| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,955,928 | A→T | 6.0% | intergenic (+154/+50) | elbB → / ← PP_5221 | putative hydrolase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,955,928 | 0 | A | T | 6.0% | 244.4 / 4.5 | 83 | intergenic (+154/+50) | elbB/PP_5221 | putative hydrolase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (36/42); new base T (2/3); total (38/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01 | |||||||||||
GTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTGCCCGCCCCCCACCTGGCC > NC_002947/5955783‑5956076 | gTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGcc < 5:345927/149‑1 (MQ=255) cttcttCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGc < 4:141314/149‑1 (MQ=255) tcttcGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCTCTGCCGGTgtt < 8:240962/148‑3 (MQ=255) tcttcGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCa > 2:40918/1‑149 (MQ=255) ttcGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATc > 1:15774/1‑149 (MQ=255) cgcgGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTTTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATc < 6:363666/147‑1 (MQ=255) cgcgGGCATGCCCGCGCCCACAGGTCCAGCGCAGGCGTCAAGGCCACGCGGTACCTGGGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGAGCGCTTGTAGGCGCGGGTTTACCCGCGAACACCGGCTCTGCCGGTgttcgc < 3:304038/147‑6 (MQ=255) gcgGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCAc > 3:192542/1‑149 (MQ=255) ggCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACcgc < 1:228832/149‑1 (MQ=255) gCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACcgcg > 1:149481/1‑149 (MQ=255) cccGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGc < 1:120287/149‑1 (MQ=255) gCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTg > 7:239483/1‑149 (MQ=255) ccACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTgg‑g < 2:319125/147‑1 (MQ=255) ccACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCt > 8:105764/1‑149 (MQ=255) ccACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCt > 2:237820/1‑149 (MQ=255) ccACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCt > 2:232357/1‑149 (MQ=255) ccACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCt > 7:317953/1‑149 (MQ=25) cacaGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTg > 3:99771/1‑149 (MQ=25) acaGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGt > 4:174601/1‑149 (MQ=255) caGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTc < 2:15774/149‑1 (MQ=255) aGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCg < 7:83642/149‑1 (MQ=255) gggccAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGc < 5:221640/146‑1 (MQ=255) gTCCAGCGCAGGCTTCAATGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGACAGCCCAG‑GCTGgcgcg < 1:353688/149‑2 (MQ=38) cAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTa < 8:230460/148‑1 (MQ=255) aGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACa < 3:352309/149‑1 (MQ=255) aGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAAt < 6:363460/149‑1 (MQ=255) gCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCt > 1:318442/1‑149 (MQ=255) cTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTg < 7:296972/149‑1 (MQ=255) aGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGc < 2:126617/149‑1 (MQ=255) cgcgGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGCGCTGTCGCCTACAGGAATCTGTCAGCCTTTc < 1:40918/149‑1 (MQ=255) cgcgGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTc > 6:181290/1‑148 (MQ=255) gctggaCCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCga < 8:317953/144‑1 (MQ=255) gTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCt > 8:37247/1‑111 (MQ=255) ccTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑Gcc < 2:149481/148‑1 (MQ=255) gtgGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCgggg > 4:110550/1‑148 (MQ=255) tgGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCa < 2:75472/149‑1 (MQ=255) ggCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCt < 2:251497/131‑1 (MQ=255) ggCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCt > 1:251497/1‑131 (MQ=255) aaCTGCGCGATCGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATc < 8:207707/149‑1 (MQ=255) cTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCg < 6:88879/149‑1 (MQ=255) cTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCg > 3:197673/1‑149 (MQ=255) tGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCgg > 1:164690/1‑149 (MQ=255) tGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCgg > 8:291175/1‑149 (MQ=255) cgcgATAGCCTGTGGGTCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCGGCTAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCTAGA‑GCCGGGCAATGATCCGGTc < 7:130239/149‑1 (MQ=255) cgcgATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCgg < 4:192542/147‑1 (MQ=255) cgcgATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTc < 8:71861/149‑1 (MQ=255) cgcgATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGCCAGCCTTTCGAGA‑GCCGGGCAATGATCCgg < 8:239483/147‑1 (MQ=255) tAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTg < 3:101854/149‑1 (MQ=255) tgGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTg < 3:110550/147‑1 (MQ=255) ggggCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGATGCCGGGCAATGATCCGGTCCAGTGCATTGGc < 1:232357/149‑1 (MQ=255) gggCAACTGCGGGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGATCCGGTTCCATCCACCGCGCCAGCCTTG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGATACGCCGGGCAATGATCCGGTCCAGTGCATTGGc < 1:237820/148‑1 (MQ=38) gggCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCa > 8:21773/1‑148 (MQ=255) cgcgATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTg < 7:105764/147‑1 (MQ=255) cgcgATCGATTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGtt > 6:385605/1‑149 (MQ=255) gCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCAc < 4:99771/148‑1 (MQ=255) cTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGt > 3:313793/1‑149 (MQ=255) cTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGt > 7:312922/1‑149 (MQ=255) cTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGt > 7:152638/1‑149 (MQ=255) ttGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGcc > 3:148633/1‑136 (MQ=255) ttGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGcc < 4:148633/136‑1 (MQ=255) gTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCg > 4:378335/1‑149 (MQ=255) gTAGGAGCGGGTTTACCAGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCg > 5:47498/1‑149 (MQ=255) aGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCa > 3:361954/1‑147 (MQ=255) gggTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGgc < 3:378335/149‑1 (MQ=255) tttACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGgccgc < 6:178639/149‑1 (MQ=255) cccGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTgc > 4:23588/1‑149 (MQ=255) ccGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGt < 4:336326/121‑1 (MQ=255) ccGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGt > 3:336326/1‑121 (MQ=255) ccGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTgcc > 8:175873/1‑149 (MQ=255) cgcgAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTgccc < 2:164690/149‑1 (MQ=255) gcgAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGTAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGgcc < 1:37083/140‑1 (MQ=255) gcgAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGgcc > 2:37083/1‑140 (MQ=255) cgAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTgcccgc < 3:174601/149‑1 (MQ=255) ggcacCGGCTCTGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTgcccgccc > 6:271532/3‑149 (MQ=255) acacCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTGCCCGcccc > 1:190332/1‑149 (MQ=255) cacCGGCTCTGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAg > 4:3885/1‑132 (MQ=255) cacCGGCTCTGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAg < 3:3885/132‑1 (MQ=255) acCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTGCCCGcccccc < 5:181290/149‑1 (MQ=255) cGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTGCCCGCCCCCCAc < 5:313196/149‑1 (MQ=255) cGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTGCCCGCCCCCCAc > 4:363894/1‑149 (MQ=255) cGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTGCCCGCCCCCCAc > 8:339358/1‑149 (MQ=255) ggCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTGCCCGCcccccccc > 6:22810/1‑149 (MQ=255) cAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTGCCCGCCCCCCACCTg < 1:87394/149‑1 (MQ=255) agagCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTGCCCGCCCCCCACCTgg < 8:152638/149‑1 (MQ=255) agCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAAAGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTGCCCGCCCCCCACCTGGcc > 6:184631/1‑149 (MQ=255) | GTTGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCGCAGGCTTCAAGGCCACGCGGTACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGG‑GCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGA‑GCCGGGCAATGATCCGGTCCAGTGCATTGGCAAACGCCTGTTTCTCACGTTCGCCATAGGCCGCCTGCCCGCCCCCCACCTGGCC > NC_002947/5955783‑5956076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |