| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,597,890 | A→G | 5.6% | D464G (GAC→GGC) ‡ | PP_4923 → | outer membrane efflux protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,597,890 | 0 | A | G | 5.6% | 265.4 / 4.3 | 89 | D464G (GAC→GGC) ‡ | PP_4923 | outer membrane efflux protein |
| Reads supporting (aligned to +/- strand): ref base A (45/38); new base G (3/2); total (49/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.72e-01 | |||||||||||
GCGACTACAACAATAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGATAGGCCTTCAATA > NC_002947/5597743‑5598038 | gcgACTACAACAATAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGAc < 1:146884/149‑1 (MQ=255)gcgACTACAACAATAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGAc > 5:135871/1‑149 (MQ=255)gcgACTACAACAATAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGAc > 3:187172/1‑149 (MQ=255) cgACTACAACAATAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGAcc > 2:210338/1‑149 (MQ=255) gACTACAACAATAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCt > 5:337528/1‑149 (MQ=255) gACTACAACAATAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCt > 1:38682/1‑149 (MQ=255) cTACAACAATAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTgg < 1:210338/149‑1 (MQ=255) cTACAACAATAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTgg < 6:135871/149‑1 (MQ=255) aacaaTAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAACCCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTggcgg > 6:303968/1‑148 (MQ=255) caaTAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGgcag < 1:345803/149‑1 (MQ=255) tAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGcagcag > 8:57060/1‑149 (MQ=255) ttACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGcc > 8:309921/1‑148 (MQ=255) ttACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTCACT‑AC‑AACCCGGACAAG‑‑‑GACTTCATGCCGCCGGACCTGGCGGCAGCAGCGGcc > 3:121124/1‑148 (MQ=255) aCGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCaa < 2:36679/148‑1 (MQ=255) gACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGa > 7:117945/1‑148 (MQ=255) cTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCACAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACt > 1:274705/1‑149 (MQ=255) tACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCAGGACAAG‑‑‑GACTTCCTGCCGCAGGCCCTGGCGGCCGCAGCGGCCATGAAcgt > 8:185970/1‑147 (MQ=255) cATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTc < 7:57060/148‑1 (MQ=255) cATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTc < 2:38682/148‑1 (MQ=255) tcGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCAGGTCCGGCGgcaggaa < 8:147062/129‑4 (MQ=255) tcGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCAGGTCCGGCGgcaggaa > 7:147062/1‑126 (MQ=255) tcGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCAGGTCCGGCGgcag > 2:348406/1‑126 (MQ=255) tcGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCAGGTCCGGCGgcag < 1:348406/126‑1 (MQ=255) gACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTc < 1:46817/141‑1 (MQ=255) gACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTc > 2:46817/1‑141 (MQ=255) gACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAg < 3:265289/149‑1 (MQ=255) ccTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCtt > 5:27890/1‑149 (MQ=255) gtgtgCCTGAAGCAGGCAGCCTGCACCCTGAGCCCGCAAGACCTGCAGGAACTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCTGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGGAGCGGCCAAGTACTTCGAGCGCAGGCGtt < 4:121124/144‑1 (MQ=255) gAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCtt > 3:327122/1‑146 (MQ=255) aGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTgaga < 5:283781/149‑1 (MQ=255) aGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTga < 4:262979/147‑1 (MQ=255) tGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGa < 1:24704/130‑1 (MQ=255) tGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGa > 2:24704/1‑130 (MQ=255) aaGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAggg < 4:176026/148‑1 (MQ=255) aaGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAgg < 6:337528/147‑1 (MQ=255) caggcagCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTg > 1:224302/1‑149 (MQ=255) gcagCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGAc > 1:319281/1‑149 (MQ=255) gcagCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGAc > 3:313389/1‑149 (MQ=255) ccGGCCCCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACTCGCGAACCCGGACACGCCCTACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGa < 1:121722/149‑1 (MQ=255) cGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTc < 8:116982/149‑1 (MQ=255) ggCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTcg > 7:290196/1‑149 (MQ=255) aCCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCgg < 2:274705/149‑1 (MQ=255) gCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAACCCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCTGACCTGGCGGCAGAAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGcc < 8:280361/149‑1 (MQ=255) ccGCAAGACCTGCAGGACCTGAAGCGCTACCAGAAACCTGACA‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACATCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCg > 3:348077/1‑149 (MQ=255) aaGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTcc > 3:75597/1‑149 (MQ=255) aaGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCAAGCCCGcgaa < 6:41220/149‑4 (MQ=255) ccTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCcaca > 2:372167/1‑149 (MQ=255) cTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCacac > 7:113357/1‑149 (MQ=255) tGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGTGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACg > 3:224306/1‑149 (MQ=255) cAGGACCTGAAGCGCTACCTGAAACATGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGt > 6:365833/1‑149 (MQ=255) cTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAgg < 2:319281/149‑1 (MQ=255) cTGAAGCGCTACC‑GAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAgg > 5:180159/1‑148 (MQ=255) gAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGcc > 7:71333/1‑149 (MQ=255) gAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGcc > 3:225938/1‑149 (MQ=255) aaGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGATTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCt > 4:195189/1‑149 (MQ=255) aaGCGCTACC‑GAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCt < 6:180159/148‑1 (MQ=255) gcgcTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCGTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGa < 5:303968/149‑1 (MQ=255) cTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTcgcg < 4:257152/113‑1 (MQ=255) cTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTcgcg > 3:257152/1‑113 (MQ=255) tACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAgg > 5:164845/1‑148 (MQ=255) ccTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGATTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGc < 3:195189/147‑1 (MQ=255) cTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGc < 7:73841/138‑1 (MQ=255) cTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGc > 8:73841/1‑138 (MQ=255) cTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCat > 3:319405/1‑148 (MQ=255) gAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCatgac > 2:82910/1‑148 (MQ=255) aCCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACATCGAGCGCAGCCCATGAGATAGCGGCTGGACTCTTCGCGGGCTTGCACGCTCCCACACCGAGCCAGGCCTCAAGGCATGATGCa > 2:313842/1‑149 (MQ=255) ccTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCAc < 1:372167/149‑1 (MQ=255) aCT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGACGCACCtg < 1:82910/148‑1 (MQ=255) cT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATCGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCtgt < 7:185970/148‑1 (MQ=255) t‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCtgt > 2:12077/1‑147 (MQ=255) c‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTga < 4:327122/147‑1 (MQ=255) c‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTga < 6:27890/147‑1 (MQ=255) c‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACATGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCACACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTgaga > 6:30698/1‑149 (MQ=255) aaCCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGt > 6:307527/1‑116 (MQ=255) ggACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGc < 4:225938/149‑1 (MQ=255) gACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCt > 8:60299/1‑149 (MQ=255) g‑‑‑gACTTCCTGCCGCCGGACCTGTCGGCAGCAGCGGCCTAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTg < 4:348077/149‑1 (MQ=255) gACTTCCTGCCTCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTgg > 2:125794/1‑149 (MQ=255) gACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTgg < 7:309921/149‑1 (MQ=255) gACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTgg < 1:12077/149‑1 (MQ=255) cTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGc > 8:26714/1‑148 (MQ=255) tgcTGCCGCCAGGTCCGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGa > 8:176360/3‑148 (MQ=255) tCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGa > 6:348093/1‑148 (MQ=255) cTGCCGCCGGACCTGGTGGCAGCAGCGGCCAAGAACTTCGAGCGCAGTCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGATAg < 4:224306/149‑1 (MQ=255) tGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGATAgg > 7:185332/1‑149 (MQ=255) gccgGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGATAGGCCtt > 5:101267/1‑149 (MQ=255) ccgGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGATAGGCCTTc < 4:187172/149‑1 (MQ=255) cgGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGATAGGCCTTCa < 8:113357/149‑1 (MQ=255) gACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGATAGGCCTTCaa > 6:26475/1‑148 (MQ=255) aCCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGATAGGCCTTCAata < 8:117945/149‑1 (MQ=255) aCCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGATAGGCCTTCAata < 5:365833/149‑1 (MQ=255) aCCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGATAGGCCTTCAata > 6:123846/1‑149 (MQ=255) | GCGACTACAACAATAGCCGTTACGACTACATTCTCGACAACCTGAGCCTGAAGCAGGCAGCCGGCACCCTGAGCCCGCAAGACCTGCAGGACCTGAAGCGCTACCTGAAACCTGACT‑AC‑AACCCGGACAAG‑‑‑GACTTCCTGCCGCCGGACCTGGCGGCAGCAGCGGCCAAGAACTTCGAGCGCAGGCCTTGAGATAGGGGCTGGACTCTTCGCGGGCTTGCCCGCTCCCACACGGTGCCAGGCCTGAAGGCATGATGCACCTGTGAGAGCTGGCTTGCTGGCGATAGGCCTTCAATA > NC_002947/5597743‑5598038 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |