| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 122,215 | C→G | 6.3% | intergenic (+25/+36) | katE → / ← PP_0116 | hydroperoxidase/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 122,215 | 0 | C | G | 6.3% | 234.8 / 3.8 | 74 | intergenic (+25/+36) | katE/PP_0116 | hydroperoxidase/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (36/33); new base G (2/3); total (38/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TAAAGGAGGACAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCAAAG > NC_002947/122069‑122363 | tAAAGGAGGACAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCcct > 3:351824/1‑149 (MQ=255) ggaggaCAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCcctcct > 5:80318/1‑148 (MQ=255) gaCAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATg > 5:19326/1‑148 (MQ=255) gaCAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATg > 3:294664/1‑148 (MQ=255) cAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAg > 7:333018/1‑149 (MQ=255) ggggCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAg > 3:312120/1‑149 (MQ=255) ggggCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAg > 1:54715/1‑149 (MQ=255) ggggCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAg > 2:17549/1‑149 (MQ=255) ggCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCg > 4:91337/1‑149 (MQ=255) cTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCggg < 3:91337/149‑1 (MQ=255) cTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCggg < 4:343240/149‑1 (MQ=255) ttGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAATCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTAGGGGGTAAACCCCCTCCTGATGTAGGAGCGGGt < 8:214348/147‑1 (MQ=255) ttGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGt < 3:176438/147‑1 (MQ=255) cTCGGTGATGATCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGTGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTAc < 2:266968/148‑1 (MQ=255) cTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTAcc > 8:15093/1‑149 (MQ=255) ggggATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTAccc < 2:307536/147‑1 (MQ=255) gggATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCcgc > 3:249606/1‑148 (MQ=255) gATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCGTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGaa < 5:27801/149‑1 (MQ=255) gCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGtt < 7:318439/149‑1 (MQ=255) aGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTTATGTAGGAGCGGGTTTACCCGCGAAGCGTTTa < 7:4958/149‑1 (MQ=255) aGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTa < 6:80318/149‑1 (MQ=255) aGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTActg > 2:113860/1‑149 (MQ=255) aGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTAc > 7:273728/1‑143 (MQ=255) aGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTAc < 8:273728/143‑1 (MQ=255) gATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCg > 6:335653/1‑149 (MQ=255) gATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCg > 7:107887/1‑149 (MQ=255) cTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGAc > 8:152453/1‑148 (MQ=255) tttGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGAc > 4:156977/1‑147 (MQ=255) gTCAAAGCGGTTCATGGCAACCGGGTGTGGGAGCGGGAGGCGGCGGGTGAAGCTGTTCCTGCCTGTCAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACGCGCGAAGCGTTTACTGCTGATGCGGGACCAGc < 5:39506/148‑1 (MQ=255) cAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGGGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGcac > 1:125367/1‑148 (MQ=255) aaaGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGcacca > 7:341097/1‑149 (MQ=255) aGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCaccacc < 6:19326/149‑1 (MQ=255) gCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCt < 4:249606/149‑1 (MQ=255) tAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGc < 4:312120/149‑1 (MQ=255) ccACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCagc < 3:313584/149‑1 (MQ=255) cACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCagcg > 7:202574/1‑149 (MQ=255) aCCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCagcga < 4:351824/149‑1 (MQ=255) aCCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCagc > 4:219206/1‑147 (MQ=255) gtgtGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCt < 2:54715/149‑1 (MQ=255) tgGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGTGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTgg < 4:294664/148‑1 (MQ=255) gAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCt < 3:219206/149‑1 (MQ=255) ggAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGcacc < 3:377902/116‑1 (MQ=255) ggAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGcacc > 4:377902/1‑116 (MQ=255) aGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAtgctt < 5:137067/149‑1 (MQ=255) ggcggcTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAtgcttctgc < 1:113860/149‑1 (MQ=255) cggcTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAtgcttctgctt < 7:152453/149‑1 (MQ=255) ggcTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAtgcttctgcttc < 1:17549/149‑1 (MQ=255) tGAAGCTGTTCCTGCCTGACAAGGACTTTTCGCGGGTAAACACCCTCCTGAAGTAGGAGCGGGTTTACCCCCGAATCGTTTAATGCTGATTCCGGACCAGCAACCCCAGTGCCGGCAGCCAGCGCATGAtatgattcatatgattcat > 6:40758/1‑147 (MQ=255) aaGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTTCCCGCGAAGCGTTTACTGCTGATGCGGGTCCAGCCCCACCAGTGCCGGCAGCGAGCGCTGGATCTGATTGTTCTGGTTACGCTc > 4:347368/1‑149 (MQ=255) aGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTc > 3:67346/1‑148 (MQ=255) gCTGTTCGTGCCTGTGATGGTGTTTTGGCGGGTTTACGCGCTCGTGATGTTGGTGCGGGTTTACCCGCGTAGCGTTTAGTGGTGATGGGGGAGGAGCACCAGCTGTGGCGGCTGCGAGCGCTGGATCTGATGCTTCTGCTTCAGGTCg < 4:67346/148‑1 (MQ=255) gTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAAcc > 7:247287/1‑149 (MQ=255) ttCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAAcc > 4:49685/1‑148 (MQ=255) tgcctgACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTg > 6:150351/1‑149 (MQ=255) gcctgACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGt > 1:138072/1‑149 (MQ=255) cctgACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGt > 7:358892/1‑148 (MQ=255) aCAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAAt < 2:125367/148‑1 (MQ=255) aCAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATc > 1:144266/1‑149 (MQ=255) aCAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATc > 3:103197/1‑149 (MQ=255) aaGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCtt < 7:15093/149‑1 (MQ=255) ggCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTgc < 8:341097/149‑1 (MQ=255) cTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCa > 7:31751/1‑149 (MQ=255) cTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCa > 3:123199/1‑149 (MQ=255) ttttCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCgg < 1:175503/68‑1 (MQ=255) ttttCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCAc > 5:385651/1‑149 (MQ=255) ttttCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCAc > 6:186350/1‑149 (MQ=255) tCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCAcgc < 3:156977/148‑1 (MQ=255) cgcgGGTAAACCCGCTCCTACATCAGGAGGGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCAcgc < 3:311616/147‑1 (MQ=38) gcgGGTAAACCCGCTCCTACATCAGGAGGGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTgc < 4:310924/140‑1 (MQ=38) gcgGGTAAACCCGCTCCTACATCAGGAGGGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTgc > 3:310924/1‑140 (MQ=38) gcgGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAAc > 1:272296/1‑124 (MQ=255) gcgGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAAc < 2:272296/124‑1 (MQ=255) gggTAAACCCGCTCCTACATCAGGAGGGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCAACTGTCAATCTTGCGCACGCGCttt > 6:50296/1‑149 (MQ=38) gTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTc < 3:347368/149‑1 (MQ=255) aaCCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAGCCCACTGTCAATCTTGCGCACGCGCTTTTCCAg > 8:187078/1‑149 (MQ=255) aaCCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCa < 4:103197/148‑1 (MQ=255) ccccTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCaa < 8:107887/149‑1 (MQ=255) cctcctGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCAAAg > 8:239248/1‑149 (MQ=255) | TAAAGGAGGACAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCAAAG > NC_002947/122069‑122363 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |