| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,166,470 | G→T | 5.2% | intergenic (‑229/‑451) | PP_5406 ← / → PP_5407 | transposase/TnsD‑like transposition protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,166,470 | 0 | G | T | 5.2% | 274.9 / 3.7 | 87 | intergenic (‑229/‑451) | PP_5406/PP_5407 | transposase/TnsD‑like transposition protein |
| Reads supporting (aligned to +/- strand): ref base G (38/44); new base T (3/2); total (41/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.00e-01 | |||||||||||
CTGCGGGCAGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGC > NC_002947/6166322‑6166613 | cTGCGGGCAGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAgg < 5:122159/149‑1 (MQ=255)cTGCGGGCAGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAgg > 5:22893/1‑149 (MQ=255) cGGGCAGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTc < 8:181976/148‑1 (MQ=255) cGGGCAGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCg > 4:299505/1‑149 (MQ=255) cGGGCAGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCg > 2:95843/1‑149 (MQ=255) gCAGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAGTGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCAc > 7:49689/1‑149 (MQ=255) aGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACtt > 4:311756/1‑149 (MQ=255) gTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTgg < 3:172789/149‑1 (MQ=255) gTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTgg > 4:186903/1‑149 (MQ=255) gcgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAGTGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCttt < 8:49689/149‑1 (MQ=255) gcgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCttt > 4:192211/1‑149 (MQ=255) gcgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCttt < 1:204482/149‑1 (MQ=255) gcgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCttt < 3:336422/149‑1 (MQ=255) gcgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCttt < 1:357380/149‑1 (MQ=255) tttCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTc < 3:192211/149‑1 (MQ=255) tttCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAAGGCCC‑AAGTGCGACCTTGGGCCCTTGtg < 8:1525/149‑2 (MQ=255) ccGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTa < 5:100950/148‑1 (MQ=255) ccGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTAt > 4:126840/1‑149 (MQ=255) cGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATc < 6:255782/149‑1 (MQ=255) gTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTg < 7:296044/149‑1 (MQ=255) ggATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTc > 1:184981/1‑149 (MQ=255) ggATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTc > 6:237564/1‑149 (MQ=255) gcgGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGCGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGAACTTGGGACTTTGTCTATCTGATTTCCatctc > 5:274850/1‑144 (MQ=255) gagaTTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCtctc < 8:10803/149‑1 (MQ=255) gaTTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGctagagg > 1:332513/1‑144 (MQ=255) cTTGTGGATTAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACATTGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTta < 7:356200/148‑1 (MQ=255) ttGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTtagc > 7:185691/1‑149 (MQ=255) tgGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTtagctag < 6:13525/149‑1 (MQ=255) tgGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTtagcta < 3:299505/148‑1 (MQ=255) tgGAAGAGCGAATCCGTTCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTtagctag < 3:263067/149‑1 (MQ=255) ggATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTtagcta < 1:95843/148‑1 (MQ=255) gATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTagctagct > 5:186895/1‑149 (MQ=255) gCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCtctc < 2:313234/132‑1 (MQ=255) aTCCGTGTGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGa < 3:378961/149‑1 (MQ=255) aTCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTgtcgt < 5:251422/145‑1 (MQ=255) aTCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTgtcgt > 6:251422/1‑145 (MQ=255) tCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGaa < 6:263637/149‑1 (MQ=255) cGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAAt < 8:81191/148‑1 (MQ=255) cGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAAtttct < 6:22893/148‑1 (MQ=255) gAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTATGACTTATCCACAAGGGCCC‑AAGGTCTCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAAtttcttt < 7:119333/149‑1 (MQ=255) aaaCTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCCGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAAtttctttc < 8:149979/149‑1 (MQ=255) aCTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGt > 3:206729/1‑149 (MQ=255) aCTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGt < 5:270334/149‑1 (MQ=255) cgtGACGTTTCACATGCAATGGATTGACAATGTAGCAGTCAGGGGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTATATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGtt < 6:274850/147‑1 (MQ=255) gTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCt < 6:186895/149‑1 (MQ=255) ttCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTAc > 7:195588/1‑149 (MQ=255) acaTGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCt < 4:206729/148‑1 (MQ=255) aTGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAg < 7:105/149‑1 (MQ=255) aTAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTccg > 6:330675/1‑149 (MQ=255) gACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑GAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTccgcc > 2:147046/1‑148 (MQ=255) aCAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGc > 8:336905/1‑138 (MQ=255) aCAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGc < 7:336905/138‑1 (MQ=255) aCAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGa > 3:574/1‑149 (MQ=255) aCAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGa > 3:200742/1‑149 (MQ=255) aCAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTATCCGCCGa > 3:246954/1‑149 (MQ=255) aaTGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGAtt > 3:86608/1‑149 (MQ=255) tGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATtgt > 1:142809/1‑149 (MQ=255) ggaggaGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATtgt > 4:258816/1‑148 (MQ=255) gaggagTCAGGTGCCTTTTCTTACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATtgtg < 4:194853/148‑1 (MQ=255) gaggagTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATtgtg < 3:186903/148‑1 (MQ=255) gTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTg > 7:232302/1‑149 (MQ=255) gTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTGGGGCGTTTGAGTTGGTGTTTTCCAGCGGGGAGGTTTAGGTAGGTGAGGTAGTATTTTGTTTCGTTTGGTGTACCTATGGCGAGTCGCCCGATTGGGaagttg > 8:136900/1‑144 (MQ=255) tCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTg < 3:311756/148‑1 (MQ=255) aGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGcc < 8:185691/148‑1 (MQ=255) aGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGcc < 4:200742/148‑1 (MQ=255) aGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGcc < 4:574/148‑1 (MQ=255) aGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATATGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCATAGGCGTCTCCGCCGATTGTGATCTTgac > 5:8190/1‑146 (MQ=255) tGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACg > 8:270568/1‑149 (MQ=255) tGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTAACTTAGACGACTCCGCCGATTATCATATTGcaaac > 8:180822/1‑144 (MQ=255) ttttCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCtt < 2:149570/113‑1 (MQ=255) ttttCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCtt > 1:149570/1‑113 (MQ=255) ttCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCa < 5:237564/147‑1 (MQ=255) cTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGa < 3:126840/148‑1 (MQ=255) ttATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCCCGAGCCCtt > 8:167561/1‑149 (MQ=255) ttATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCtt > 1:50647/1‑149 (MQ=255) ttATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCt > 7:195087/1‑148 (MQ=255) gatagacaAAGGCCC‑AAGTGCGACCTTGGGCCCTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTATACCATATGCGTCGGCGCCGATTGTGATGTTGCCCACCCTCACCAGcccat > 2:342513/6‑146 (MQ=25) cacaAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCt < 3:321336/143‑1 (MQ=255) cacaAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCt > 4:321336/1‑143 (MQ=255) acaAAGGCCC‑AAGTGCGACCTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTtctct > 3:77879/1‑147 (MQ=255) aaaggCCC‑AAGTGCGACCTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTACCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAgg > 5:266483/4‑149 (MQ=255) aaGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAgc > 8:358461/1‑148 (MQ=255) aGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTTGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGc > 2:302854/1‑149 (MQ=255) gCCC‑AAGTTCGCACTTGTGCGTTTTTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCtt < 7:180822/148‑1 (MQ=255) ccc‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGGCCTTCTCTCAGGCTTCg < 2:142809/149‑1 (MQ=255) cc‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTcac < 1:8504/149‑3 (MQ=255) cc‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGc < 2:50647/149‑1 (MQ=255) cc‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGc < 5:330675/149‑1 (MQ=255) cc‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGc > 1:108643/1‑149 (MQ=255) ggTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTg > 6:13264/1‑112 (MQ=255) ggTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTg < 5:13264/112‑1 (MQ=255) | CTGCGGGCAGGTAACCGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCC‑AAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGC > NC_002947/6166322‑6166613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |