| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,469,180 | A→T | 5.2% | L273H (CTC→CAC) | mrdB ← | murein transpeptidase factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,469,180 | 0 | A | T | 5.2% | 236.5 / 2.3 | 77 | L273H (CTC→CAC) | mrdB | murein transpeptidase factor |
| Reads supporting (aligned to +/- strand): ref base A (35/38); new base T (2/2); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.67e-01 | |||||||||||
ACAAAAAAAGTCATGGTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGATGATGTTCCAACCGGTGCCCAACGGGT > NC_002947/5469036‑5469324 | aCAAAAAAAGTCATGGTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCAc > 4:6851/1‑149 (MQ=255) aaaaaaaGTCATGGTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACgg > 3:47909/1‑149 (MQ=255) aaaaaaaGTCATGGTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACgg < 6:261304/149‑1 (MQ=255) aaaaaGTCATGGTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGc > 1:234253/1‑148 (MQ=255) aaaGTCATGGTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGTGCTCGGCgag < 3:362332/149‑2 (MQ=255) aaaGTCATGGTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGTGCTCGGCgag < 5:71532/149‑2 (MQ=255) aaaGTCATGGTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCgat < 4:294657/149‑1 (MQ=255) gTCATGGTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCgatgat < 2:304264/149‑1 (MQ=255) gcATGGTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGAAGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCgatcat > 5:292352/2‑148 (MQ=255) aTGGTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGaa < 3:73697/149‑1 (MQ=255) gTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTc > 4:299869/1‑149 (MQ=255) aGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑AGAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGgt < 4:47909/149‑1 (MQ=255) aGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGgt < 1:4946/149‑1 (MQ=255) gCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGgtgt > 8:19055/1‑149 (MQ=255) tGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTgg < 4:210874/149‑1 (MQ=255) cccGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCt > 2:5811/1‑149 (MQ=255) cGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCgatga > 8:47434/1‑131 (MQ=255) cGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCgatga < 7:47434/131‑1 (MQ=255) cGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCttt > 8:44395/1‑149 (MQ=255) gcagcTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCgg > 8:39149/1‑148 (MQ=255) gtGCCGAACAGGGGCTGCGCCTGGGCGGTGAGCACCAGGCCCAGGCCGATCCGCAGCAGGTAG‑ACACTCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCaaaaa < 6:11217/148‑1 (MQ=255) cGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTcc < 3:6851/149‑1 (MQ=255) gAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCCCGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTc > 5:373936/1‑147 (MQ=255) gAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCa < 2:234253/149‑1 (MQ=255) aGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTg > 3:219830/1‑149 (MQ=255) ggTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGc > 8:178193/1‑148 (MQ=255) ggTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCg < 7:44395/149‑1 (MQ=255) gcCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACt < 2:376739/145‑1 (MQ=255) gcCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACt > 1:376739/1‑145 (MQ=255) cTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAGAAGAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTg > 1:275999/1‑149 (MQ=255) cTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGt < 7:178193/147‑1 (MQ=255) ggCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTcc > 2:163532/1‑130 (MQ=255) ggCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTcc < 1:163532/130‑1 (MQ=255) cAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCtt > 7:338683/1‑149 (MQ=255) aGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCttt < 4:317751/149‑1 (MQ=255) ccACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGc > 3:284896/1‑148 (MQ=255) ccACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGc > 3:41984/1‑148 (MQ=255) cACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAAGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGcc > 5:386004/1‑148 (MQ=255) gCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAaca < 1:5811/149‑1 (MQ=255) ccGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAacac < 7:39149/149‑1 (MQ=255) agcagGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACcccgccc > 4:336755/1‑147 (MQ=255) agcagGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACcccgccc < 3:336755/147‑1 (MQ=255) cagGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGc < 4:284896/149‑1 (MQ=255) cagGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGc < 4:41984/149‑1 (MQ=255) aG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGc < 7:73826/144‑1 (MQ=255) aG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGc > 8:73826/1‑144 (MQ=255) aG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATc > 2:294051/1‑149 (MQ=255) tCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAAGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCgccgcc < 6:386004/149‑1 (MQ=255) aggcagATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTg < 2:26170/149‑1 (MQ=255) ggcagATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTgg < 8:338683/149‑1 (MQ=255) gcagATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGga < 4:219830/149‑1 (MQ=255) gATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGgatga > 5:253109/1‑149 (MQ=255) tGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGatgatg < 3:377704/149‑1 (MQ=255) tGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGAAGAAGAAGTCGGAGTGGCTTTCCGGCAAAAAGTCCACGTGCGACTGCGTGCCAAGCCGCCAGCCTTTGCCAAACACCCCGCCCGACCCCATCGCCGCCTTGGACAGCatgatg > 5:59920/1‑149 (MQ=255) cTACCAGGCCGTAGTCCTCGCCGAGCTCGGCGTTGAGGTAGGCGGTGTGGCTGTCCGGCAAACAGTCCAGGTGCGACTGCGTGCCAAGCAGGCTGCGTTTGCCTAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGATGATGTTc < 6:59920/149‑1 (MQ=255) aCCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACcccgc < 6:320232/112‑1 (MQ=255) ggCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGATGATGTTCCAACCg < 7:19055/149‑1 (MQ=255) gCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAGAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGgatg > 1:161210/1‑136 (MQ=255) gCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAGAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGgatg < 2:161210/136‑1 (MQ=255) cGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGATGATGTTCCAACCGGTg > 5:380561/1‑149 (MQ=255) cGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGATGATGTTCCAACCGGTg < 3:299869/149‑1 (MQ=255) gAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGATGATGTTCCAACCGGTGc > 4:92743/1‑149 (MQ=255) aTTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGatgatg > 8:290526/1‑134 (MQ=255) aTTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGatgatg < 7:290526/134‑1 (MQ=255) ttCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGATGATGTTCCAACCGGTGccc > 1:86226/1‑148 (MQ=255) tCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAagc < 3:200155/75‑1 (MQ=255) tCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAagc > 4:200155/1‑75 (MQ=255) tCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGATGATGTTCCAACCGGTGCCCaa > 4:296717/1‑149 (MQ=255) catCGCCGTGCTCAGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGATGATGTTCCAACCGGTGCCCAAc > 2:326766/3‑149 (MQ=255) cTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTg > 6:38760/1‑118 (MQ=255) cTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTg < 5:38760/118‑1 (MQ=255) atCGCCGTGCTCGGCGATGATGAAGTCTGTGTGGCTTTCAGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGCATGATGTTCCAACCGGTGCCAAACg > 7:192743/2‑149 (MQ=255) tCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATc > 1:155179/1‑108 (MQ=255) tCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATc < 2:155179/108‑1 (MQ=255) tCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGga < 6:184547/124‑1 (MQ=255) tCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGga > 5:184547/1‑124 (MQ=255) gCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGATGATGTTCCAACCGGTGCCCAACGGGt < 1:294051/149‑1 (MQ=255) | ACAAAAAAAGTCATGGTCAGGCTGCCCGCAAGCAGCTTGCCGAACAGGGTCTGCGCCTGGGCGGTGATCACCAGGCCACGGCCGATCAGCAGCAGGTAG‑ACAATCAGCAGCAGGCAGATGCCTACCAGGCCGAATTCCTCGCCGAGCACGGCGATGATGAAGTCGGTGTGGCTTTCCGGCAAAAAGTCCAGGTGCGACTGCGTGCCAAGCAGCCAGCCTTTGCCAAACACCCCGCCCGAGCCGATCGCCGCCTTGGACTGGATGATGTTCCAACCGGTGCCCAACGGGT > NC_002947/5469036‑5469324 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |