| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,753,485 | T→G | 5.5% | intergenic (+46/‑320) | glnA → / → glnL | glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,753,485 | 0 | T | G | 5.5% | 230.3 / 4.4 | 73 | intergenic (+46/‑320) | glnA/glnL | glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG |
| Reads supporting (aligned to +/- strand): ref base T (36/32); new base G (2/2); total (39/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.21e-01 | |||||||||||
CGACGACTTCATCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGTTCAGGTTAAACGTTTCACCAAGACTTTC > NC_002947/5753337‑5753631 | cgacgaCTTCATCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGcctccct > 2:383868/1‑149 (MQ=255) gacgacTTCATCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGcctccctc < 6:138043/149‑1 (MQ=255) cgacTTCATCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCgg < 1:196353/149‑1 (MQ=255) gacTTCATCGATGCCTTCATCTAGCTGAAGAGCGAAGAAGAAATCAAGGTCAGTACCTTCGTTCACCGGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATTATCAAAACGGCCTCCCTCgg < 8:133206/148‑1 (MQ=255) gacTTCATCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCggg < 1:14038/149‑1 (MQ=255) acTTCATCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑a < 2:106093/149‑1 (MQ=255) cTTCATCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑Ag < 4:358706/149‑1 (MQ=255) cTTCATCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑Ag < 2:375518/149‑1 (MQ=255) cTTCATCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑Ag > 2:283915/1‑149 (MQ=255) aTCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGcc < 2:217577/148‑1 (MQ=255) aTCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCg > 5:244932/1‑149 (MQ=255) aTCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCg > 7:291436/1‑149 (MQ=255) tCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCGAGGG‑AGGCCGt < 3:336725/149‑1 (MQ=255) gATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑a < 4:299632/141‑1 (MQ=255) gATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑a > 3:299632/1‑141 (MQ=255) gATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGttt < 5:74595/149‑1 (MQ=255) tGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTTGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGtttt‑t < 8:291436/149‑1 (MQ=255) tGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGtttt‑t < 6:244932/149‑1 (MQ=255) ccTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGt < 1:94222/149‑1 (MQ=255) ccTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCGAGGG‑AGGCCGttttga < 1:357965/148‑3 (MQ=255) cTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATATGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGtt > 3:54353/1‑149 (MQ=255) tCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTgc > 3:61618/1‑149 (MQ=255) cGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTgcg > 6:227478/1‑149 (MQ=255) aaGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTg > 8:13240/1‑149 (MQ=255) aaGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTg > 5:336238/1‑149 (MQ=255) gagCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTGTT‑TGATTCTGCGCACCTTTCa > 7:283941/1‑149 (MQ=255) aagaagaaATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCgg < 5:21743/114‑1 (MQ=255) aagaagaaATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCgg > 6:21743/1‑114 (MQ=255) agaagaaATCAAGGTCCGTACCTTCGTACACCCGCTGGAATATGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAgc < 4:54353/148‑1 (MQ=255) agaagaaATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAgcg > 3:263658/1‑149 (MQ=255) gaaATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGcgccgc < 1:11364/149‑1 (MQ=255) aaGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTTGTGTTTCTGCGCACCTTGCAGAAGCGCCGCTGAtt < 1:248908/149‑1 (MQ=255) aaGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTc < 5:227478/149‑1 (MQ=255) aGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCg > 1:302948/1‑149 (MQ=255) cTTCGTACACCCGCTGGAATACGAGCTGTTCTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGc > 4:214011/1‑149 (MQ=255) cGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCt < 4:219574/147‑1 (MQ=255) gTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATg > 6:327620/1‑149 (MQ=255) cacCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGctc < 2:302948/149‑1 (MQ=255) ccGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTAt > 2:386685/1‑149 (MQ=255) gCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGct > 6:80824/1‑143 (MQ=255) gCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGct < 5:80824/143‑1 (MQ=255) gCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCt > 8:8110/1‑149 (MQ=255) gCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCt < 1:383868/149‑1 (MQ=255) tGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTg > 3:135336/1‑149 (MQ=255) gatcagcaGCTGTAGTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGt > 3:363638/8‑149 (MQ=255) gAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGt > 7:258881/1‑149 (MQ=255) gAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGt < 1:283915/149‑1 (MQ=255) tACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCa > 5:114289/1‑149 (MQ=255) cGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAAGGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCAt < 7:13240/148‑1 (MQ=255) gAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCAtt > 4:62458/1‑148 (MQ=255) gCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAAt > 7:84584/1‑149 (MQ=255) ctacAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCacac < 4:263658/149‑1 (MQ=255) cAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCAt > 3:126483/1‑149 (MQ=255) tgctgATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGGAAGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGcc > 1:300374/1‑149 (MQ=255) tgtcatTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAAtt > 3:248734/5‑149 (MQ=255) atTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCACACGGG‑AGGGCGTTTT‑AGTTTCTGCGCACCATGCAGAAGCGCCGCTGCTTCGCCTGACACGCTATGCTCTATCTTGGTGCATAAATTCACACCATGCCCTCAATTGCTc > 5:219875/1‑149 (MQ=255) gcgcCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTcccc > 6:135923/1‑148 (MQ=255) gcgcCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTcccc > 4:63335/1‑148 (MQ=255) gcCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCaa > 2:378955/1‑148 (MQ=255) ccTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCAt > 4:138061/1‑115 (MQ=255) ccTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCAt < 3:138061/115‑1 (MQ=255) ccTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATc < 2:300374/149‑1 (MQ=255) gcgcCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTgtt > 5:104442/1‑147 (MQ=255) cgcCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGtt < 4:135336/149‑1 (MQ=255) gcCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGTTc < 8:258881/149‑1 (MQ=255) ccGATGACATGAGCAACACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGTTCa < 8:283941/149‑1 (MQ=255) gATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGTTCAgg < 4:248734/149‑1 (MQ=255) cATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGTTCAGGTTaaa > 1:366571/1‑149 (MQ=255) cATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGTTCAGGTTaaa < 4:61618/149‑1 (MQ=255) gaaacaaaaaCGGCCTCCCGAGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGTTCAGGTTAAAc > 4:308206/7‑149 (MQ=255) aTGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGt > 3:224195/1‑96 (MQ=255) aTGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGt < 4:224195/96‑1 (MQ=255) aTCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGTTCAGGTTAAACGtt > 3:41931/1‑149 (MQ=255) aaaCGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACCCCATGCCCTCAATTGCTCCCCAATCTGGTTCAGGTTAAACGTTTCAc > 5:250859/1‑149 (MQ=255) aaCGGCCTCCCGAGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGACGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGTTCAGGTTAAACGTTTCAc > 3:346347/1‑148 (MQ=255) cctcGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGTTCAGGTTAAACGTTTCACCAAGACTTTc < 4:126483/149‑1 (MQ=255) cctcGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCCCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGTTCAGGTTAAACGTTTCACCAAGACTTTc < 5:327620/149‑1 (MQ=255) tcGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTcc > 3:310494/1‑109 (MQ=255) tcGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTcc < 4:310494/109‑1 (MQ=255) | CGACGACTTCATCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCCGTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGATCTGATTGGCGCCTCGCGCCGATGACATGATCAAAACGGCCTCCCTCGGG‑AGGCCGTTTT‑TGTTTCTGCGCACCTTGCAGAAGCGCCGCTGATTCGCCTGTCACGCTATGCTCTATCTTGGTGCATTAATTCACACCATGCCCTCAATTGCTCCCCAATCTGGTTCAGGTTAAACGTTTCACCAAGACTTTC > NC_002947/5753337‑5753631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |