| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,684,814 | G→C | 7.8% | A693A (GCC→GCG) | PP_4988 ← | signal transduction histidine kinase CheA/CheY‑like receiver |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,684,814 | 0 | G | C | 7.8% | 195.8 / 7.0 | 64 | A693A (GCC→GCG) | PP_4988 | signal transduction histidine kinase CheA/CheY‑like receiver |
| Reads supporting (aligned to +/- strand): ref base G (24/35); new base C (3/2); total (27/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.44e-01 | |||||||||||
GTTGCTGCCAGCGCGACAACAACGTCTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGTGGCAGTTGATGGCCCT > NC_002947/5684669‑5684962 | gTTGCTGCCAGCGCGACAACAACGTTTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑cc > 2:300825/1‑149 (MQ=255) ctgcCAGCGCGACAACAACGTCTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑gg < 5:157950/148‑1 (MQ=255) ctgcCAGCGCGACAACAACGTCTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑gg < 3:209098/148‑1 (MQ=255) ctgcCAGCGCGACAACAACGTCTCTGCATCGAGCAGGAAGTCAATGGAATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCATGCTGAGGCCGGAATGGTGCG‑GGTCTTCATACAGGCTGGCGAGGCGGCGGTCCACGG‑CCT‑GGc > 8:198338/1‑149 (MQ=255) ccAGCGCGACAACAACGTCTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCCGTGGACCGCCG‑CCT‑GGCCa < 2:305521/148‑1 (MQ=255) cAGCGCGACAACAACGTCTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAAc < 2:256736/149‑1 (MQ=255) cgACAACAACGTCTCTGCATCCAGCAGGATGTCCATCGCATGCGCCAGGAAGCTGCCGACCAACTGCGGATCACGCTTGCTGCGGCCGTCATGGTGCG‑GCTCATCAAGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCt < 8:304925/149‑1 (MQ=255) acaacaACGTCTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTc > 2:117284/1‑148 (MQ=255) caacaaCGTCTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGa > 6:122908/1‑149 (MQ=255) aacaacGTCTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGAt > 2:246214/1‑149 (MQ=255) caacGTCTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCa < 5:122908/149‑1 (MQ=255) aacGTCTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCt > 6:351797/1‑142 (MQ=255) aacGTCTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCt < 5:351797/142‑1 (MQ=255) gAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCgg > 8:59236/1‑149 (MQ=255) gAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCgg < 2:43439/149‑1 (MQ=255) aGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCGCGATCAGTTCCGCGGCACCggg > 8:321319/1‑149 (MQ=255) aGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCACGATCAGTTCCGCGGCACCggg > 4:128559/1‑149 (MQ=255) ggATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATg > 2:36657/1‑149 (MQ=255) gATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATgg < 7:300281/149‑1 (MQ=255) aTGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATggc < 2:111381/149‑1 (MQ=255) tCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATggcggc > 3:57749/1‑149 (MQ=255) tCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATggcgg < 6:377168/148‑1 (MQ=255) gcatggGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAggg < 1:233711/148‑1 (MQ=255) ggCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTg < 6:169479/148‑1 (MQ=255) ggCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTg < 2:133080/148‑1 (MQ=255) gCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGTGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGc > 1:301424/1‑149 (MQ=255) ccAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCTCGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCt < 1:300825/149‑1 (MQ=255) gCTGGCGAACAACTGGGGATCACGCTTGGTGCGGCCGGCATGGTTCG‑GGTCTTCCTGCATGCTGGCCATGCGGGGGTCCACGGTCCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAg < 1:117284/148‑1 (MQ=255) tGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTgc > 2:385584/1‑149 (MQ=255) gCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTgcgc < 7:179972/149‑1 (MQ=255) gCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTgcg < 2:352516/148‑1 (MQ=255) gACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGcc > 6:114157/1‑148 (MQ=255) aCCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCaa < 2:301424/149‑1 (MQ=255) cAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGc < 4:294686/149‑1 (MQ=255) cGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGa < 6:62038/148‑1 (MQ=255) ggATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATg > 6:384890/1‑149 (MQ=255) aCGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGaac < 4:57749/148‑1 (MQ=255) aCGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGaac < 6:191199/148‑1 (MQ=255) ctgcGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTTGCCAGGGGGCGGTCCAGGG‑CCT‑GGCCAACATGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGAcc < 7:198338/148‑1 (MQ=255) cggccggcATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGT‑CCT‑GGCCAACCTGCACGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCgcgc < 3:128559/149‑1 (MQ=255) cggccggcATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGATGCGCCAAGCCCAGATGGAACAACGACcgc < 1:36657/147‑1 (MQ=255) gcATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTc > 6:47549/1‑149 (MQ=255) gcATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTc > 2:37350/1‑149 (MQ=255) aTGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGaacaac < 4:212327/133‑1 (MQ=255) aTGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGaacaac > 3:212327/1‑133 (MQ=255) tGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAg < 5:47549/149‑1 (MQ=255) gTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGcc < 7:59236/149‑1 (MQ=255) cG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGccatt > 4:186806/1‑149 (MQ=255) cATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCAttt < 5:384890/147‑1 (MQ=255) aTGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCg < 1:385584/148‑1 (MQ=255) tGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGc > 6:118621/1‑149 (MQ=255) ggttGGCCAGGCCGTGGACCGCCG‑CCT‑GGCCAGCCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGAc > 1:180068/4‑116 (MQ=37) ggttGGCCAGGCCGTGGACCGCCG‑CCT‑GGCCAGCCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGAc < 2:180068/113‑1 (MQ=37) ggttGGCCAGGCCGTGGACCGCCG‑CCT‑GGCCAGCCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCAtt > 7:164536/4‑149 (MQ=38) gttGGCCAGGCCGTGGACCGCCG‑CCT‑GGCCAGCCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCAttt > 6:265992/3‑149 (MQ=39) gCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCAttt < 3:186806/149‑1 (MQ=255) gCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAg < 5:114157/149‑1 (MQ=255) ccAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGt > 2:38399/1‑149 (MQ=255) gTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGTGGCAGTTGAt > 2:385489/1‑149 (MQ=255) tCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGTGGCAGTTGATg < 1:37350/149‑1 (MQ=255) cACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGcca > 7:198024/1‑114 (MQ=255) cACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGcca < 8:198024/114‑1 (MQ=255) cACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGTGGCAGTTGATGGc > 6:251307/1‑149 (MQ=255) aCGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGTGGCAGTTGATGGcc < 1:246214/149‑1 (MQ=255) gg‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGTGGCAGTTGATGGCCCt > 6:264697/1‑149 (MQ=255) | GTTGCTGCCAGCGCGACAACAACGTCTCTGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCG‑GGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGG‑CCT‑GGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGTGGCAGTTGATGGCCCT > NC_002947/5684669‑5684962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |