| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 558,483 | A→G | 6.7% | E23E (GAA→GAG) | rplR → | 50S ribosomal protein L18 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 558,483 | 0 | A | G | 6.7% | 214.8 / 4.6 | 74 | E23E (GAA→GAG) | rplR | 50S ribosomal protein L18 |
| Reads supporting (aligned to +/- strand): ref base A (35/34); new base G (2/3); total (37/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.88e-01 | |||||||||||
CCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGCGGCCACTAAG > NC_002947/558336‑558630 | ccTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACCTCGAAg > 8:207778/1‑149 (MQ=255) ttACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTc > 5:166840/1‑149 (MQ=255) ttACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTc > 1:76225/1‑149 (MQ=255) aCAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTc < 4:377613/147‑1 (MQ=255) aggtaaaggtGTGCGTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACTACAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTgc < 1:310468/149‑1 (MQ=255) ggtaaaggtGTGCGTTACGCGGACGAAGTAGTGCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTgcgc > 1:243543/1‑149 (MQ=255) ggtaaaggtGTGCGTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTgcatc < 8:335049/149‑4 (MQ=255) ggtaaaggtGTGCGTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGcc > 2:63815/1‑149 (MQ=255) taaaggtGTGCGTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTgcatctt < 8:5556/149‑6 (MQ=255) aaaggtGTGCGTTACGCGGACGAAGTAGT‑ACGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGAACGAC‑A‑AAAAAGTTATTAGACTGCGTCGCGCTCGGAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCtgt > 7:242128/1‑149 (MQ=255) aggtGTGCGGTACGCCGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAACCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGc < 4:298292/149‑1 (MQ=255) cGTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTc < 5:29949/148‑1 (MQ=255) gTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCg > 6:362480/1‑149 (MQ=255) gTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCg > 7:283241/1‑149 (MQ=255) gTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCg < 3:241458/149‑1 (MQ=255) gTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCg > 8:218140/1‑149 (MQ=255) cgcgGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGctcc > 2:194749/1‑149 (MQ=255) cgcgGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGctcc < 1:340785/149‑1 (MQ=255) gACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCgc < 2:113325/149‑1 (MQ=255) gAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCgcag > 5:261516/1‑148 (MQ=255) agtagt‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCgcagca > 6:349427/1‑148 (MQ=255) aagaagCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAgg < 1:63815/148‑1 (MQ=255) agaagGCAAGATGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTTCGCCCAGGt < 8:335622/148‑1 (MQ=255) aagCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGGCGCAAGATGCACGCACTCGAAGTCGTGCGCCTGTGCGTGTGCCGATGCTCTCCGCAGATCTACGCCCAGGTCAt > 4:292642/1‑149 (MQ=255) ccAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGAGTCGCGCTCGCAAAGCCCGTCTCAAGATGCACGCACTCGAAGTCGTGCGCCTGTGCGTGTTCAGCTCCTCGCAGCACATCAACGCCGAGGTCATTTc > 2:244314/1‑149 (MQ=255) caaagaagaagTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTc < 3:193621/147‑1 (MQ=255) cAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGc < 8:105329/107‑1 (MQ=255) cAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGc > 7:105329/1‑107 (MQ=255) aagaagaagTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACTAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCgg > 6:127149/1‑149 (MQ=255) aagaagaagTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCgg > 2:284057/1‑149 (MQ=255) gaagaagTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGcc < 6:261516/149‑1 (MQ=255) gaagaagTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGcc > 3:303613/1‑149 (MQ=255) gaagTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGAc > 5:124105/1‑149 (MQ=255) gaagTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGAc < 5:29649/149‑1 (MQ=255) aagTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACg > 4:203179/1‑149 (MQ=255) gTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACgg > 4:35065/1‑148 (MQ=255) tAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGgca < 2:77137/149‑1 (MQ=255) ccTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAg < 7:207778/149‑1 (MQ=255) actGACCGAC‑A‑AAAACGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTGCt < 8:242128/145‑1 (MQ=255) aaTGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTg < 2:243543/148‑1 (MQ=255) aCCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCaa < 5:333567/148‑1 (MQ=255) aCCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAg < 7:218140/149‑1 (MQ=255) a‑aaaaaGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAGCTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTc > 4:227694/1‑149 (MQ=255) a‑aaaaaGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTc > 5:186030/1‑149 (MQ=255) aaaaaGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTc > 1:304069/1‑148 (MQ=255) aaaaGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGa > 4:86648/1‑149 (MQ=255) aaGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGAcc < 5:349427/149‑1 (MQ=255) ttATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTg < 2:201650/149‑1 (MQ=255) tATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTgc < 1:47982/59‑1 (MQ=37) tATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTgc > 2:47982/1‑59 (MQ=37) ttCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACTAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGa < 5:127149/148‑1 (MQ=255) ttCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACTAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGAc < 3:35065/149‑1 (MQ=255) cGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCt < 6:1544/149‑1 (MQ=255) cgcgCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCg < 5:362480/149‑1 (MQ=255) tCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTg < 7:314749/112‑1 (MQ=255) tCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTg > 8:314749/1‑112 (MQ=255) gCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATg < 5:249534/147‑1 (MQ=255) aaaGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGgcgc > 8:168750/1‑149 (MQ=255) aaaGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGgcgc > 7:138055/1‑149 (MQ=255) aaaGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGgcgc > 5:8615/1‑149 (MQ=255) aaaGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGgcgc > 6:254287/1‑149 (MQ=255) aCGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTg < 8:283241/149‑1 (MQ=255) aCGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTg > 4:73971/1‑149 (MQ=255) gTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTgg > 6:275125/1‑148 (MQ=255) gTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGc < 2:76225/149‑1 (MQ=255) gTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGc < 6:166840/149‑1 (MQ=255) tcAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCaa > 4:269836/1‑148 (MQ=255) aaGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAg > 6:394555/1‑121 (MQ=255) aaGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAg < 5:394555/121‑1 (MQ=255) gcgCACGACTTCGAGTTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGa > 1:233919/3‑149 (MQ=255) aTGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGa < 3:86648/149‑1 (MQ=255) gAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGCGGc < 1:244314/149‑1 (MQ=255) tCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACaaa > 8:193504/1‑107 (MQ=255) tCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACaaa < 7:193504/107‑1 (MQ=255) aaGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGCGGCCACTAAg < 7:168750/149‑1 (MQ=255) | CCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGT‑CCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGAC‑A‑AAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGCGGCCACTAAG > NC_002947/558336‑558630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |