| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 812,297 | T→C | 8.3% | intergenic (‑46/‑182) | PP_0698 ← / → PP_0699 | LysR family transcriptional regulator/LysE family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 812,297 | 0 | T | C | 8.3% | 171.9 / 4.8 | 61 | intergenic (‑46/‑182) | PP_0698/PP_0699 | LysR family transcriptional regulator/LysE family transporter |
| Reads supporting (aligned to +/- strand): ref base T (22/33); new base C (2/3); total (25/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.39e-01 | |||||||||||
TGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGT > NC_002947/812157‑812443 | tgagtgaCGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCATTTTCATGATATCCCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACAt < 1:85565/149‑1 (MQ=255)tgagtgaCGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATg < 2:106761/149‑1 (MQ=255) gagtgaCGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATgg > 4:306647/1‑149 (MQ=255) agtgaCGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATgg < 8:203346/148‑1 (MQ=255) gtgaCGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGcc < 6:61460/149‑1 (MQ=255) gtgaCGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGcc < 4:155296/149‑1 (MQ=255) tgaCGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCca > 3:251998/1‑149 (MQ=255) aCGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TTAACCCGCTCCTACATGGCcaca > 5:378810/1‑149 (MQ=255) cAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGGCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGGTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATAttt < 1:235487/149‑1 (MQ=255) aGTGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTcc < 5:337615/149‑1 (MQ=255) gTGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTccc < 6:378810/149‑1 (MQ=255) tGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCt < 5:334718/149‑1 (MQ=255) tCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTg > 7:226198/1‑147 (MQ=255) cgcgcACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAg < 7:292546/149‑1 (MQ=255) gcgcACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAgg < 4:251998/149‑1 (MQ=255) cACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGttt < 2:133762/149‑1 (MQ=255) cGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTAc < 4:163071/149‑1 (MQ=255) cGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTAc < 8:39294/149‑1 (MQ=255) gAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTcc < 6:53853/111‑1 (MQ=255) gAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTcc > 5:53853/1‑111 (MQ=255) gAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTAcc > 4:120400/1‑149 (MQ=255) aGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAGCCTGCCTT‑‑GGCCTCTTCGCGGG‑TAAACCTGCCCCTACAGGGAAATATGTGGCCATGTAGGAGCGGGTTTAccc < 5:226497/149‑1 (MQ=14) gCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCCTTGGCCTCTTCGCGGG‑TAAACCTGCCCCTACAGGGAAATATGTGGCCATGTAGGAGCGGGTTTAccc < 7:276700/149‑1 (MQ=17) ctctCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCcgc > 4:29174/1‑148 (MQ=255) cGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAaga < 8:226198/149‑1 (MQ=255) gTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCTGCCCCTACAGGGAAATATGTGGCCATGTAGGAGCGGGttt > 3:117912/1‑136 (MQ=18) gTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCTGCCCCTACAGGGAAATATGTGGCCATGTAGGAGCGGGttt < 4:117912/136‑1 (MQ=18) gTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAgg > 3:225690/1‑149 (MQ=255) cggcAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATCATAT‑CCCTGTTCAG‑CTGGGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAaggc < 5:52943/149‑1 (MQ=255) gcAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCGCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAaggcag < 7:249776/149‑1 (MQ=255) aTGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCt < 5:78098/149‑1 (MQ=255) gTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCCGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACACGCGAAGAGGCCAAGGCAGGCTg > 7:161645/1‑148 (MQ=255) aGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACata > 7:359390/1‑149 (MQ=255) tAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATc > 7:83132/1‑149 (MQ=255) cGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCtgt < 5:145253/149‑1 (MQ=255) cGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCtgt < 3:120400/149‑1 (MQ=255) gCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCa > 7:117529/1‑148 (MQ=255) gTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGGCTAAACCCGCTCCTACATGGCCACATATTTCCCTGTa < 1:64585/94‑1 (MQ=255) gTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTa > 2:64585/1‑93 (MQ=255) gAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTa > 7:67997/1‑149 (MQ=255) gTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATc < 8:100418/149‑1 (MQ=255) gcggcAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTATTCGCGGG‑TAAACCCGCGCCTACATGGGCACATATTTACCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGGCGGGTGTACATATCTGTGAGCAAAACTAt > 4:379408/1‑145 (MQ=38) cATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTAGCCGCGAAGAGGCCAAGGCAGGCTGTAGATATCTGGGAGGAAAACTTTCAGATTCATCTCAg > 6:200450/1‑149 (MQ=38) cATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCa < 8:83132/148‑1 (MQ=255) cATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCa < 4:225690/148‑1 (MQ=255) t‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATaaa < 3:306647/148‑1 (MQ=255) ccTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCa < 6:354193/128‑1 (MQ=255) ccTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCa > 5:354193/1‑128 (MQ=255) ccTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCg > 3:307118/1‑149 (MQ=255) ttCAG‑CTGTGCC‑‑CGCCGCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTACCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGAt < 6:181026/147‑1 (MQ=255) cTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCg < 3:379408/149‑1 (MQ=255) ccTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTaa < 4:44601/149‑1 (MQ=255) tctTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAgc > 2:381956/1‑149 (MQ=255) cgcgGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAgcgc < 8:359390/147‑1 (MQ=255) cgcgGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCtt > 4:130243/1‑149 (MQ=255) ggggg‑TAAACCCTCTCCTACATGGCCTCATATTTCCCTGTAGGTGCAGGTTTACACGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTg < 8:161645/147‑1 (MQ=255) tAAACCTGCCCCTACAGGGAAATATGTGGCCATGTAGGAGCGGGGTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAACCTATCAGATGCAGCTCAGCATAAATCGATTTTTCCGCATCTGGTAGCGCTTgatgat > 6:317502/1‑149 (MQ=17) aCCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATcgg < 3:29174/149‑1 (MQ=255) ccGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATcggcg > 4:327284/1‑149 (MQ=255) ccGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATcggcg > 6:53764/1‑149 (MQ=255) gCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGt > 7:211209/1‑149 (MQ=255) | TGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTCTGGGCGGCAATGTCGAAGTAGCGGAAGGCGTTGAGTGGCGGCAGTTTCATGATAT‑CCCTGTTCAG‑CTGTGCC‑‑GGCCTCTTCGCGGG‑TAAACCCGCTCCTACATGGCCACATATTTCCCTGTAGGGGCAGGTTTACCCGCGAAGAGGCCAAGGCAGGCTGTACATATCTGTGAGCAAAACTATCAGATTCATCTCAGCATAAATCGATTTTTCCGCATCTGTAAGCGCTTGATAATCGGCGGT > NC_002947/812157‑812443 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |