Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,948,434 G→A 100% L14F (CTT→TTT)  rho ← transcription termination factor Rho

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,948,4340GA100.0% 237.7 / NA 70L14F (CTT→TTT) rhotranscription termination factor Rho
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (34/36);  total (34/36)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.
Rejected as polymorphism: Polymorphic base substitution creates a homopolymer stretch.

AACCATCCTGGAGAATCTCCAGCACGCCGTCACCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAGATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGAT  >  NC_002947/5948290‑5948578
                                                                                                                                                |                                                                                                                                                 
aaccATCCTGGAGAATCTCCAGCACGCCGTCACCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCg                                                                                                                                               <  3:105855/149‑1 (MQ=255)
   cATCCTGGAGAATCTCCAGCACGCCGGCACCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGt                                                                                                                                             >  1:5154/1‑148 (MQ=255)
     tacTGGAGAATCTCCAGCACGCCGTCACCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAAt                                                                                                                                          <  7:23674/147‑1 (MQ=255)
     tCCTGGAGAATCTCCAGCACGCCGTCACCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAAt                                                                                                                                          >  7:334915/1‑149 (MQ=255)
       cTGGAGAATCTCCAGCACGCCGTCACCCGTGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCg                                                                                                                                        <  3:62133/149‑1 (MQ=255)
         ggAGAATCTCCAGCACGCCGTCACCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGCGCGAAAATCACGACCTGTTTGCGCGAACGGGCCATGATTTCGATCCCCATCTCTTCGGCCATTTCAAAAAAATCGGTAATCGGc                                                                                                                                      >  5:245401/1‑149 (MQ=255)
                 tcCAGCACGCCGTCACCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCtt                                                                                                                              >  8:111601/1‑149 (MQ=255)
                 tcCAGCACGCCGTCACCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCtt                                                                                                                              >  2:212542/1‑149 (MQ=255)
                   cAGCACGCCGTCACCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCtt                                                                                                                              <  3:61162/147‑1 (MQ=255)
                    aGCACGCCGTCACCAGAGATCTCTTCGCCTCTTTTCGCATTCTTCTTCAGCAGTGCGAAAATCAAGTCCTGTTTGCGCGTACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGa                                                                                                                            <  3:244020/148‑1 (MQ=255)
                      cACGCCGTCACCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGtt                                                                                                                         >  7:74897/1‑149 (MQ=255)
                         gCCGTCACCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTtcag                                                                                                                      <  7:111601/149‑1 (MQ=255)
                          ccGTCACCAGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTGAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTtcagt                                                                                                                     <  6:245401/149‑1 (MQ=255)
                               aCCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAgg                                                                                                                 <  8:123195/148‑1 (MQ=255)
                                         tctTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAggg                                                                                                       >  2:101669/1‑148 (MQ=255)
                                           ttCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAggg                                                                                                       <  6:257723/146‑1 (MQ=255)
                                           ttCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAggg                                                                                                       <  2:5154/146‑1 (MQ=255)
                                              gccgcTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGa                                                                                                 >  8:92976/1‑149 (MQ=255)
                                               ccgcTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGc                                                                                                                                      <  2:74998/111‑1 (MQ=255)
                                               ccgcTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGc                                                                                                                                      >  1:74998/1‑111 (MQ=255)
                                                 gcTTTTCGCATGCTGCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCAGGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCGTGTGCTTGAGTTCAGTCAGGTTCATAAGTGGAATGACGt                                                                                              >  4:239723/1‑149 (MQ=255)
                                                   ttttCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTaa                                                                                            <  8:74897/149‑1 (MQ=255)
                                                    tttCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTaa                                                                                            >  5:245792/1‑148 (MQ=255)
                                                      tCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATc                                                                                          <  1:212542/148‑1 (MQ=255)
                                                      tCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATc                                                                                          <  8:133015/148‑1 (MQ=255)
                                                      tCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCa                                                                                         >  3:306784/1‑149 (MQ=255)
                                                       cGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCa                                                                                         <  7:296914/148‑1 (MQ=255)
                                                         cATGCTTCTTCAGCAGGGCGAAAATGACGTCCTTTTTGCGCGAACGGGCAATGTTTTCGATGCTCATCTGTTCGGCCATTTCCAAATAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCATGTTCATAAGGGGAATGACGTAATCATGt                                                                                      <  1:24999/149‑1 (MQ=255)
                                                          aTGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGTGGAATGACGTAATCATGt                                                                                      >  6:25036/1‑148 (MQ=255)
                                                              ttcttcAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTaag                                                                                   >  3:264954/1‑147 (MQ=255)
                                                              ttcttcAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTaag                                                                                   >  2:321709/1‑147 (MQ=255)
                                                                cttcAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTACAAAAAATCGGCAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAgg                                                                               >  3:274993/1‑149 (MQ=255)
                                                                   cagcagGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAgg                                                                               <  8:334915/146‑1 (MQ=255)
                                                                   cagcagGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGga                                                                             <  7:92976/148‑1 (MQ=255)
                                                                           cGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGc                                                                    >  5:216941/1‑149 (MQ=255)
                                                                            gAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCt                                                                   >  1:339203/1‑149 (MQ=255)
                                                                            gAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCt                                                                   <  5:61001/149‑1 (MQ=255)
                                                                                aTCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTg                                                               <  6:216941/149‑1 (MQ=255)
                                                                                 tCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTgg                                                              >  7:229480/1‑149 (MQ=255)
                                                                                      tCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTaa                                                         >  3:169465/1‑149 (MQ=255)
                                                                                      tCCTGTTTGCGAGAACGGGCCATGTTTTCGATGCCCATCTGTTCTGCCATTTCCAAAAAATCGGTAATCCGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGCAATTACGTAATCATGTAACAAGTGAGAAATAACCTACTGGCTTa                                                          >  8:251832/1‑148 (MQ=255)
                                                                                           tttGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTa                                                                                             >  3:255322/1‑108 (MQ=255)
                                                                                           tttGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTa                                                                                             <  4:255322/108‑1 (MQ=255)
                                                                                                gcgAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAgg                                                                               <  5:270437/117‑1 (MQ=255)
                                                                                                gcgAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAgg                                                                               >  6:270437/1‑117 (MQ=255)
                                                                                                gcgAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGgccgcg                                              >  7:107018/1‑149 (MQ=255)
                                                                                                         ccATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGAt                                     <  6:245792/149‑1 (MQ=255)
                                                                                                          cATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAggg                                                                                                       >  6:124123/1‑83 (MQ=255)
                                                                                                          cATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAggg                                                                                                       <  5:124123/83‑1 (MQ=255)
                                                                                                          cATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATg                                    >  8:15578/1‑149 (MQ=255)
                                                                                                          cATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATg                                    <  7:15578/149‑1 (MQ=255)
                                                                                                            tGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGc                                  >  7:104525/1‑149 (MQ=255)
                                                                                                                 tCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACa                              <  4:264954/148‑1 (MQ=255)
                                                                                                                 tCGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACa                              <  5:25036/148‑1 (MQ=255)
                                                                                                                  cGATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAg                             >  2:19331/1‑148 (MQ=255)
                                                                                                                   gATGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGa                           >  8:344712/1‑149 (MQ=255)
                                                                                                                    attcccATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGTGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGAt                          <  2:57072/146‑1 (MQ=255)
                                                                                                                     tGCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATc                         <  8:104525/149‑1 (MQ=255)
                                                                                                                      gCCCATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATcg                        >  8:64210/1‑149 (MQ=255)
                                                                                                                       cccATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATcgc                       <  8:107018/149‑1 (MQ=255)
                                                                                                                       cccATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATcgc                       <  4:306784/149‑1 (MQ=255)
                                                                                                                        ccATCTGTTCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATcgcg                      >  5:191436/1‑149 (MQ=255)
                                                                                                                               ttCGGCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATCGCGTACTGAt               <  8:229480/149‑1 (MQ=255)
                                                                                                                               ttCGGCCATTTCAATAAAATCGGGAATCTGCTTTTGGTTGAGTTCAGTCATGTTCATAAGGGGAATGTCGTAATCATGTAAGAAGGGAGAATTAATCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGTATCGCGTACTg                 <  4:274993/147‑1 (MQ=255)
                                                                                                                                  ggCCATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATCGCGTACTGATTc             >  3:331854/1‑148 (MQ=255)
                                                                                                                                     cATTTCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATCGCGTACTGATTCGAAt         <  4:331854/149‑1 (MQ=255)
                                                                                                                                         tCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATCGCGTACTGATTCGAATTAg      <  1:321709/148‑1 (MQ=255)
                                                                                                                                         tCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATCGCGTACTGATTCGAATTAg      <  7:251832/148‑1 (MQ=255)
                                                                                                                                         tCCAAAAAATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGATTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATCGCGTACTGATTCGAATTAgg     >  5:82353/1‑149 (MQ=255)
                                                                                                                                           cAAAAAATCGGTAATCGGCTTTTGCTTGAGATCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGa   >  1:233295/1‑149 (MQ=255)
                                                                                                                                             aaaaATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAATCAAGGCCGCGCCGCTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGAt  <  1:101669/149‑1 (MQ=255)
                                                                                                                                             aaaaATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATcgc                       <  5:297646/127‑1 (MQ=255)
                                                                                                                                             aaaaATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATcgc                       >  6:297646/1‑127 (MQ=255)
                                                                                                                                                |                                                                                                                                                 
AACCATCCTGGAGAATCTCCAGCACGCCGTCACCCGAGATCTCTTCGCCGCTTTTCGCATGCTTCTTCAGCAGGGCGAAAATCACGTCCTGTTTGCGCGAACGGGCCATGTTTTCGATGCCCATCTGTTCGGCCATTTCCAAAAGATCGGTAATCGGCTTTTGCTTGAGTTCAGTCAGGTTCATAAGGGGAATGACGTAATCATGTAAGAAGGGAGAATTAAGCTTCTGGCTTAAT‑GAGGCCGCGCCGCTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGAT  >  NC_002947/5948290‑5948578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑