| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,955,821 | A→C | 7.0% | intergenic (+47/+157) | elbB → / ← PP_5221 | putative hydrolase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,955,821 | 0 | A | C | 7.0% | 234.2 / 5.3 | 77 | intergenic (+47/+157) | elbB/PP_5221 | putative hydrolase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (38/33); new base C (4/2); total (42/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTGACTACCCCGGCGTACATGGAGGCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTACA > NC_002947/5955676‑5955969 | gTGACTACCCCGGCGTACATGGAGGCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAgcg > 7:344504/1‑149 (MQ=255) aCTACCCCGGCGTACATGGAGGCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAg < 5:147403/149‑1 (MQ=255) aCTACCCCGGCGTACATGGAGGCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTACcgcgtgg > 1:342147/1‑146 (MQ=255) cccGGCGTACATGGAGGCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCa < 1:379953/143‑1 (MQ=255) cccGGCGTACATGGAGGCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCa > 2:379953/1‑143 (MQ=255) ggCGTACATGGAGGCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAg > 2:228832/1‑149 (MQ=255) aCATGGAGGCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCAc > 7:32906/1‑149 (MQ=255) aTGGAGGCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCAcgc > 1:386096/1‑149 (MQ=255) ggAGGCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCgg > 4:78431/1‑149 (MQ=255) gAGGCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCgg > 8:83642/1‑148 (MQ=255) ggCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTAc > 5:131728/1‑149 (MQ=255) ggCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTAc < 3:353949/149‑1 (MQ=255) cAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCtg > 1:50524/1‑149 (MQ=255) gTCGATCAGCGAGGCGGCGGGCGGTATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTgg < 5:234300/149‑1 (MQ=255) gTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTgg < 3:95600/149‑1 (MQ=37) cGAGCAGCGAGGCGGCGGGCGGGATCTACAAGCGGGGGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTggga < 2:342147/149‑2 (MQ=25) gATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTgggg < 7:251419/148‑1 (MQ=255) gatgcggcgGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTAACTGTGGGGCAACTgcg > 5:363666/4‑149 (MQ=255) ggcgggcgGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATa < 5:7144/149‑1 (MQ=255) gcgggcggGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAg > 6:345927/1‑149 (MQ=255) gggATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCtgtg > 7:240962/1‑149 (MQ=255) gATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAATGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTggg > 2:353688/1‑149 (MQ=255) aTCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGGGGGGCAACTGAGCGATAGCCGGTgggg > 2:87394/1‑149 (MQ=255) tACAAGCTGGTGGACCGAGTGCTGGAGCAGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCACGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCaa > 8:130239/1‑149 (MQ=255) aCAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAAc > 6:221640/1‑149 (MQ=255) aCAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAAc > 8:296972/1‑149 (MQ=255) cAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACt > 8:172153/1‑149 (MQ=255) cAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACt < 3:78431/149‑1 (MQ=255) tggtggACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGcgcg < 2:386096/149‑1 (MQ=255) gtggACGGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCGTGAAGGGCCCGCGGTGCCGGTGGGGCCACTGCGCGATCGCCTGTGGGGCAACGGCGCGAt > 4:101854/1‑149 (MQ=37) tggACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATc < 8:222365/149‑1 (MQ=255) tggACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATc < 5:278106/149‑1 (MQ=255) tggACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATc < 7:111758/149‑1 (MQ=255) gAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTg > 5:88879/1‑148 (MQ=255) gAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGt < 1:154599/149‑1 (MQ=255) aGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTg > 7:71861/1‑147 (MQ=255) gTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAg < 6:131728/149‑1 (MQ=255) tGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAg > 3:148154/1‑148 (MQ=255) ggAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCg > 2:120287/1‑149 (MQ=255) gAGCTGACGCACGAGTAACTTACTGCGTTTGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCg < 8:344504/148‑1 (MQ=255) gAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCgg < 7:172153/149‑1 (MQ=255) gAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCgg < 4:148154/149‑1 (MQ=255) gAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCgg < 2:50524/149‑1 (MQ=255) gAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTCGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCgg > 1:319125/1‑149 (MQ=255) gCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCGGGGGGGCAACTGCGCGATCGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTAccc > 7:207707/1‑149 (MQ=255) aCGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCCGCGCAGGCTTCAAGGCCACGCGGTAGCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTGTACCcgc > 6:313196/1‑149 (MQ=255) aCGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAAATGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCcgc > 4:365299/1‑149 (MQ=255) gAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCcgcg > 4:352309/1‑148 (MQ=255) acttacttCGTTGGCTTCTTCGCGGGGATGCCCGGTCCCACAGGTCCAGCGCATGCTTCAAGGGCACGCGGTACCTTTGGGGCAACTGCGCGATATCCTTTGGGGCAACTGCGCGATCGCTTGTAGGAg < 6:308343/129‑1 (MQ=255) aCTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAg > 5:308343/1‑129 (MQ=255) aCTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAacac < 8:32906/148‑1 (MQ=255) ttACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCgg > 5:363460/1‑149 (MQ=255) gTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGcc < 5:345927/149‑1 (MQ=255) gCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCt < 7:70060/86‑1 (MQ=255) gCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCt > 8:70060/1‑86 (MQ=255) cttcttCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGc < 4:141314/149‑1 (MQ=255) tcttcGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCTCTGCCGGTgtt < 8:240962/148‑3 (MQ=255) tcttcGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCa > 2:40918/1‑149 (MQ=255) ttcGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATc > 1:15774/1‑149 (MQ=255) cgcgGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTTTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATc < 6:363666/147‑1 (MQ=255) cgcgGGCATGCCCGCGCCCACAGGTCCAGCGCAGGCGTCAAGGCCACGCGGTACCTGGGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGAGCGCTTGTAGGCGCGGGTTTACCCGCGAACACCGGCTCTGCCGGTgttcgc < 3:304038/147‑6 (MQ=255) gcgGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCAc > 3:192542/1‑149 (MQ=255) ggCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACcgc < 1:228832/149‑1 (MQ=255) gCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACcgcg > 1:149481/1‑149 (MQ=255) cccGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGc < 1:120287/149‑1 (MQ=255) gCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTg > 7:239483/1‑149 (MQ=255) ccACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTggg < 2:319125/147‑1 (MQ=255) ccACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCt > 2:237820/1‑149 (MQ=255) ccACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCt > 2:232357/1‑149 (MQ=255) ccACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCt > 8:105764/1‑149 (MQ=255) ccACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCt > 7:317953/1‑149 (MQ=25) cacaGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTg > 3:99771/1‑149 (MQ=25) acaGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGt > 4:174601/1‑149 (MQ=255) caGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTc < 2:15774/149‑1 (MQ=255) aGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCg < 7:83642/149‑1 (MQ=255) gggccAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGc < 5:221640/146‑1 (MQ=255) gTCCAGCGCAGGCTTCAATGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGACAGCCCAGGCTGgcgcg < 1:353688/149‑2 (MQ=38) cAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTa < 8:230460/148‑1 (MQ=255) aGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTACa < 3:352309/149‑1 (MQ=255) | GTGACTACCCCGGCGTACATGGAGGCCAAGTCGATCAGCGAGGCGGCGGGCGGGATCTACAAGCTGGTGGACCGAGTGCTGGAGCTGACGCACGAGTAACTTACTGCGTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTACA > NC_002947/5955676‑5955969 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |