (TTG→CTG) ‡ | recB | Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease |
| Reads supporting (aligned to +/- strand): ref base A (32/37); new base G (2/2); total (34/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.25e-01 | |||||||||||
CGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCGGTCACGTAGTAACGCCCGTC > NC_002947/5300150‑5300445 | cGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCaa < 2:124407/149‑1 (MQ=255) aCAGCGCATCGAGGCTTTCGATCAGCTCAAGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCTCCGCCAACATGGCTGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTgg < 5:103813/149‑1 (MQ=255) aGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGTTGCGCGCGCGGCTGGCg < 6:362093/149‑1 (MQ=255) gcgcATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCgg > 2:245609/1‑149 (MQ=255) cgcATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGt > 4:294508/1‑149 (MQ=255) aTCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCa < 2:315947/149‑1 (MQ=255) gAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAggg < 8:359096/149‑1 (MQ=255) gAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAgg < 6:340538/148‑1 (MQ=255) gAGGCTTTCGATCAGCTAACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAgg > 5:340538/1‑148 (MQ=255) gATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGt < 3:294508/149‑1 (MQ=255) aTCAGCACACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTa > 3:127632/1‑149 (MQ=255) tCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTa > 8:2615/1‑148 (MQ=255) aGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACa < 5:16533/148‑1 (MQ=255) gCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCACGCGCGCAACTGGCGGTGCa > 3:172057/1‑132 (MQ=255) gCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCACGCGCGCAACTGGCGGTGCa < 4:172057/132‑1 (MQ=255) tCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCACCCCCGCGCGCAACAGGCGGTGCAGGGCCAGCAGGTACAGca > 4:82058/1‑148 (MQ=255) aCGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCg > 8:213280/1‑123 (MQ=255) aCGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCg < 7:213280/123‑1 (MQ=255) cgcgGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATa < 1:100229/149‑1 (MQ=255) ggTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCaa > 8:136603/1‑113 (MQ=255) ggTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTg < 7:2615/149‑1 (MQ=255) tGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGC‑‑CGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAgg > 5:243079/1‑149 (MQ=255) ggCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAg < 8:30737/149‑1 (MQ=255) gCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCTCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAgg < 3:82058/149‑1 (MQ=255) cTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGt < 8:21380/149‑1 (MQ=255) ttGGCGTGGTACACTCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAATATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTc < 3:166998/149‑1 (MQ=255) ttGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGATCAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTc < 3:172927/149‑1 (MQ=255) cGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGC‑‑CGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCg < 6:243079/149‑1 (MQ=255) acacGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGTTGCGCGCGCGGCTGGc > 6:256809/1‑102 (MQ=255) acacGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGTTGCGCGCGCGGCTGGc < 5:256809/102‑1 (MQ=255) acacGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTAAAGCACATACGGCAGGTCGTAGCGGTGc > 3:76234/1‑149 (MQ=255) tGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAAt > 5:383074/1‑149 (MQ=255) tGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAAt < 1:245609/149‑1 (MQ=255) gCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATc < 1:176007/148‑1 (MQ=255) cGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCg > 2:246098/1‑133 (MQ=255) cGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCg < 1:246098/133‑1 (MQ=255) cGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGcc > 1:70980/1‑149 (MQ=255) gctgctgctGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCt > 5:168684/1‑149 (MQ=255) gctgctgctGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCt > 4:253514/1‑149 (MQ=255) tgctgctgGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑c < 7:7022/136‑1 (MQ=255) tgctgctgGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑c > 8:7022/1‑136 (MQ=255) gCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTccatggc > 3:254752/1‑149 (MQ=255) aCCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTccatgtcca > 4:347684/1‑149 (MQ=255) aCCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTccatggcca > 3:76692/1‑149 (MQ=255) cgcAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCcatggccatggc < 4:127632/149‑1 (MQ=255) gcAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCa > 7:348832/1‑149 (MQ=255) aGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGACCATGGCATc < 2:70980/149‑1 (MQ=255) gAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCg > 4:186440/1‑148 (MQ=255) aTGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGc < 4:76692/149‑1 (MQ=255) tGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGcc > 2:121761/1‑149 (MQ=255) aaCAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTg < 6:168684/149‑1 (MQ=255) aaCACGGCTCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTg < 8:274084/149‑1 (MQ=255) aGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCGGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGAt < 7:159464/149‑1 (MQ=255) gcgcCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTc > 4:96483/1‑149 (MQ=255) gccAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCAc < 6:383074/149‑1 (MQ=255) aaCATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAAGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACcca > 4:293872/1‑149 (MQ=255) ggTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCa > 3:47514/1‑137 (MQ=255) ggTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCa < 4:47514/137‑1 (MQ=255) cATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGAc < 2:254489/149‑1 (MQ=255) aaTCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCCCATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGGCTGGATGTCCGCCCCCCGCCAGTTGGACTTg > 2:133761/1‑149 (MQ=255) aaTCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGCCTTg > 5:384278/1‑149 (MQ=255) aaTCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTg > 4:193018/1‑149 (MQ=255) aTCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCATCAGGTACATCAAATATTGCAGGTCGTAGGGGTGCTCCAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTg < 1:121761/149‑1 (MQ=255) aTCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTg > 3:305471/1‑148 (MQ=255) aTCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAAGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTg < 3:293872/148‑1 (MQ=255) tCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCcagcag > 2:322940/1‑47 (MQ=255) tCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCcagcag < 1:322940/47‑1 (MQ=255) tCGCAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCCCCCAGCCAGATGGACTTg > 8:237134/1‑147 (MQ=255) gTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCgg < 4:305471/149‑1 (MQ=255) caccAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCAGCCAGCCAGTTGGACTTGTAGTCGGTCa > 4:146667/3‑149 (MQ=255) ccagttgcgcgcgcGGCTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCGGTCACg > 7:193456/7‑149 (MQ=255) ccAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCGGTCACg < 3:186440/149‑1 (MQ=255) ccAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCGGTCACg < 3:253514/149‑1 (MQ=255) cgcgcgcgCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCGGTCACgtagta < 5:376425/149‑1 (MQ=255) gcgcgcgcAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCGGTCACGTAGTaa < 8:348832/149‑1 (MQ=255) aaCTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCGGTCACGTAGTAACGCCCGTc > 1:227172/1‑149 (MQ=255) aaCTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCGGTCAAGTAGTAACGCCCGTc > 8:311979/1‑149 (MQ=255) | CGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCT‑CAAGAATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCGGTCACGTAGTAACGCCCGTC > NC_002947/5300150‑5300445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |