| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,633,948 | T→G | 6.5% | F1160V (TTC→GTC) | putA → | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,633,948 | 0 | T | G | 6.5% | 240.1 / 7.0 | 77 | F1160V (TTC→GTC) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (37/35); new base G (3/2); total (40/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01 | |||||||||||
CGACGCCATTGGCCGCCACTTCCAGCAGCAGGACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTGGCGCAGTTCGCCGCGGTACTGGC > NC_002947/5633800‑5634096 | cGACGCCATTGGCCGCCACTTCCAGCAGCAGGACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGt < 5:281139/149‑1 (MQ=255) gACGCCATTGGCCGCCACTTCCAGCAGCAGGACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGtt > 7:183828/1‑149 (MQ=255) gACGCCATTGGCCGCCACTTCCAGCAGCAGGACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGtt > 2:296780/1‑149 (MQ=255) aCGCCATTGGCCGCCACTTCCAGCAGCAGGACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTc > 6:205436/1‑149 (MQ=255) ttGGCCGCCACTTCCAGCAGCAGGACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑gccagc < 6:33035/149‑1 (MQ=255) ttGGCCGCCACTTCCAGCAGCAGGACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑gccagc < 8:344015/149‑1 (MQ=255) ccgccACTTCCAGCAGCAGGACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGt > 8:325809/1‑149 (MQ=255) ccgccACTTCCAGCAGCAGGACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGt > 7:135729/1‑149 (MQ=255) cACTTCCCGCCGCAGGACGGCGACGGCACGCCGGACCGCCCCCTGCACGAACAGCTGGTACCGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCCGCCAGTCGCa < 6:126181/149‑1 (MQ=255) cagcagcagGACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCg < 8:63761/148‑1 (MQ=255) gcagGACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATcg > 8:223637/1‑149 (MQ=255) gACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATcgcccg > 6:87551/1‑149 (MQ=255) aCGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑gc < 2:283560/121‑1 (MQ=255) aCGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑gc > 1:283560/1‑121 (MQ=255) aCGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATcgcccgc < 7:223637/149‑1 (MQ=255) cGAAGGCACGCCGGCCCGCACCCGGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGTCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCctgc < 8:240551/149‑1 (MQ=255) cACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAg > 6:358684/1‑149 (MQ=255) aCGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAgg > 3:377795/1‑149 (MQ=255) cGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCgg > 6:334770/1‑149 (MQ=255) aCCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGa < 5:192489/149‑1 (MQ=255) ccTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAgc > 5:310619/1‑149 (MQ=255) ccTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAgc > 3:228101/1‑149 (MQ=255) gCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAgcgc > 8:180220/1‑148 (MQ=255) cACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGGGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCaa > 5:331009/1‑149 (MQ=255) aCGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCAGCCAGGCCCGACCGGCGAGCGCaa > 7:234851/1‑148 (MQ=255) cGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACa < 5:217137/149‑1 (MQ=255) gAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAg > 7:114924/1‑149 (MQ=255) cAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTa < 8:183828/149‑1 (MQ=255) cAGCTGGTAAAGCCGCTGCACCGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTa < 6:310619/149‑1 (MQ=255) tGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTacac > 2:383782/1‑148 (MQ=255) ggTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCa > 6:9878/1‑149 (MQ=255) tAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCAt < 8:135729/148‑1 (MQ=255) aaGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTc < 5:358684/148‑1 (MQ=255) aaGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCAGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTc < 8:234851/148‑1 (MQ=255) gCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCAGc > 3:249146/1‑149 (MQ=255) gCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATcgcccgc > 4:230155/1‑100 (MQ=255) gCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATcgcccgc < 3:230155/100‑1 (MQ=255) cACGGCCTGAAGGCCTGGGCCGAGAACACCCAGCTGGCCGTCCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCATGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGt < 1:325700/147‑1 (MQ=255) cACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGt < 5:87551/147‑1 (MQ=255) aCGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCAGCTGCCAGGCCCGACCGGCGAGCGCACCAGCTACACCATTCTGCCGCGTGAg > 4:114580/1‑149 (MQ=255) cGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAg > 4:42925/1‑148 (MQ=255) ggCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGa > 3:71072/1‑146 (MQ=255) ggCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGa < 4:71072/146‑1 (MQ=255) ccTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGGTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGc < 4:120330/112‑1 (MQ=255) ccTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGGTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGc > 3:120330/1‑112 (MQ=255) tGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGa > 1:196716/1‑142 (MQ=255) tGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGa < 2:196716/142‑1 (MQ=255) aaGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTg < 7:325809/147‑1 (MQ=255) cTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCctg > 7:67296/1‑85 (MQ=255) cTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCctg < 8:67296/85‑1 (MQ=255) cTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGcc > 8:5344/1‑149 (MQ=255) gCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGc > 1:24951/1‑111 (MQ=255) gCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGc < 2:24951/111‑1 (MQ=255) aacaacCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACaa > 5:304679/1‑149 (MQ=255) aacaacCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACaa < 5:205436/149‑1 (MQ=255) acaacCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAAc < 8:114924/149‑1 (MQ=255) acaacCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAAc < 4:377795/149‑1 (MQ=255) aacCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACg > 5:356742/1‑148 (MQ=255) ccAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGaaa < 7:147576/149‑1 (MQ=255) cAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCCTGAGCACGAGCTGTGCCTGGACGACAACGAAAc > 8:71641/1‑149 (MQ=255) aGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAAcc > 1:69145/1‑149 (MQ=255) gCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCg > 1:335210/1‑83 (MQ=255) gCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCg < 2:335210/83‑1 (MQ=255) tggcGAACTGGCTGCACAGCGCGGCCAGGTCGGCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTgg > 6:290351/4‑132 (MQ=37) tggcGAACTGGCTGCACAGCGCGGCCAGGTCGGCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTgg < 5:290351/129‑1 (MQ=37) ggcGAACTGGCTGCACAGCGCGGCCAGGTC‑GGCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACct > 3:380314/3‑149 (MQ=255) gCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGAcc < 1:383782/148‑1 (MQ=255) gCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACct > 2:152586/1‑149 (MQ=255) ccGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACctg < 6:304679/149‑1 (MQ=255) ccTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTgg > 7:204896/1‑149 (MQ=255) ccTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTgg < 6:118865/149‑1 (MQ=255) ccTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTgg < 3:278956/149‑1 (MQ=255) gCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTGTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTGgcgc < 1:296780/148‑1 (MQ=255) gCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTGgcgc < 6:331009/148‑1 (MQ=255) gcTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGAGCTGAGCCTGGCCGACAACGAACCCGACCTGCTGGCGCAGTTcg > 8:241727/1‑149 (MQ=255) gtgCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTGGCGCAGTTcgccg > 3:307081/1‑149 (MQ=255) tgCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTGGCGCAGTTcgccg < 5:334770/148‑1 (MQ=255) cAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTGGCGCAGTTCGCcgcg < 7:5344/148‑1 (MQ=255) cAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTGGCGCAGTTCGCCGCgg > 3:154527/1‑149 (MQ=255) gCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTGGCGCAGTTCGCCGCGGTa > 6:106498/1‑149 (MQ=255) ttC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTGGCGCAGTTCGCCGCGGTACTGGc > 4:277853/1‑149 (MQ=255) ttC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTGGCGCAGTTCGCCGCGGTACTGGc > 7:16341/1‑149 (MQ=255) | CGACGCCATTGGCCGCCACTTCCAGCAGCAGGACGGCGAAGGCACGCCGGACCGCACCCTGCACGAACAGCTGGTAAAGCCGCTGCACGGCCTGAAGGCCTGGGCCGAGAACAACCAGCTGGCCGACCTGGCCGCGCTGTGCAGCCAGTTC‑GCCAGCCAGTCGCAGAGCGGCATCGCCCGCCTGCTGCCAGGCCCGACCGGCGAGCGCAACAGCTACACCATTCTGCCGCGTGAGCACGTGCTGTGCCTGGCCGACAACGAAACCGACCTGCTGGCGCAGTTCGCCGCGGTACTGGC > NC_002947/5633800‑5634096 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |