| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 788,583 | A→T | 6.2% | intergenic (+33/‑180) | ettA → / → gdhA | ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 788,583 | 0 | A | T | 6.2% | 228.1 / 4.5 | 81 | intergenic (+33/‑180) | ettA/gdhA | ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (41/35); new base T (2/3); total (43/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.53e-01 | |||||||||||
CGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCT > NC_002947/788439‑788729 | cGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTg < 3:267211/149‑1 (MQ=255) gtggtgTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTgg < 4:135368/149‑1 (MQ=255) gtgtTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGccc < 1:299855/149‑1 (MQ=255) ttcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑Atttt > 7:197952/1‑149 (MQ=255) ttcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCAC‑Atttt > 5:93874/1‑149 (MQ=255) cGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCACTTGGGGCCCC‑Attc < 2:303187/146‑2 (MQ=255) gAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑Attttt < 2:161966/147‑1 (MQ=255) gAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑Attttt > 1:161966/1‑147 (MQ=255) aaGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAAAATG‑GGGCCACTTGGGGCCCC‑ATTCTtgt‑g < 7:53596/149‑1 (MQ=39) aGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑Gc < 1:307257/149‑1 (MQ=255) ggTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑Gcc > 2:310918/1‑149 (MQ=255) aaCTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTgg > 3:130174/1‑149 (MQ=255) aCTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAAAATG‑GGGCCACTTGGGGCCCC‑ATTCTTGT‑Gcatcag < 4:213162/149‑6 (MQ=38) cTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCGC‑ATTTTTGT‑GCCTGGCg > 3:213252/1‑149 (MQ=255) ccGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCg < 6:383640/149‑1 (MQ=255) gAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGc > 4:132547/1‑148 (MQ=255) cGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAATAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATaaa < 4:35838/149‑1 (MQ=255) aaGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGATATCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATg > 6:255437/1‑149 (MQ=255) aaGCCGACCGCAAGAAGCGGCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATg < 5:383277/149‑1 (MQ=255) aGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATgg < 6:357838/149‑1 (MQ=255) gACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATggcgag > 2:188780/1‑149 (MQ=255) aCCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATggcgagg > 4:302656/1‑149 (MQ=255) cGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATggcgaggc > 3:327786/1‑148 (MQ=255) cGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCA‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATggctaggc > 8:326419/1‑148 (MQ=255) cGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCACCAAGTGGCCAC‑ATTTTTGT‑GCCTGGAGGACCGCTTGAAATggcgaggc > 6:384674/1‑148 (MQ=255) cAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGACTG‑GGGCCCGAAGTGGCGCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAATTggcgaggcg > 4:227616/1‑147 (MQ=255) cAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTGTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATggcgaggcg > 6:185090/1‑147 (MQ=255) cAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACAGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGaa > 2:117850/1‑149 (MQ=255) cGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTAt < 1:117850/149‑1 (MQ=255) tCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTAttt > 1:113273/1‑149 (MQ=255) gggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGGTTTCTGATGCACAAGAATG‑GGGCCCCAGGTGGCCCC‑AGTTTTGT‑GCCTGGCGGGCCGCGAGAAAGGGCGAGGCGAAGGGGTATTTGGt > 4:283070/1‑149 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGta < 7:326419/149‑1 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGt < 4:130174/148‑1 (MQ=255) gATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCACTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATac < 7:182431/149‑1 (MQ=255) aTGCTGCTTCCCATGCGCACCGTGTACGGCAAAATAAACTGGCCCAGTAAGCCGGTTTTCTTATTCACAAGAATGTGGCCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGtata < 1:310918/148‑1 (MQ=255) aTGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATaca > 6:12396/1‑149 (MQ=255) tgctgctgcCCAGCAGCACCGTTTACGGCACAAGACACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑CGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATacac < 8:179493/149‑1 (MQ=255) ctgctgcCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACtt < 2:113273/149‑1 (MQ=255) tgctgcCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTa > 8:43647/1‑149 (MQ=255) ctgcCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTAc < 2:251249/148‑1 (MQ=255) gggcAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCGATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACAt > 8:218871/4‑148 (MQ=255) ccAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATaa > 2:108621/1‑148 (MQ=255) cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATaaaa < 1:368362/149‑1 (MQ=255) gCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTGTTGT‑GCCTGGCGGACCGCGATAAAGGGCGAGGCGAAGGTGGAGTTTGGATACACTTACATaaaaag > 4:258135/1‑147 (MQ=255) cGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCGC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCa < 4:213252/149‑1 (MQ=255) aCCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCAcc > 5:27273/1‑148 (MQ=255) gCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCa < 1:376422/149‑1 (MQ=255) acaAGAAACTGGCCCTGTAAGCCGGTTTTCTGAAGCAGAAGAATG‑GGGCCCCAACTTGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTc < 4:11602/146‑1 (MQ=255) acaAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGTATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaa > 7:287283/1‑148 (MQ=255) acaAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAACAATG‑GGGCCAAAACTGGACCC‑AAATTAGT‑GCCTGGCGGACCGCAATAAATCGCGAGGCGAAGCTGAATTTTTTATACACAAACAAAAAAAGCAACAAAAAAttac > 3:11602/1‑144 (MQ=255) aaGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaaaa > 5:324936/1‑148 (MQ=255) aaGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATCGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAAAGCACCAAATAATTTCaaaa > 7:72544/1‑148 (MQ=255) gAAACTGGCCCAGTAAGCCGGTTTTCTGATTCACAAGAATT‑GGGCCCAAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATTGCGATTCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaaaaaaa < 3:253702/149‑1 (MQ=255) aaaCTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAAc > 1:167928/1‑149 (MQ=255) aaCTGGGCCAGTAAGGAGTTTTTCTGATGCACAAGAATG‑GGGCCCAAAGTGTCCCC‑ATTTTTGT‑GCATGGCGGACCGCTATAAATGGCGAGGCGAATGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAAc < 5:255437/148‑1 (MQ=255) aGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGCCCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAACAAAGACATTTCGaccga > 6:37605/1‑147 (MQ=255) aGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGGGAGGCGAAGGTGTATTTTGTATAGACTTACATGAAAGGGACCAAATAATTTCAAAAAAACGGCATTTCGcggta > 4:328966/1‑145 (MQ=255) gCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTAt > 6:121833/1‑149 (MQ=255) cGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTc < 3:132547/149‑1 (MQ=255) aTGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAt < 1:188780/148‑1 (MQ=255) gCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGc > 8:344353/1‑149 (MQ=255) gCACAAAAATG‑GGGCCACTTGGGGCCCCGATTCTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTCACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTg > 1:23999/1‑149 (MQ=255) aaGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCGTATTCCGGTGCGATTGcttct > 3:317996/1‑149 (MQ=255) aaGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTg < 7:52338/138‑1 (MQ=255) aaGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTg > 8:52338/1‑138 (MQ=255) aaGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttct > 5:151934/1‑149 (MQ=255) gAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGGGTATTTTGTATACACTTACATAACACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg < 5:185090/149‑1 (MQ=255) aaaTG‑GGGCCACTTGGGGCCCC‑ATTCTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg > 1:267420/2‑149 (MQ=255) aTG‑GGGCCCCAAGTGGCCCC‑ATTTTTGTAGCGTGGCGGACCGCTATAAATGGCCAGCCGAAGGTGTATTTTGta > 1:22533/1‑74 (MQ=255) aTG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGt < 6:93874/149‑1 (MQ=255) aTG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGt < 6:324936/149‑1 (MQ=255) aTG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGt < 2:167928/149‑1 (MQ=255) g‑gggCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTa > 4:94952/1‑148 (MQ=255) gggCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttctt > 3:196837/1‑143 (MQ=255) gggCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttctt < 4:196837/143‑1 (MQ=255) gggCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACa > 4:330287/1‑149 (MQ=255) ccccAAGTGGCCCC‑ATTTTTGT‑TCCTGTCGTACCGCTATAAATGTCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTc < 5:384674/149‑1 (MQ=255) ccccAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTc < 6:27273/149‑1 (MQ=255) ccAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCt < 4:327786/149‑1 (MQ=255) cAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGct > 1:326638/1‑133 (MQ=255) cAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGct < 2:326638/133‑1 (MQ=255) | CGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATG‑GGGCCCCAAGTGGCCCC‑ATTTTTGT‑GCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCT > NC_002947/788439‑788729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |