| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,004,528 | A→C | 7.7% | T153P (ACC→CCC) | PP_5259 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,004,528 | 0 | A | C | 7.7% | 224.0 / 7.8 | 74 | T153P (ACC→CCC) | PP_5259 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (35/33); new base C (2/4); total (37/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.23e-01 | |||||||||||
CGAGTTTTGGCGTGCGCTGGTTGATCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTG > NC_002947/6004382‑6004676 | cGAGTTTTGGCGTGCGCTGGTTGATCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGATCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCAcc > 7:110459/1‑149 (MQ=255) ttttGGCGTGCGCTGGTTGATCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGTGCCCTGGc < 4:181019/149‑1 (MQ=255) ttttGACGTGCGCTGGTTGATCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGc > 4:142852/1‑149 (MQ=255) tGGCGTGCGCTGGTTGATCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGTGCCCTGGcca < 2:106739/148‑2 (MQ=255) tGGCGTGCGCTGGTTGATCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGTGCCCTGGcca < 8:204506/148‑2 (MQ=255) tGGCGTGCGCTGGTTGATCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCATTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGTGCCCTGGcca < 6:324833/148‑2 (MQ=255) gCGTGCGCTGGTTGATCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCggg < 4:34982/148‑1 (MQ=255) gCGTGCGCTGGTTGATCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCggg < 8:50081/148‑1 (MQ=255) cGTGCGCTGGTTGATCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCCCCTGGCCggggg > 8:173629/1‑149 (MQ=255) cTGGTTGATCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACtt < 8:198609/149‑1 (MQ=255) tCCCGCAGCTGAAGGGGTTTGTCTAACTGCAGGGCTATATCCACCTGGTCATTGGGTTCGAGATGGATCCGTTGGCCCTGGTGCAAGGCTGGGCTGACGTGGTGTTCTTGTATGGGCAGGTCACCTGGCCGGGGGC‑‑CACTTTCGTGGa < 8:110459/148‑1 (MQ=255) tCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCAGCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAg < 8:217465/149‑1 (MQ=255) tCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAg < 5:379847/149‑1 (MQ=255) tCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAg < 2:346958/149‑1 (MQ=255) ccTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTc > 7:299024/1‑149 (MQ=255) tCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTcgc > 1:289620/1‑149 (MQ=255) aGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCgag < 3:142510/149‑1 (MQ=255) ggTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCgaggag < 2:149491/149‑1 (MQ=255) ggTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCgaggag > 4:96876/1‑149 (MQ=255) tGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAggtg < 8:98181/148‑1 (MQ=255) ggCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGt < 7:334417/125‑1 (MQ=255) ggCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGt > 8:334417/1‑125 (MQ=255) gCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGgtggtg > 7:154792/1‑149 (MQ=255) gCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGgtggtg > 3:262070/1‑149 (MQ=255) gcacggcaATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGgtgt < 1:9383/149‑1 (MQ=255) acggcaATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGgtgtgt > 3:29113/1‑149 (MQ=255) ggcaATATCCACCTGGACATTCGCAACGTGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTAGCGAGGAGGTGGTGCCGGTGTGTgc > 6:78116/1‑149 (MQ=255) gcaATATCCACCGGGACATTCGCAACGAGCTGGAGCCGGTCGCCCGGCTGCAAGGCTCGGCTGACGGGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTgcg < 5:368282/149‑1 (MQ=255) ccACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAgc > 3:299095/1‑149 (MQ=255) aCCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAgctg > 5:55797/1‑149 (MQ=255) ccTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAgctgc < 4:262070/149‑1 (MQ=255) aCATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGcc > 3:32872/1‑149 (MQ=255) cATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCg > 3:333388/1‑149 (MQ=255) aTTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCgg > 6:180935/1‑149 (MQ=255) ttCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCggg > 7:259779/1‑149 (MQ=255) cGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGgcg > 3:216759/1‑149 (MQ=255) cGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGgc < 4:216759/148‑1 (MQ=255) aaCGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCgagta < 6:193841/107‑3 (MQ=255) tGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGc < 2:289620/148‑1 (MQ=255) gAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCg < 6:55797/148‑1 (MQ=255) aGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGt < 3:96876/149‑1 (MQ=255) gCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCgag > 2:265833/1‑147 (MQ=255) ccTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATTGCCAGGGCACCTGGCCGGGGGCCACACTTGCGTGGAGTTGTTTCGAGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCgag > 1:305731/1‑147 (MQ=255) ccTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGc > 2:364647/1‑149 (MQ=255) ctgctgCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCt > 5:31965/1‑149 (MQ=255) ctgctgCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCt < 7:94064/149‑1 (MQ=255) ctgcAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCAGTGCCGAGGAGCTgg < 2:315018/148‑1 (MQ=255) tgcAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGcc > 7:171314/1‑149 (MQ=255) gcAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGcc > 8:364286/1‑148 (MQ=255) gcAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGcc > 8:359419/1‑148 (MQ=255) gcAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGcc > 8:165564/1‑148 (MQ=255) gCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTg < 2:180270/149‑1 (MQ=255) gggtGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGtgc < 5:346435/146‑1 (MQ=255) ggCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGt < 5:180935/147‑1 (MQ=255) cTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGtgctg < 4:32872/149‑1 (MQ=255) gACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGtgctgct > 6:40677/1‑149 (MQ=255) aCGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGtgctgc < 8:154792/147‑1 (MQ=255) gtggtgTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGtgctgctgc > 4:22682/1‑148 (MQ=255) gtgtTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAg < 4:299095/149‑1 (MQ=255) gtgtTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAg > 6:45070/1‑149 (MQ=255) tgtTCTTCTATGGCGAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGc > 7:328253/1‑149 (MQ=255) tgtTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGc < 7:359419/149‑1 (MQ=255) gtTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGc < 7:364286/148‑1 (MQ=255) cttctATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCt > 5:94160/1‑149 (MQ=255) ttctATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTc > 8:41034/1‑149 (MQ=255) tctATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTc < 8:171314/148‑1 (MQ=255) tctATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGATGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTcg > 8:290490/1‑149 (MQ=255) ccggCCAGGTGCCCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCgcgc > 3:77175/3‑149 (MQ=255) tGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTcgcg < 6:150649/147‑1 (MQ=255) tGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTcgc < 2:361792/146‑1 (MQ=255) tGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGcc > 8:147889/1‑149 (MQ=255) ggCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGccc > 4:299676/1‑149 (MQ=255) gCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCg < 6:31965/149‑1 (MQ=255) cAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCg > 6:19979/1‑147 (MQ=255) aCCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTg < 4:29113/149‑1 (MQ=255) | CGAGTTTTGGCGTGCGCTGGTTGATCCCGCACCTCAAGGGGTTTGGCAAACGGCACGGCAATATCCACCTGGACATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGC‑‑CACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTG > NC_002947/6004382‑6004676 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |