| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,030,348 | T→A | 5.3% | intergenic (+33/+34) | PP_5729 → / ← rpmG | hypothetical protein/50S ribosomal protein L33 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,030,348 | 0 | T | A | 5.3% | 231.8 / 2.6 | 76 | intergenic (+33/+34) | PP_5729/rpmG | hypothetical protein/50S ribosomal protein L33 |
| Reads supporting (aligned to +/- strand): ref base T (38/34); new base A (2/2); total (40/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.44e-01 | |||||||||||
GGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCGGTGGTGTAGAAGTGG > NC_002947/6030202‑6030496 | ggCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTc > 3:282546/1‑149 (MQ=255) ccGCACCCGGGTGGTCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCg > 6:20816/1‑148 (MQ=255) ccGGGTGGTCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCACCAGCCAAAAAAAACCCCGCCTCCGTTCCGATCCgg > 8:278515/1‑149 (MQ=255) ccGGGTGGTCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCgg < 2:86130/149‑1 (MQ=255) ggtggtCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑tt < 4:118117/149‑1 (MQ=255) tCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑ttttttt > 1:74613/1‑149 (MQ=255) tCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑tttttt > 8:226294/1‑148 (MQ=255) aaCGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGc > 8:96399/1‑149 (MQ=255) aaCGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTATTTTCAGGTCGc > 7:71234/1‑149 (MQ=255) cGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGcc > 2:63840/1‑148 (MQ=255) gAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTCCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGAAGCGGG‑TTTTTTTCAGGTCGCCg > 2:202576/1‑148 (MQ=255) aaaTGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGa > 6:339311/1‑148 (MQ=255) aaTGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGAt > 8:295747/1‑148 (MQ=255) tgCACCCGCGAGTACGACGTCGAGCGCATCGAGATCATGGCTGGTGCGGACCTGCTGATCCAGTGCTTCGACTTCAACTGACCCTGGAACAGCCAAAAAAAAACCGGCCTGCTTTCGTATGCGGG‑TTTTTTTCAGGTCGCCGATCAAt < 8:49583/148‑1 (MQ=255) ccGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACtt > 4:21984/1‑148 (MQ=255) tACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTgg < 3:72331/149‑1 (MQ=255) cgacgTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGc < 2:74613/148‑1 (MQ=255) gacgTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCtt > 2:68821/1‑149 (MQ=255) gacgTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTATTTCAGGTCGCCGATCAATTACTTGATCTTGGCtt > 3:367507/1‑149 (MQ=255) acgTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTc < 7:295747/149‑1 (MQ=255) cgTCGAGCGGATCCAGATCAAGGCCGGTGGCGACCTGCTGATCCATGGGTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGGCGATCAATTACTTGATGTTGGCTTcc < 4:367507/149‑1 (MQ=255) cgTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTcc > 7:259396/1‑149 (MQ=255) tCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCtt < 1:68821/149‑1 (MQ=255) gAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTTACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGt < 7:226294/149‑1 (MQ=255) gAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTg > 8:108508/1‑148 (MQ=255) gAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGt < 5:93682/149‑1 (MQ=255) cgcATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTg > 2:390310/1‑136 (MQ=255) cgcATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTg < 1:390310/136‑1 (MQ=255) cATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTAcacc < 3:21984/149‑1 (MQ=255) ccAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGa > 4:214380/1‑126 (MQ=255) ccAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGa < 3:214380/126‑1 (MQ=255) atggCCGGTTCCGACCTGCTGATCAAGGGATTCGACTTCAACTTCACCTGCAACAGACAAAAAAACACCCGCCTCCTTTCGCATGCGTG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGc < 8:13326/147‑1 (MQ=255) aaGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTcc < 3:246147/130‑1 (MQ=255) aaGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTcc > 4:246147/1‑130 (MQ=255) aGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGc > 7:144284/1‑148 (MQ=255) aGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCg < 5:20816/149‑1 (MQ=255) gCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGaa > 4:318472/1‑149 (MQ=255) gCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCATCCGAAAGGAGGCGGG‑tttttt < 8:19680/92‑1 (MQ=25) aCCTGCTTATCCAGGGCTTCGAATTCAACTTACCCTTCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGa < 6:307956/138‑1 (MQ=255) aCCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGATTGCGa > 5:307956/1‑138 (MQ=255) ctgctgATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCat < 7:108508/149‑1 (MQ=255) ctgctgATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCat > 6:348752/1‑149 (MQ=255) gctgATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCTCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTcc > 3:244810/1‑113 (MQ=255) gctgATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCTCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTcc < 4:244810/113‑1 (MQ=255) ctgATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATAATAtt > 3:187928/1‑149 (MQ=255) tgATCCAGGGCTTCGACTTCAACTGACCCTGCCACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATAttt < 8:162811/149‑1 (MQ=255) gATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTc > 2:98597/1‑149 (MQ=255) aTCCAGGGCTTCGACTTCAACTGACCCTTCAACAGCCAAAAAAAAACCCGCCTCCATTCGGATGCGGG‑TTGTTTTCAGCTCGCAGATAAAATACTTGATCTTGGCTTCCTGGTACACAACGTGCTTACGAACAACCGGATCATATTTCt > 7:244858/1‑149 (MQ=255) cAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTg < 5:339311/148‑1 (MQ=255) cAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGa > 5:34543/1‑149 (MQ=255) cAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTATTGa < 8:71234/149‑1 (MQ=255) gACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGAttt > 1:354616/1‑149 (MQ=255) ttCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTg > 7:22672/1‑148 (MQ=255) tGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCgggg > 1:210455/1‑149 (MQ=255) aCCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGggtg < 1:98597/149‑1 (MQ=255) ccTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCTTATTTCTTGATGTCGATTTTGTCCGGggtggt > 8:324062/1‑149 (MQ=255) cTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGgtggtg > 3:246379/1‑149 (MQ=255) tGCAACAGACAAAAAAAAACCCGCCTCGTTTCGGATGCGGG‑TTTTTTTCAGTTCGCCGAACAATTAATTGATATTGGCTTCGTTGTAAACCACGTGATTGCGAACACCCGCATCATATTTGTGTATGTCGATTTTTTCCGGGTTGTTgc > 4:49548/1‑149 (MQ=255) cAACAGCCAAAAAAAAACCCGCCTCCTTTAGGATGGGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCGTCCTTGTACACCACGTGCTTGCGAACAACCGGATGATATTTCTTGATCTCGATTTTGTCCGGGggggtgggg > 2:288790/1‑146 (MQ=255) cAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTg < 2:354616/149‑1 (MQ=255) gCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGtt < 3:49548/149‑1 (MQ=255) ccAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTc < 5:348752/149‑1 (MQ=255) ctgaaaaaaaCCCGCATCCGAAAGGAGGCGGGTTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGggtggt > 6:84743/4‑139 (MQ=37) ctgaaaaaaaCCCGCATCCGAAAGGAGGCGGGTTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGggtggt < 5:84743/136‑1 (MQ=37) aaaaaaacaCCATCCTCCTTTCGGATGAGGG‑TTTTTTTCAGGTCGCCGATAAATTAGTTGATCTTGGCTTCCTTGTACACCACGTTCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGGCCGGGGGGGTTCGCTTGTTCtt < 8:244858/149‑1 (MQ=255) aaaaaaaaaCCCGCCTGCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCtt < 4:282546/149‑1 (MQ=255) aaaaaaaaaCCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCTCCGATCAATTACTTGATCTTGGCTTCCTTGTACTGCACGTGCTTGCGTACATCCGGATCATATTTCTTGATGTCGATTTTGTCCGGGGTGGTGCGCTTGTTCtt < 1:202576/149‑1 (MQ=255) aaaaaaaaaCCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCtt > 1:109287/1‑149 (MQ=255) aaaaaaaaaCCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCtt < 8:144284/149‑1 (MQ=255) gaaaaaaaCCCGCATCCGAAAGGAGGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTg > 6:79755/2‑149 (MQ=39) aaCCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCggtg < 6:34543/149‑1 (MQ=255) aaCCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCggtg < 6:353566/149‑1 (MQ=255) cccGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCggtggt < 8:259396/149‑1 (MQ=255) cccGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCggtggt < 1:288790/149‑1 (MQ=255) gCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCGgtggtg > 2:2585/1‑147 (MQ=255) ctcctTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCGGTGGTGTAg > 8:129266/1‑148 (MQ=255) ttCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCGGTGGTGTAGAAGTgg > 2:80806/1‑149 (MQ=255) | GGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAACCCGCCTCCTTTCGGATGCGGG‑TTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCGGTGGTGTAGAAGTGG > NC_002947/6030202‑6030496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |