| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 650,238 | C→A | 7.5% | intergenic (‑82/+18) | accB ← / ← aroQ‑I | acetyl‑CoA carboxylase biotin carboxyl carrier subunit/type II 3‑dehydroquinate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 650,238 | 0 | C | A | 7.5% | 241.2 / 7.9 | 80 | intergenic (‑82/+18) | accB/aroQ‑I | acetyl‑CoA carboxylase biotin carboxyl carrier subunit/type II 3‑dehydroquinate dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (37/36); new base A (2/4); total (39/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.55e-01 | |||||||||||
CTCCAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAGTGGTGACGGAAC > NC_002947/650091‑650382 | ctcCAGCTCCTCGATGCCAGACTCTTCCAGCAGCCCGATCACTTTCTAGACTTTACGGAAACCCATTAATCACCAACTCCCAA‑AGGCTCCGTCAGGCCGCGAAAT‑ACAAAAAACGTATCTCAAACGTTTCTCTCGAACCCCGGCCCACt < 6:61005/149‑1 (MQ=255) ccAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCGATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAGAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACt > 4:156524/1‑147 (MQ=255) cAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACt < 8:70146/146‑1 (MQ=255) cAGTTCGTCGATGCCAGACTCTCCCAGCAGCTCAATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACt < 8:227748/146‑1 (MQ=255) gTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGc < 8:228729/149‑1 (MQ=255) cgtcgATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑TCAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCa < 1:95383/148‑1 (MQ=255) gtcgATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAgg < 1:338/149‑1 (MQ=255) tcgATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCGATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAGAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAggg < 3:156524/149‑1 (MQ=255) gATGCCACACTCTTCCACCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCCAAATAAAAAAAAACGTATCTGAAACGTTTCTCTCGAACCCTGGCCTAAGTGGGCCGGGGt < 1:101930/149‑1 (MQ=255) ccAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCTGGCCTAAGTGGGCCGGGGttcgag < 2:75533/149‑5 (MQ=255) ccAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCTGGCCTAAGTGGGCCGGGGttcgag < 3:223933/149‑5 (MQ=255) ccAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtc < 4:218610/148‑1 (MQ=255) cAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtcat > 6:209837/1‑149 (MQ=255) cAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtcat < 1:164328/149‑1 (MQ=255) aGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAGGGGTTCGGTCAGGGGGCGAAAT‑AAAAAAAACGTATCTAAAACTTTTATATCGAACCCCGGCCCAATAAGGCCAGGGttttaa > 1:310637/1‑146 (MQ=255) tctTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCTGGCCTAAGTGGGCCGGGGttc > 4:381350/1‑139 (MQ=255) tctTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCTGGCCTAAGTGGGCCGGGGttc < 3:381350/140‑2 (MQ=255) cagcagCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtc < 2:167349/137‑1 (MQ=255) cagcagCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtc > 1:167349/1‑137 (MQ=255) agcagcTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCtg > 1:61536/1‑149 (MQ=255) gcagcTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCtgt < 5:184844/149‑1 (MQ=255) cagcTCGATCTGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTGAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtc < 7:305274/134‑1 (MQ=255) cGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTg > 3:168312/1‑149 (MQ=255) gATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGtt < 1:147383/147‑1 (MQ=255) gTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATATGAAAAGTTTCTCTCGAACCACGTCCCACTTAGGCCAGGGTTTTCATCATTTGTGCTGTGCTGTGGAAGc > 8:258043/1‑148 (MQ=255) tttCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGc > 2:295860/1‑147 (MQ=255) tttCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCa < 3:62669/149‑1 (MQ=255) ttGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCACTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAgttg > 1:8803/1‑149 (MQ=255) tttACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTc > 4:337462/1‑147 (MQ=255) ggATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGTGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGcgcg < 1:342655/149‑1 (MQ=255) ggATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGc < 3:271693/130‑1 (MQ=255) ggATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGc > 4:271693/1‑130 (MQ=255) aTTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAg > 1:168262/1‑149 (MQ=255) aTTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAg < 4:325583/149‑1 (MQ=255) ttAATCATCAACTCCCAA‑AGGTTCGGTAAGTGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAgg < 7:258043/149‑1 (MQ=255) ttAATCATCAACTCCCAA‑AGGTTCCGTCAGGGGCCGAAAT‑ACAAAAAACGTATCTGAAACGTATATCTCGAACCCCGGCCCACTAAGGCCAGGGTTTTCATCATTTGGGATGAGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAgg > 3:87884/1‑149 (MQ=255) atcaACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAgg < 2:61536/149‑1 (MQ=255) cTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCACTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATa < 2:8803/149‑1 (MQ=255) ccAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATaa < 5:209837/147‑1 (MQ=255) ccAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAccc > 4:215220/1‑149 (MQ=255) ccAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAAcc > 2:358153/1‑149 (MQ=255) ccAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAAcc > 4:17166/1‑149 (MQ=255) ccAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAAcc > 5:9419/1‑149 (MQ=255) ccAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAAcc > 5:299247/1‑149 (MQ=255) aa‑aGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGc > 6:368693/1‑135 (MQ=255) aa‑aGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGc < 5:368693/135‑1 (MQ=255) aa‑aGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGc < 6:30858/149‑1 (MQ=255) gTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGgc > 2:283443/1‑149 (MQ=255) ggTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGcc < 2:168262/148‑1 (MQ=255) gTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCa < 3:187796/149‑1 (MQ=255) ggtcGAAAT‑AGAAATTACGTATCTGAAACGTTTCTCTCTAAGCCCGGACCAGTTATGCCAGGTTTTTCATCATTTGGTCTGTGAGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAAGCGCTGGCGCGCAGTCCGc < 8:309991/146‑1 (MQ=255) gCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCg > 6:141382/1‑146 (MQ=255) gAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTc > 6:16140/1‑110 (MQ=255) gAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTc < 5:16140/110‑1 (MQ=255) aT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGc > 3:116377/1‑142 (MQ=255) aT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGc < 4:116377/142‑1 (MQ=255) aT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCAc > 3:130385/1‑149 (MQ=255) t‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCAcc > 2:120766/1‑149 (MQ=255) aCAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCAccc > 5:153572/1‑149 (MQ=255) aaaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCg < 3:275393/137‑1 (MQ=255) aaaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCg > 4:275393/1‑137 (MQ=255) aaaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCAcccc > 8:236056/1‑148 (MQ=255) aaaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTATCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCAcccc > 6:300364/1‑148 (MQ=255) aaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTa > 3:64529/1‑149 (MQ=255) gTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCaa > 7:50642/1‑149 (MQ=255) gAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCg > 7:202406/1‑148 (MQ=255) aaaCGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACAt < 4:130385/145‑1 (MQ=255) aaaCGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCgg > 6:250087/1‑148 (MQ=255) aaaCGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCg < 3:337462/147‑1 (MQ=255) aCGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGaaa < 6:121988/149‑1 (MQ=255) ctctcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTACAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAg < 3:215220/148‑1 (MQ=255) tcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGa < 6:9419/147‑1 (MQ=255) tcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGa < 2:310637/147‑1 (MQ=255) tcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAgt > 4:202894/1‑149 (MQ=255) tcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAgt > 7:316159/1‑149 (MQ=255) tcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAgt > 7:18062/1‑149 (MQ=255) gAACCCCGGCCCACTTCCGCCAGGGTTTTCATCATTTGGGCGCTGCGTTGGCAGCCAGTTGTTCCAGCGCGGCCTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAACGTAGGAgtgg < 4:87884/149‑1 (MQ=255) gAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGGTCCAGCGCGGACTCCAGGGCCAGGCGCTACCCGCTGGCGCCCAGACCGCAGATAACCCCTACGGCAACATCGGAAAAGTAGGAgagg > 7:327046/1‑149 (MQ=255) cccGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAGTGGTGAc < 6:153572/149‑1 (MQ=255) cccACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAGTGGTGACGGAAc > 3:376240/1‑149 (MQ=255) | CTCCAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAA‑AGGTTCGGTCAGGGGGCGAAAT‑ACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAGTGGTGACGGAAC > NC_002947/650091‑650382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |