| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 475,304 | G→A | 5.9% | A67A (GCC→GCT) | rpsU ← | 30S ribosomal protein S21 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 475,304 | 0 | G | A | 5.9% | 262.5 / 3.7 | 85 | A67A (GCC→GCT) | rpsU | 30S ribosomal protein S21 |
| Reads supporting (aligned to +/- strand): ref base G (36/44); new base A (3/2); total (39/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.63e-01 | |||||||||||
CCCATGATGCAGTTCGCATGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTCGCAGGAGCGCT > NC_002947/475165‑475446 | cccATGATGCAGTTCGCATGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACggcgcggcgc > 6:132886/1‑149 (MQ=255) cATGATGCAGTTCGCATGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTg > 7:80830/1‑149 (MQ=255) gatgCAGTTCGCATGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTc > 6:113437/1‑149 (MQ=255) gatgCAGTTCGCATGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACAGCGCCGCGCCGTTc > 1:129976/1‑149 (MQ=255) tgCAGTTCGCATGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTcgc < 2:30243/149‑1 (MQ=255) tgCAGTTCGCATGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACAGCGCCGCGCCGTTcgt < 2:129976/149‑2 (MQ=255) gTTCGCATGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCt > 5:350896/1‑148 (MQ=255) gTTCGCATGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTg < 4:294937/149‑1 (MQ=255) gCATGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACAGCGCCGCGCCGTTcgtct < 6:289380/143‑4 (MQ=255) gCATGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACAGCGCCGCGCCGTTcgtct > 5:289380/1‑140 (MQ=255) aTGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAAcg < 6:4641/123‑1 (MQ=255) aTGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAAcg > 5:4641/1‑123 (MQ=255) tGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTc > 5:88781/1‑149 (MQ=255) aaGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCtt < 8:330241/149‑1 (MQ=255) aGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTg < 2:136003/149‑1 (MQ=255) aGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTg < 2:280130/149‑1 (MQ=255) tgCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGa > 2:370781/1‑149 (MQ=255) tgCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGa > 4:339155/1‑149 (MQ=255) cAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGAc < 5:132886/148‑1 (MQ=255) cAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACg > 4:209091/1‑149 (MQ=255) aGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGc < 2:357483/149‑1 (MQ=255) ggCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCt > 5:282287/1‑127 (MQ=255) ggCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCt < 6:282287/127‑1 (MQ=255) acTTGAGC‑AGCTAGCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTaa > 3:130493/2‑149 (MQ=255) agctagct‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAAcagc < 1:203915/148‑1 (MQ=255) agctagct‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAAcagc < 3:83702/148‑1 (MQ=255) agctagct‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAAcag > 8:101924/1‑147 (MQ=255) gct‑gctCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAAcagcagca < 6:88781/147‑1 (MQ=255) t‑gctCAAGTTTGAAACGACGAGTGCCATCGCCCGGGGGTTAGCCGGGCAGGTCAGAAGCTTTGCGTTGAACGCCTGTATTATTACAGACGAACGGCGCGGCGCTGTTCgcgc < 8:231721/112‑1 (MQ=255) t‑gctCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAgctg > 5:231517/1‑149 (MQ=255) t‑gctCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAgctg > 6:36480/1‑149 (MQ=255) t‑gctCAAGTTTGAAACGACAACTGCCATCGCACGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCgcgc > 7:231721/1‑112 (MQ=255) ctCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAgctgct > 4:87479/1‑149 (MQ=255) tCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCtt > 2:66529/1‑149 (MQ=255) tCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCtt > 5:218871/1‑149 (MQ=255) aaGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCttt < 5:36480/148‑1 (MQ=255) aaGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTg > 3:279295/1‑149 (MQ=255) aaGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTg < 3:302866/149‑1 (MQ=255) aGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTgc < 1:370781/149‑1 (MQ=255) aGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTgc < 7:205039/149‑1 (MQ=255) aGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTgc < 7:311589/149‑1 (MQ=255) gTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTgcg < 4:130493/149‑1 (MQ=255) tttGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTgc > 1:334270/1‑147 (MQ=255) tGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCt < 2:1708/148‑1 (MQ=255) gAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCtt < 3:209091/148‑1 (MQ=255) cGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGct > 8:365711/1‑149 (MQ=255) aCCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGctct < 3:174826/149‑1 (MQ=255) ccACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTg < 1:66529/149‑1 (MQ=255) cACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGc > 2:88004/1‑149 (MQ=255) ccATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTc < 1:145004/148‑1 (MQ=255) aTCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGc > 2:13836/1‑149 (MQ=255) cccGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTtct > 5:308931/1‑149 (MQ=255) cccGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTtct < 3:285761/149‑1 (MQ=255) ccGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTtctc < 1:88004/149‑1 (MQ=255) gggggTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGt < 5:113437/149‑1 (MQ=255) ggggTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTa < 7:101924/149‑1 (MQ=255) gggTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTaa < 3:87479/149‑1 (MQ=255) tAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACt > 6:319656/1‑149 (MQ=255) gCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAgctg > 8:263972/1‑108 (MQ=255) gCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAgctg < 7:263972/108‑1 (MQ=255) ccGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTcgc < 2:334270/149‑1 (MQ=255) ccGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTcgc < 7:336467/149‑1 (MQ=255) cGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTcgcg < 1:13836/149‑1 (MQ=255) ggcagggcagAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTAc > 5:77829/1‑116 (MQ=255) ggcagggcagAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTAc < 6:77829/116‑1 (MQ=255) gcagggcagAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGc > 7:227058/1‑148 (MQ=255) gcagAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGaa < 8:80830/149‑1 (MQ=255) tGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAg > 6:140351/1‑149 (MQ=255) agAACTCCTGAATTAGTACAGACGAACGGCGCGCCGCTGTTAGCGCTGAACTTTCATGGCGTCACGCTTAACAGCAGCAGCTGCTTAGCGCTTACGCTCTGCGGTCGCCTTCTCGTAAAACTCGCGGATAAGAACTTCAGCCAGTacac > 4:119657/2‑149 (MQ=255) cGCCTGTATTAGTACAGACGAACGGCGCGTCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGc < 3:247668/149‑1 (MQ=255) gCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCt > 3:175531/1‑149 (MQ=255) ccTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGCCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCtt > 5:225245/1‑149 (MQ=255) cTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCttt > 1:119931/1‑149 (MQ=255) tATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCttttt < 2:119931/148‑1 (MQ=255) tATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTc < 3:339155/149‑1 (MQ=255) aTTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTc < 4:161258/148‑1 (MQ=255) aTTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTc > 3:161258/1‑148 (MQ=255) ttAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTCGc < 1:188919/149‑1 (MQ=255) aGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTCGCa < 6:350896/148‑1 (MQ=255) gTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGc < 3:256056/126‑1 (MQ=255) gTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTCGCAg < 6:308931/148‑1 (MQ=255) gTACAGACGAACGCCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAAAACCAGCAGCTGCTTTGCGCATACGCTCTGCGGTCGGCTTCTCCTAAAACACGCGGCTACGAACTTCAGc > 4:256056/1‑126 (MQ=255) cAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTCGCAGGa < 7:365711/147‑1 (MQ=255) cAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTCGCAGGAgc > 3:114252/1‑149 (MQ=255) gcgcGAACAGCGCCGCGCCGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTCGCAGGAgag > 5:263012/4‑147 (MQ=255) aGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTCGCAGGAgcg > 3:341490/1‑149 (MQ=255) aCGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTCGCAGGAGCGCt > 3:310811/1‑149 (MQ=255) aCGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTCGCAGGAGCGCt < 2:268658/149‑1 (MQ=255) | CCCATGATGCAGTTCGCATGAAGCTTGTGCAGGGCCTTGAGCTAGCT‑GCTCAAGTTTGAAACGACCACTGCCATCGCCCGGGGGTTAGCCGGGCAGGGCAGAAGCTTTGCGTTGAACGCCTGTATTAGTACAGACGAACGGCGCGGCGCTGTTCGCGCTGAACTTTCTTGGCGTGACGCTTAACAGCAGCAGCTGCTTTGCGCTTACGCTCTGCGGTCGGCTTCTCGTAAAACTCGCGGCTACGAACTTCAGCCAGTACACCGGCTTTTTCGCAGGAGCGCT > NC_002947/475165‑475446 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |