| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 592,234 | A→T | 7.5% | intergenic (‑74/‑29) | PP_0502 ← / → PP_0503 | hypothetical protein/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 592,234 | 0 | A | T | 7.5% | 225.8 / 7.4 | 80 | intergenic (‑74/‑29) | PP_0502/PP_0503 | hypothetical protein/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base A (35/39); new base T (3/3); total (38/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.82e-01 | |||||||||||
TCAGCGCCCAACGGTCACCCAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATGGCTGCTGAGTTGGGAGTG > NC_002947/592088‑592382 | tcaGCGCCCAACGGTCACCCAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAAtt < 5:308016/149‑1 (MQ=255) cgcCCAACGGTCACCCAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGaaa < 8:238363/149‑1 (MQ=255) cgcCCAACGGTCACCCAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGaaa < 2:201042/149‑1 (MQ=255) gcCCAACGGTCACCCAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAAc < 3:146619/149‑1 (MQ=255) cccAACGGTCACCCAGTACCTCCAGAGCCCGTGGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAAc > 1:41463/1‑149 (MQ=255) cccAACGGTCACCCAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAAcc < 8:195285/149‑1 (MQ=255) cAACGGTCACCCAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAAc > 2:13387/1‑146 (MQ=255) cAACGGTCACCCAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGCCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAATTTGAAACCac < 1:26055/149‑2 (MQ=255) aaCGGTCACCCAGTACCTCCAGAGCCGG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACGACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTGAAAGTGAAAc > 8:215137/1‑145 (MQ=255) aCGGTCACCCAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGAt < 8:254481/149‑1 (MQ=255) gTCACCCAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTc > 6:33442/1‑148 (MQ=255) tCACCCAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCa < 8:293946/149‑1 (MQ=255) cccAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCagag < 4:369719/149‑1 (MQ=255) ccAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAgg > 1:33800/1‑149 (MQ=255) ccAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAgg > 5:47803/1‑149 (MQ=255) cAGTACCTCCATACCCCG‑CGCGACGGGGCACAGCGCATTGTTTTCATCGAGCATGGGTCAAGCCTGTCTTGATTATCTTGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGt < 8:176386/149‑1 (MQ=255) cAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGt > 6:90532/1‑149 (MQ=255) aGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGtt > 7:300730/1‑149 (MQ=255) tACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTg > 8:49081/1‑149 (MQ=255) tACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTg < 1:14015/149‑1 (MQ=255) cTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGaaa < 6:337063/128‑1 (MQ=255) cTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGaaa > 5:337063/1‑128 (MQ=255) cAGAGCGCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGAt < 4:56507/149‑1 (MQ=255) cAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCg < 8:327758/147‑1 (MQ=255) cAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGAt < 8:93044/149‑1 (MQ=255) cAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGAt < 5:223396/149‑1 (MQ=255) gagCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGa < 1:13387/149‑1 (MQ=255) agCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGac < 5:33442/149‑1 (MQ=255) tACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCTATGACACCTTCGCt > 7:262252/1‑149 (MQ=255) gCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGacac > 5:176865/1‑148 (MQ=255) aCTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCt < 5:90532/149‑1 (MQ=255) cgcATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGa > 2:1037/1‑148 (MQ=255) tttCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGt > 4:269865/1‑149 (MQ=255) tttCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGt > 3:154395/1‑149 (MQ=255) tCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGttgctt > 4:351993/1‑149 (MQ=255) tCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGttgctt < 7:134686/149‑1 (MQ=255) cATGGGGCAAGCCTGTCCTGTTTTTCTGGTTGCAGATTAAATACACATTTGCTAAATAGCCAGAGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTTccac < 4:255248/149‑1 (MQ=255) aTGGGGCAACCCTGTCTTGATTAGCGGGTTGCATATTAAAACCACATTTGCTAAATAGCCAGCGAGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCAGACACGCTGGATAACCCTGTTGCTTGccacc < 6:273839/149‑1 (MQ=255) ccTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCaa < 8:31007/149‑1 (MQ=255) tCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATgg < 8:122435/148‑1 (MQ=255) tCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATgg > 7:122435/1‑148 (MQ=255) ttGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGTGGG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCg > 1:295945/1‑149 (MQ=255) gATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCACAATGGCGGTg > 3:41341/1‑149 (MQ=255) aTTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GGATTTCAAATTGAAACCAGATTCCAGAGGTTAGCCCGGTGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACAACCAGCGCAAAGGCGGtc > 1:97010/1‑148 (MQ=255) aTTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTg < 8:300730/148‑1 (MQ=255) ttATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTgg < 2:33800/148‑1 (MQ=255) tCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGAc > 6:33626/1‑149 (MQ=255) gTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGgtg > 5:147585/1‑149 (MQ=255) gTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGgt < 3:269865/148‑1 (MQ=255) gTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCACCGCCATTGCGCTggtggt < 2:184013/145‑5 (MQ=255) tGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGgtgt > 3:351172/1‑148 (MQ=255) gCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTAc > 8:180326/1‑149 (MQ=255) gATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTc < 2:41463/149‑1 (MQ=255) aTTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCg < 6:176865/149‑1 (MQ=255) ttAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCACTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGc > 7:230664/1‑149 (MQ=255) aaCCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCaa > 7:271326/1‑149 (MQ=255) aaCCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCACGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTCCCACCACCAGAGCAATGGCGGAGGAGACGGTGTACTTAGCTCaa > 7:124585/1‑149 (MQ=255) aCCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAAc < 7:49081/149‑1 (MQ=255) aCCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCACAATGGCGGTGGCGACGGTGTACTTCGCTCAAc < 4:41341/149‑1 (MQ=255) ccACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAAcc > 3:282377/1‑149 (MQ=255) acaTTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCgc > 1:388519/1‑149 (MQ=255) gCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCtt > 4:149966/1‑148 (MQ=255) gCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCtt < 2:388519/148‑1 (MQ=255) aaTAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGa < 1:1037/146‑1 (MQ=255) aaTAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAg < 3:195267/147‑1 (MQ=255) aaTAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTc > 7:55533/1‑149 (MQ=255) aaTAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCACTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAg < 8:230664/147‑1 (MQ=255) tAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGa < 6:47803/149‑1 (MQ=255) ccAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATgg < 2:295945/149‑1 (MQ=255) ccAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATgg > 2:285689/1‑149 (MQ=255) aGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATGgct > 6:362536/1‑149 (MQ=255) atct‑gG‑TTTCAATTTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCgg < 3:287603/99‑1 (MQ=255) atct‑gG‑TTTCAATTTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCgg > 4:287603/4‑102 (MQ=255) tct‑gG‑TTTCAATTTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATGgctgct > 3:181125/3‑148 (MQ=255) tct‑gG‑TTTCAATTTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATGgctg > 5:116384/3‑146 (MQ=255) tct‑gG‑TTTCAATTTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATGgctg < 6:116384/144‑1 (MQ=255) t‑gG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATGGCTGCTGa < 7:180326/148‑1 (MQ=255) t‑gG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATCGAGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATGGCTGCTGAg > 5:29506/1‑149 (MQ=255) tttCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATGGCTGCTGAGTTg > 5:235840/1‑149 (MQ=255) tCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATGGCTGCTGAGTTgg < 4:282377/148‑1 (MQ=255) aaaTTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATGGCTGCTGAGTTGGGa < 4:351172/148‑1 (MQ=255) aTTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATGGCTGCTGAGTTGGGAGTg > 5:110107/1‑149 (MQ=255) aTTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTGGAGTCGATGGCTGCTGAGTTGGGAGTg > 6:317372/1‑149 (MQ=255) | TCAGCGCCCAACGGTCACCCAGTACCTCCAGAGCCCG‑GGCTACGGGGCACTGCGCATTGTTTTCATCGAGCATGGGGCAAGCCTGTCTTGATTATCTGGTTGCAGATTAAAACCACATTTGCTAAATAGCCAGCGTGT‑GG‑TTTCAAATTGAAACCAGATTCCAGAGGTTTGCCCGATGACACCTTCGCTGACACGCTGGATAACCCTGTTGCTTGCCACCACCAGCGCAATGGCGGTGGCGACGGTGTACTTCGCTCAACCGCTGCTTGAGTCGATGGCTGCTGAGTTGGGAGTG > NC_002947/592088‑592382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |