| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,338,050 | C→G | 16.2% | intergenic (+57/‑227) | PP_4696 → / → PP_mr53 | nitrogen regulation protein NR(I)/CrcZ ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,338,050 | 0 | C | G | 16.2% | 164.1 / 23.0 | 67 | intergenic (+57/‑227) | PP_4696/PP_mr53 | nitrogen regulation protein NR(I)/CrcZ ncRNA |
| Reads supporting (aligned to +/- strand): ref base C (29/27); new base G (4/7); total (33/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
ACGCAAGCTCGGCGTAAGCCGCAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAATTGCGACATTTTGAA > NC_002947/5337903‑5338194 | aCGCAAGCTCGGCGTAAGCCGCAAGTGCCGTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCgcc‑gcc > 1:29246/1‑149 (MQ=255) ccAAGCTCGGCGTAAGCCGCAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATCCGGCGTCGGTTAGACCGCACGcc‑gcccgc > 7:124826/2‑149 (MQ=255) gCTCGGCGTAAGCCGCAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGGCCGAGCGCC‑GCgcgggcgg < 3:358048/149‑1 (MQ=255) cTCGGCGTAAGCCGCAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCgcggc > 5:276366/1‑149 (MQ=255) ggCGTAAGCCGCAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGGCCGAGCGCC‑GCGCGGGCGGCGCt < 1:94158/149‑1 (MQ=255) ggCGTAAGCCGCAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCGCGGGCGgcgc < 6:381059/148‑1 (MQ=255) gTAAGCCGCAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAATAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCTAGCGCC‑GCCCGCGCGGCGCTCgg < 4:292515/149‑1 (MQ=255) gTAAGCCGCAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCgg < 2:252346/149‑1 (MQ=255) gTAAGCCGCAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCgg < 7:96198/149‑1 (MQ=255) tAAGCCGCAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCTAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGc < 2:29246/149‑1 (MQ=255) gCCGCAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGGCCGAGCGCC‑GCGCGGGCGGCGCTCGGtctc < 2:337025/149‑1 (MQ=255) cAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAg > 6:303522/1‑149 (MQ=255) aGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGGCCGAGCGCC‑GCGCGGGCGGCGCTCGGtctc < 5:29712/143‑1 (MQ=255) aGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGGCCGAGCGCC‑GCGCGGGCGGCGCTCGGtctc > 6:29712/1‑143 (MQ=255) gTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGgcg < 6:391381/149‑1 (MQ=255) gCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCGCGGGCGGCGCTc < 4:305818/134‑1 (MQ=255) gCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCGCGGGCGGCGCTc > 3:305818/1‑134 (MQ=255) tgGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAAc < 3:289832/148‑1 (MQ=255) ggAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACgtg > 1:226014/1‑149 (MQ=255) ggAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACAGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCCCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACgtg > 6:121365/1‑149 (MQ=255) ccgccAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCacga > 5:79361/1‑149 (MQ=255) gccAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGcc < 8:192444/123‑1 (MQ=255) gccAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGcc > 7:192444/1‑123 (MQ=255) gccAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCt < 8:154307/134‑1 (MQ=255) gccAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCt > 7:154307/1‑134 (MQ=255) ccTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACAccc > 7:1066/1‑149 (MQ=255) cTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACAcccc < 6:79361/149‑1 (MQ=255) ggCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACGTACGCACGGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAg < 2:16617/148‑1 (MQ=255) ggCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCa < 2:226014/147‑1 (MQ=255) gCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGt < 7:363215/149‑1 (MQ=255) cACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGt < 7:255070/143‑1 (MQ=255) cACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAAcacc < 6:276366/149‑1 (MQ=255) cACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGCTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGt > 8:255070/1‑143 (MQ=255) aaGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCTGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTcc > 6:388665/1‑149 (MQ=255) gCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGt > 2:266806/1‑148 (MQ=255) aaCGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTaaa < 5:303522/149‑1 (MQ=255) aaCGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTaa > 8:147367/1‑148 (MQ=255) tACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCt > 2:170294/1‑149 (MQ=255) aCCCGCTAATAACCCACCTACCCACCGCACGCCGCCGCCTATGGGGGGTGGTGGAGACCGTGCGCC‑GCGCGGGCGGCGCTCGGCCTGACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTg < 8:124826/149‑1 (MQ=255) cAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCacg < 2:351513/106‑1 (MQ=255) cAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCacg > 1:351513/1‑106 (MQ=255) cAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGt > 2:318782/1‑148 (MQ=255) gCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGCACACCCCAGGTCACCCCTCACCTCCCGTAAAAATCTGTTAc > 6:196983/1‑149 (MQ=255) aTAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCaa < 1:170294/149‑1 (MQ=255) cccACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCtt > 8:20363/1‑149 (MQ=255) cccACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCtt > 4:199508/1‑149 (MQ=255) ccACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAACCttt > 2:351611/1‑149 (MQ=255) aCCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTcc > 7:42563/1‑149 (MQ=255) ccTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGCACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTccg > 5:279089/1‑149 (MQ=255) cgcaccgcacGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGt < 5:121365/149‑1 (MQ=255) caccgcacGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTaa < 8:1066/149‑1 (MQ=255) accgcacGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCCGGCCCGCGCTGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCa > 1:80222/1‑98 (MQ=255) accgcacGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCTGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCa < 2:80222/97‑1 (MQ=255) cacGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTc < 8:42563/149‑1 (MQ=255) cgcAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTcccc > 7:97294/1‑147 (MQ=255) gcAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAg < 8:97294/149‑1 (MQ=255) ccTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCg > 8:340038/1‑148 (MQ=255) aTGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCAAAGCTTTCCGCCGTAACAGTCCCAGAGGCGTACg > 8:175566/1‑149 (MQ=255) tGCGGCTTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACgg < 1:205182/149‑1 (MQ=255) tGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTAc < 5:196983/147‑1 (MQ=255) tGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTAc < 4:87857/147‑1 (MQ=255) gTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCCCCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACg > 6:340915/1‑148 (MQ=255) cGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGaaa > 2:49230/1‑149 (MQ=255) gTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAAtt < 3:199508/149‑1 (MQ=255) gTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAAtt < 1:266806/149‑1 (MQ=255) gaggCCGAGCGCC‑GCGCGGGCGGCGCTCGGTCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAATTGc > 2:21756/1‑149 (MQ=255) agaCCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTACCACCTCCCCTCCCGTAAAAATCTGTAACACAAGCGTACCGCCGTAACAGTCCCCCAGGCGTACCGTAACCAAATTGc > 5:74843/1‑148 (MQ=38) cGAGCGCC‑GCGCGGGCGGCGCTCGGTCTCACCGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAATTg < 2:105385/143‑1 (MQ=255) cGAGCGCC‑GCGCGGGCGGCGCTCGGTCTCACCGGCGCTGAACGTGTCACGACGAACACCCCAGCTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAATTg > 1:105385/1‑143 (MQ=39) cGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAATTGCGACAt > 5:59195/1‑149 (MQ=255) cc‑gcccgcGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCg > 3:303419/1‑116 (MQ=255) cc‑gcccgcGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCg < 4:303419/116‑1 (MQ=255) cc‑gcccgcGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAATTGCGACATTTTGaa < 7:147367/149‑1 (MQ=255) | ACGCAAGCTCGGCGTAAGCCGCAAGTGCC‑TGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGGTGAGACCGAGCGCC‑GCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAATTGCGACATTTTGAA > NC_002947/5337903‑5338194 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |