| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 478,986 | G→C | 6.0% | R161R (CGC→CGG) | cca ← | multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 478,986 | 0 | G | C | 6.0% | 218.7 / 4.1 | 67 | R161R (CGC→CGG) | cca | multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase |
| Reads supporting (aligned to +/- strand): ref base G (31/32); new base C (2/2); total (33/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.04e-01 | |||||||||||
CGAGCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCGTTCTTG > NC_002947/478838‑479133 | cGAGCTCAGGCAGCAGCTCCTGCAGCCCCCCACACGCGCTCAGCACATTGAA‑GAATACCTGCCGTTGCACTTCCAACAGCGCGCGCTCGATTACCTTCCAGCTGCGCTCGGC‑AGTCAGTCCATGCAGTTCGCCTCAGGCGATGATCTgg > 4:316109/1‑149 (MQ=255) gAGCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGTACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGgc < 7:184480/149‑1 (MQ=255) gAGCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGgc < 1:208443/149‑1 (MQ=255) gAGCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGgc < 3:316109/149‑1 (MQ=255) aGCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGgc > 1:96262/1‑149 (MQ=255) gCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGgcgc < 5:24959/149‑1 (MQ=255) gCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGgcg > 6:24959/1‑148 (MQ=255) aGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCa < 4:136940/149‑1 (MQ=255) aGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCa < 4:142699/149‑1 (MQ=255) gcagcaGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAgc > 4:200772/1‑149 (MQ=255) agcagcTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATGCGCCAGATCAgcgc < 4:158134/149‑1 (MQ=255) agcagcTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATGCGCCAGATCAgcgc < 3:216964/149‑1 (MQ=255) gcagcTCCTGCCGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTGCATCAGAGCGCGCTGGATTTCCTTCCAGCTGCGCTCGGG‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAgcgc > 3:247521/1‑148 (MQ=255) gcTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAg < 2:85431/149‑1 (MQ=255) tCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGGACTTCCATCAGCGCGCGCTCGCTTTCCTTCCACCTGCGCTCGGG‑AGTGAGTGCCTGCAGTTCGCCTGCGGCGCTGATCTGGCGCCTCAGCGCCAAGGt > 1:286536/1‑149 (MQ=255) ccTGCAGGGCCCCCCCCGCGCTCAGCACCTAGAA‑GAATACCGGCGGTTGCACGTCCATCCGCGCGCGCGCGCTTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGtt < 8:144655/149‑1 (MQ=255) aGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGTGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATc > 1:254070/1‑149 (MQ=255) gCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCgg > 4:166849/1‑148 (MQ=255) ccccACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGc > 8:200564/1‑148 (MQ=255) cccACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCaa < 8:275702/149‑1 (MQ=255) acGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCg > 2:23916/1‑148 (MQ=255) cTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAAccc < 5:233776/149‑1 (MQ=255) cACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCCGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGTCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAgt < 8:244842/148‑1 (MQ=255) cACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAgtg > 8:231627/1‑149 (MQ=255) cACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCGCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCGGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAgtg < 2:286536/149‑1 (MQ=255) cTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAgtggtg > 7:110423/1‑149 (MQ=255) ttGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGc > 6:290748/1‑149 (MQ=255) cTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGgcag > 5:131984/1‑149 (MQ=255) tGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGgcag > 2:336972/1‑148 (MQ=255) cGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGgcagca < 2:39455/148‑1 (MQ=255) ggTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCaaa < 7:200564/149‑1 (MQ=255) aCTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTg > 2:246805/1‑148 (MQ=255) aCTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGc < 3:200772/149‑1 (MQ=255) aCTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGAGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCCGCGCCAAGGTTTCATCGGCAACCCGGAACCCGAGTGGTGCCTAACGGGCAGCAAAGCGtt > 1:62898/1‑147 (MQ=255) ccATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAAc < 6:131984/148‑1 (MQ=255) cATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTACGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAAcgc > 1:301746/1‑149 (MQ=255) aTCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAAcgcg > 3:139724/1‑149 (MQ=255) tCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCGAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTg > 1:69015/1‑142 (MQ=255) tCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTg < 2:69015/141‑1 (MQ=255) tCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACgcgc < 1:246805/149‑1 (MQ=255) aGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCg > 2:382925/1‑120 (MQ=255) gcgcgcgcTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCgcag > 6:133766/1‑148 (MQ=255) gcgcgcTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCAc > 5:89439/1‑149 (MQ=255) cttccAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCtt > 5:340271/1‑149 (MQ=255) ttccAGCTGCGCTCGGC‑CCTGAGTGCCTGCAGTTCGCCGGAGGCGCGTCTCTGGCGCATCAGCGCCTAGGTTTCATCGGCAACCCGGCACCCCAGTGGTGCGTAACGGGCAGCAAAGCGGGCAACGCGCAGCACCCGCAAAGGATCTTc < 4:247521/149‑1 (MQ=255) ttccAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGt < 3:220202/120‑1 (MQ=255) ttccAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGt > 4:220202/1‑120 (MQ=255) ttccAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTc > 5:4745/1‑149 (MQ=255) ccAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTc < 2:96262/147‑1 (MQ=255) ccAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTc < 1:62636/147‑1 (MQ=255) gcTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGGGGTGCGTAACGGGCAGCAAAGCGTGCACCGCGCAGCACCCGCCAAGGATCTTCGGCGCATGcc > 2:233189/1‑149 (MQ=255) cTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCg < 5:290748/149‑1 (MQ=255) cTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCg < 6:4745/149‑1 (MQ=255) tCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCgg > 1:382118/1‑149 (MQ=255) ggC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCggg < 2:20012/148‑1 (MQ=255) gtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTACCGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCATAGGATCTTCGGCGAATGCCGGGGAAACATg < 1:233189/148‑1 (MQ=255) tgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCCGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGc < 1:336972/149‑1 (MQ=255) ccTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGATACATGGCg > 4:341659/1‑148 (MQ=255) ccTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGt < 3:166849/149‑1 (MQ=255) ccTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGt < 2:254070/149‑1 (MQ=255) cTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGa < 7:318166/138‑1 (MQ=255) cTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGa > 8:318166/1‑138 (MQ=255) cAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGc < 6:89439/148‑1 (MQ=255) ttCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAAt < 6:118796/124‑1 (MQ=255) ttCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGc > 7:207823/1‑149 (MQ=255) ccTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGtt > 2:370425/1‑148 (MQ=255) cTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGAt > 2:146982/1‑108 (MQ=255) cTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGAt < 1:146982/108‑1 (MQ=255) cTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGa < 4:139724/149‑1 (MQ=255) ttggCGCTGATGCGCCAGATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATc > 3:21119/3‑149 (MQ=255) aGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATcc < 5:316478/149‑1 (MQ=255) ggCGCTGATGCGCCAGATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATc > 3:196850/1‑147 (MQ=255) gcTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGaa > 2:177104/1‑45 (MQ=255) gcTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGaa < 1:177104/45‑1 (MQ=255) ggCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCGTTCTTg > 6:123574/1‑149 (MQ=255) | CGAGCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAA‑GAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGC‑AGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCGTTCTTG > NC_002947/478838‑479133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |