| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,648,209 | G→C | 7.1% | intergenic (+16/+8) | elaA → / ← PP_4957 | acetyltransferase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,648,209 | 0 | G | C | 7.1% | 212.7 / 4.7 | 68 | intergenic (+16/+8) | elaA/PP_4957 | acetyltransferase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (30/33); new base C (2/3); total (32/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01 | |||||||||||
GGCCGGGGGTGCCGGTTTATCTGTCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTTGCGTGCGCCTTCCTGCTGTTCGAACTCGCAGACGATGTC > NC_002947/5648063‑5648357 | ggCCGGGGGTGCCGGTTTATCTGTCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGc < 2:283950/148‑1 (MQ=255) gCCGGGGGTGCCGGTTTATCTGTCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCg > 2:306109/1‑149 (MQ=255) ccGGGGGTGCCGGTTTATCTGTCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCg > 6:352913/1‑148 (MQ=255) gggTGCCGGTTTATCTGTCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACAt > 3:307567/1‑149 (MQ=255) gTGCCGGTTTAGCTGTCGGCTCCGGCGCATTTCCAGGCGGTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGCCCGcacaggg < 8:269801/149‑4 (MQ=255) gCCGGTTTATCTGTCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAgg > 2:337414/1‑149 (MQ=255) ccGGTTTATCTGTCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAggg < 3:194511/149‑1 (MQ=255) ccGGTTTATCTGTCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAggg < 1:328010/149‑1 (MQ=255) ccGGTTTATCTGTCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAggg < 1:337414/149‑1 (MQ=255) cGGTTTATCTGTCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGCACGGCATCGCGTCCTTTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGCCCGcacagggtggg < 8:152466/149‑8 (MQ=255) tCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGc > 8:267070/1‑147 (MQ=255) tCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGc < 7:267070/147‑1 (MQ=255) ggCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACt < 6:187528/148‑1 (MQ=255) cGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTcgc < 2:58657/147‑1 (MQ=255) cGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTcgc < 2:226040/147‑1 (MQ=255) gcATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAAc < 1:42039/131‑1 (MQ=255) gcATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAAc > 2:42039/1‑131 (MQ=255) gcATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCt > 8:110802/1‑149 (MQ=255) tACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCg < 7:292192/148‑1 (MQ=255) cAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGACGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCaa < 8:187021/149‑1 (MQ=255) tgCGGTTTATTGCCGCCATTGGTTTGCGGTTGTGGGGGTTGTTTTTTTTGTTGCAGGCATCGCCTTCATTTGTATTCGCAATGGTTTTTAGCCCACCCTGTGCGGGCCTCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCaa < 1:110922/148‑1 (MQ=255) ggCGTTTTATGCACGCAAGTGTTTTGCGGTGTTGTGCGAGTAGTTTTAGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGTG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGt < 5:88305/149‑1 (MQ=255) cGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGa < 7:314706/149‑1 (MQ=255) tGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGgatg < 3:301529/148‑1 (MQ=255) gCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGgatgat > 5:301026/1‑149 (MQ=255) ccGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATc > 7:226618/1‑148 (MQ=255) cATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTg > 3:167934/1‑149 (MQ=255) ggTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCtt < 4:307567/148‑1 (MQ=255) cGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATc < 5:221412/149‑1 (MQ=255) cGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATc > 2:324009/1‑149 (MQ=255) gtggtgGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCACACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGc > 7:7477/1‑149 (MQ=255) tggGCGAGGAGTTTTTGGAGGCCGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGGCCTTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGccc < 1:306109/149‑1 (MQ=255) gCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAg > 1:114314/1‑149 (MQ=255) cGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGt > 1:166359/1‑149 (MQ=255) cGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGt > 1:172099/1‑149 (MQ=255) gagTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCAt > 1:141600/1‑148 (MQ=255) tttttGGAGGACGGCATCGCGTCCATTGGAAAGCGCAATGG‑‑ATGACCCCAACCTGTGCGGGCCGCACATCAGCG‑‑GTAACACAGCACTTCGCGGATCTGCCGCAAGTGACCCATGATCCACTGCTAGTCGATCGCACCCCAGTCATGAAt > 5:178492/1‑149 (MQ=255) tttGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATg < 2:166359/148‑1 (MQ=255) tttGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATg < 2:172099/148‑1 (MQ=255) ggaggaCGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGa < 8:226618/148‑1 (MQ=255) ggaCGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAAt > 5:135394/1‑149 (MQ=255) ggaCGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAAt < 2:141600/149‑1 (MQ=255) aCGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGc > 4:133937/1‑149 (MQ=255) ggCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGc > 8:220577/1‑111 (MQ=255) ggCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGc < 7:220577/111‑1 (MQ=255) cATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAAt < 4:2378/135‑1 (MQ=255) cATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGAAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAAt > 3:2378/1‑135 (MQ=255) tCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCg < 1:23476/149‑1 (MQ=255) gcgTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGt < 3:133937/148‑1 (MQ=255) cgTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTgg > 3:96036/1‑149 (MQ=255) gccATTGCAAGGCGCAAGGG‑‑CTGAGCCCACCCGTTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGAGCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGtt < 8:342213/148‑1 (MQ=255) cATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTtgc < 7:110802/149‑1 (MQ=255) aTTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTtgcg > 8:289572/1‑149 (MQ=255) gAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCgg < 2:148126/135‑1 (MQ=255) gAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCgg > 1:148126/1‑135 (MQ=255) aaTGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTTGCGTgcgc > 5:180739/1‑149 (MQ=255) g‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTTGCGTGCGCCTTCCTGCTGt > 1:20607/1‑149 (MQ=255) tGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTTGCGTGCGCCTTCCTGCTGTTc < 6:135394/149‑1 (MQ=255) tGAGCCCACCCTGTGCGGGCCACACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTTGCGTGCGCCTTCCTGCTGTTc < 8:7477/149‑1 (MQ=255) gCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTTGCGTGCGCCTTCCTGCTGTTCGaa > 7:326311/1‑149 (MQ=255) cccACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTTGCGTGCGCCTTCCTGCTGTTCGAAc < 8:326311/149‑1 (MQ=255) cctgatgtgCGGCCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTTGCGTGCGCCTTCCTGCTGTTCGAACTc > 2:103516/6‑149 (MQ=255) ctgatgtgCGGCCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGc < 4:84418/98‑1 (MQ=255) ctgatgtgCGGCCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGc > 3:84418/5‑102 (MQ=255) aCCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTTGCGTGCGCCTTCCTGCTGTTCGAACTCg > 4:373296/1‑149 (MQ=255) ccTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTTGCGTGCGCCTTCCTGCTGTTCGAACTCg > 6:222113/1‑147 (MQ=255) cGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGa > 2:32736/1‑90 (MQ=255) cGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGa < 1:32736/90‑1 (MQ=255) agggCCGCACATCAGTG‑‑GTAACCCAGCACTTCGCGGATGTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCGCAGTGTTGAATGCGATAATGCCCGTCGTGGTTGCGTGCGCCTTCCTTCTGTTCGAACTCGCAGACGAt < 6:178492/148‑1 (MQ=255) gCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTTGCGTGCGCCTTCCTGCTGTTCGAACTCGCAGACGATGTc < 4:167934/149‑1 (MQ=255) gCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGAACGGCGTGGTTGCGTGCGCCTTCCTGCTGTTCGACCTCGCAGACGAAGTc > 8:290541/1‑149 (MQ=255) | GGCCGGGGGTGCCGGTTTATCTGTCGGCTCCGGCGCATTTACAGGCGTTTTATGCCCGCCATGGGTTTGCGGTGGTGGGCGAGGAGTTTTTGGAGGACGGCATCGCGTCCATTGGAATGCGCAAGGG‑‑ATGAGCCCACCCTGTGCGGGCCGCACATCAGGG‑‑GTAACCCAGCACTTCGCGGATCTGCCGCAAGTGACGGATGATCCACTGCTTGTCGATCGCCCCCCAGTCATGAATGCGATAATGCCCGGCGTGGTTGCGTGCGCCTTCCTGCTGTTCGAACTCGCAGACGATGTC > NC_002947/5648063‑5648357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |