| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,906,643 | A→T | 5.9% | L53Q (CTG→CAG) | spuF ← | spermidine/putrescine ABC transporter ATP binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,906,643 | 0 | A | T | 5.9% | 254.7 / 2.9 | 84 | L53Q (CTG→CAG) | spuF | spermidine/putrescine ABC transporter ATP binding protein |
| Reads supporting (aligned to +/- strand): ref base A (40/39); new base T (3/2); total (43/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
CTGGAACATCATGTTGATTGGCCGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAGGGCTTTTTTATAGGCACCGGAGGC > NC_002947/5906498‑5906791 | cTGGAACATCATGTTGATTGGCCGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAggg < 2:310002/149‑1 (MQ=255) gAACATCATGTTGATTGGCCGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCg > 2:144990/1‑148 (MQ=255) aaCATCATGTTGATTGGCCGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGaa < 8:48993/149‑1 (MQ=255) atcatGTTGATTGGCCGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCTGCTGGGCggctcc < 2:336115/149‑6 (MQ=255) tGTTGATTGGCCGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCa < 7:304622/149‑1 (MQ=255) gTTGATTGGCCGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑c > 6:232250/1‑149 (MQ=255) aTTGGCCGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCtt > 5:334423/1‑149 (MQ=255) ttGGCCGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTg > 3:14692/1‑149 (MQ=255) gCCGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCg > 5:292973/1‑148 (MQ=255) gCCGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCg < 1:144990/148‑1 (MQ=255) cGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGAt < 4:243127/149‑1 (MQ=255) cGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGAt < 8:323003/149‑1 (MQ=255) gTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGCTTGGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGATGATGTCA‑CCCTTGCGGATTTcc > 1:116470/1‑149 (MQ=255) gTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCa < 5:229350/133‑1 (MQ=255) gTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCa > 6:229350/1‑133 (MQ=255) gggCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAgg < 1:146575/148‑1 (MQ=255) gcggcATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGac < 4:265855/149‑1 (MQ=255) tCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTc > 4:272431/1‑149 (MQ=255) tCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTc > 1:362958/1‑149 (MQ=255) ggTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCa > 5:288791/1‑149 (MQ=255) gACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCg > 8:47428/1‑149 (MQ=255) gACGCCATCGAGGAAGATCCGCCCTTCGGACGAGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCg > 1:237966/1‑149 (MQ=255) cGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGtt < 6:292973/149‑1 (MQ=255) cGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTCGA‑CTAGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGCGACACATCGTCCACGGCTACCGtt < 2:116470/149‑1 (MQ=255) ccATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTtc < 6:124273/149‑1 (MQ=255) cATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTtcg > 1:375640/1‑149 (MQ=255) aTCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTtcgt > 8:145531/1‑149 (MQ=255) tCGAGGAAGATCCGCCCTTCGGATGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTtcgtc < 6:111287/149‑1 (MQ=255) gAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTtcgtcg < 4:26102/148‑1 (MQ=255) aGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGaa > 8:70431/1‑149 (MQ=255) aGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGaa > 4:177007/1‑149 (MQ=255) gAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑t < 7:70431/149‑1 (MQ=255) gAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑t > 7:263745/1‑149 (MQ=255) gAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑t > 3:37164/1‑149 (MQ=255) aGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑ttt > 6:42236/1‑149 (MQ=255) aGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑ttt < 1:385625/149‑1 (MQ=255) ccTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGAc < 6:288791/149‑1 (MQ=255) ttCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGAccc > 3:264493/1‑149 (MQ=255) ggACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGt > 3:223769/1‑149 (MQ=255) gACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTc > 5:88003/1‑149 (MQ=255) cGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTTGA‑CTTGCCGGAACCTGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGa < 3:269188/149‑1 (MQ=255) gggCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGAt < 5:42236/149‑1 (MQ=255) ggCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATc < 7:320423/149‑1 (MQ=255) gcgc‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGAGCTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCAc > 1:63434/1‑109 (MQ=255) gcgc‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCAc < 2:63434/108‑1 (MQ=255) gcgc‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTtcgt < 8:224049/122‑1 (MQ=255) gcgc‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTtcgt > 7:224049/1‑122 (MQ=255) gcgc‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCt > 4:365871/1‑149 (MQ=255) gc‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGt > 2:386506/1‑141 (MQ=255) gc‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGt < 1:386506/141‑1 (MQ=255) gAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGAcc < 3:365871/148‑1 (MQ=255) gAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGAc > 1:307904/1‑147 (MQ=255) gAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGAc > 6:294491/1‑147 (MQ=255) gCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCa < 6:277882/149‑1 (MQ=255) ccGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCAc > 3:173128/1‑149 (MQ=255) ggCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCt > 6:62988/1‑149 (MQ=255) cAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGAcc < 6:228195/124‑1 (MQ=255) cAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGAcc > 5:228195/1‑124 (MQ=255) cATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTgg > 1:311923/1‑149 (MQ=255) agcaAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTg < 5:232250/149‑1 (MQ=255) agcaAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTg < 2:362958/149‑1 (MQ=255) gcaAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTgg > 2:185726/1‑149 (MQ=255) caAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGc < 2:307904/149‑1 (MQ=255) gTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCAcc > 7:316361/1‑149 (MQ=255) gA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCt < 3:272431/148‑1 (MQ=255) ttGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGACC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCAACTGCTTGGGTTGCTGGCCACCCTCGAg > 3:81989/1‑149 (MQ=255) ttGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAg > 7:353776/1‑149 (MQ=255) gCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAg < 5:378715/147‑1 (MQ=255) gCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTACTGGCCACCCTCGAgg < 7:47428/148‑1 (MQ=255) cGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGc < 7:32522/131‑1 (MQ=255) cGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGc > 8:32522/1‑131 (MQ=255) ggAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGGTTGGGTTGCTGGCCACCCTCGAGGGCtt > 2:259549/1‑149 (MQ=255) ggAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAGGGCtt > 8:28520/1‑149 (MQ=255) gAACCGGAGCCGCACAGCAGGGCGAATATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCACCGGCTACCGTTTCGTCGACA‑TTTTTCGTGAACCGGTCGATATTCACCAGCACCTGATTGGGATGATGGCCACCCGCGAGGGCttt > 3:14973/1‑149 (MQ=255) gatcttcgccCTGCTGGGCGAAGATCTCAGCCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAGGGCttttt > 1:29109/7‑148 (MQ=255) cGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAGGGCTTTTTta < 2:237966/149‑1 (MQ=255) ggAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAGGGCTTTTTtat < 4:173128/149‑1 (MQ=255) ggAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAGGGCTTTTTtat < 1:185726/149‑1 (MQ=255) tcttcgccCTGCTGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGcc < 6:159143/124‑1 (MQ=255) tcttcgccCTGCTGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGcc > 5:159143/5‑128 (MQ=255) gAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAGGGCTTTTTtata < 3:177007/149‑1 (MQ=255) gAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAGGGCTTTTTtata < 6:88003/149‑1 (MQ=255) aGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAACTTTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAGGGCTTTTTtata < 2:111298/149‑1 (MQ=255) ttcgccCTGCTGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAGGGCTTTTTTATAgg > 6:56189/3‑149 (MQ=255) agcagGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGATGGCTTTTTTATAGGCACCGGa < 1:211349/149‑1 (MQ=255) agGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACTCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAGGGCTTTTTTATAGGCACCGGAGGc < 2:375640/149‑1 (MQ=255) | CTGGAACATCATGTTGATTGGCCGCTCGTAGGGCGGCATGTCGGTGATGTCGACGCCATCGAGGAAGATCCGCCCTTCGGACGGGCGC‑TCGAAGCCGGCCAGCATGCGCAGCAAGGTGGA‑CTTGCCGGAACCGGAGCCGCCCAGCAGGGCGAAGATCTCA‑CCCTTGCGGATTTCCAGGGACACATCGTCCACGGCTACCGTTTCGTCGAAC‑TTTTTCGTGACCCGGTCGATCTTGACCAGCACCTGCTTGGGTTGCTGGCCACCCTCGAGGGCTTTTTTATAGGCACCGGAGGC > NC_002947/5906498‑5906791 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |