| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 906,044 | C→T | 5.1% | P19S (CCA→TCA) | ampD → | N‑acetyl‑anhydromuramyl‑L‑alanine‑amidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 906,044 | 0 | C | T | 5.1% | 240.4 / 2.6 | 78 | P19S (CCA→TCA) | ampD | N‑acetyl‑anhydromuramyl‑L‑alanine‑amidase |
| Reads supporting (aligned to +/- strand): ref base C (36/38); new base T (2/2); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.46e-01 | |||||||||||
ATAGGCCGACGCATTACAATCATTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATT > NC_002947/905898‑906191 | aTAGGCCGACGCATTACAATCATTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCa > 7:307156/1‑149 (MQ=255) gACGCATTACAATCATTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCg > 4:252860/1‑148 (MQ=255) cGCATTACAATCATTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAAc < 4:93989/149‑1 (MQ=255) gCATTACAATCATTCATATGCACACGGCGTTGGCCGCAGGGCATACTGTTGGCATGTTCAAGGCGTTTTTCAGGATCTGCCCATTCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACt < 4:95500/149‑1 (MQ=255) gCATTACAATCATTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACt > 3:73707/1‑149 (MQ=255) cATTACAATCATTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACtt < 3:274348/149‑1 (MQ=255) cATTACAATCATTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACtt < 8:172224/149‑1 (MQ=255) cAATCATTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGTCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATg < 6:76341/149‑1 (MQ=255) cAATCATTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTCGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATg > 5:250734/1‑149 (MQ=255) tCATTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATgcgc < 2:378551/149‑1 (MQ=255) tCATTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATgcgc < 3:294014/149‑1 (MQ=255) aTTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAATGGGGAGTGAGCACAGGGTGTGGTTCCACGGAATCGGAATCACCCACTGCCCATAGCCGAACTTCAATgcgc > 1:319970/1‑149 (MQ=255) aTGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCg > 8:28085/1‑147 (MQ=255) aTGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGaa < 3:68876/149‑1 (MQ=255) cacaCGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTG‑CCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGc < 4:202393/148‑1 (MQ=255) cGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGcc < 3:251033/120‑1 (MQ=255) cGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGcc > 4:251033/1‑120 (MQ=255) gCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATc > 7:290252/1‑148 (MQ=255) ttGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGAtt > 7:24652/1‑149 (MQ=255) gCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTcc < 2:190851/149‑1 (MQ=255) ccGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTccc < 8:71834/149‑1 (MQ=255) cGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCct < 5:106727/149‑1 (MQ=255) gCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CAATGGCTGGTTCCACGGAATCGGAATCACACACTGCCCATCGCCGAACTTCAATGCCCGCCCCGAACCCGAAAAGATTTCCctg > 8:208653/1‑149 (MQ=255) cAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCctgc < 4:73707/149‑1 (MQ=255) gggCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCctgctg < 8:307156/149‑1 (MQ=255) ggCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTgg < 8:214340/149‑1 (MQ=255) aCTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCTCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATc > 3:19645/1‑149 (MQ=255) aCTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCTCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATc > 3:14299/1‑149 (MQ=255) tgtgGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAATGTGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATc > 1:270791/1‑148 (MQ=255) tgtgGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATcaa > 6:155987/1‑147 (MQ=255) tgGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCcac < 8:24652/148‑1 (MQ=255) ggCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCacaa < 8:94327/148‑1 (MQ=255) gCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCacaaca > 2:268075/1‑149 (MQ=255) aTGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATc < 7:124772/149‑1 (MQ=255) tGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCa < 2:270791/149‑1 (MQ=255) gTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CAGTGGATGGTTCCACGGAATCGGAATCACCCAATGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCAACAACATCAg > 1:281944/1‑149 (MQ=255) gTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAg > 7:226121/1‑149 (MQ=255) ttCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTCGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGt < 6:250734/149‑1 (MQ=255) gtCAAGGCGTTTTTCAGGATCTGCCCATTCAAT‑TTGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGt < 2:281944/148‑1 (MQ=255) tCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTc > 3:357836/1‑149 (MQ=255) aCGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCCCTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTg > 8:214470/1‑149 (MQ=255) aCGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCTCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCt < 4:19645/148‑1 (MQ=255) aCGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGa < 6:234262/112‑1 (MQ=255) aCGGAGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCTCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCt < 4:14299/148‑1 (MQ=255) cGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGc < 4:87602/149‑1 (MQ=255) tCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATAACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCt > 1:248746/1‑149 (MQ=255) ccgatctcccATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCGTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGtt < 7:89918/142‑1 (MQ=255) gATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAAc > 3:330598/1‑75 (MQ=255) gATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAAc < 4:330598/75‑1 (MQ=255) gATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGttt < 2:94745/149‑1 (MQ=255) tCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCg > 7:27647/1‑149 (MQ=255) gCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCa > 3:50217/1‑149 (MQ=255) gCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCa > 4:308404/1‑149 (MQ=255) cccATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTc < 7:208653/144‑1 (MQ=255) cccATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCg < 3:353875/145‑1 (MQ=255) ccATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATACACAACATCAGTCTGCCCGCTGCCTGtttagctcg > 8:89918/1‑142 (MQ=255) aaT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAg < 8:226121/149‑1 (MQ=255) aaT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAg > 5:363904/1‑149 (MQ=255) gACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTgca < 3:252860/149‑1 (MQ=255) tATGC‑GACTGGCTGGATCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACATCAATGCGCGCCCCGAAGGCGAATCGATTTCGCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAg < 5:269963/141‑1 (MQ=255) tATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACg > 6:196011/1‑135 (MQ=255) tATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACg < 5:196011/135‑1 (MQ=255) tATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTgaagc > 7:147100/1‑148 (MQ=255) tATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCAGGTGATCCACAACAACAGTCTGCCACCGGCCTGGTTCGGCACGGGCAAg > 6:269963/1‑141 (MQ=255) tGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAAt > 2:356635/1‑149 (MQ=255) tGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAAt < 4:9465/149‑1 (MQ=255) aCTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAAttctt > 4:30710/1‑149 (MQ=255) gctggTTCAACGGAAGCGGAATCACCAACTGCCCATCGCCGAACTTCAATGCGCGCCCCGACGGCGACTAGAGTTACCTGCTGGTGATCCACAACATCAGTCTGCCCACGGCCGGTTTCGGCACGGTCAAGTTGCAGCGAttattcgc > 2:104405/1‑146 (MQ=255) ttCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCg > 7:206464/1‑149 (MQ=255) aCGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCca > 7:161414/1‑82 (MQ=255) aCGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTg > 4:151063/1‑149 (MQ=255) cggaatcggaatCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTgg < 3:308404/149‑1 (MQ=255) ggaatcACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCCCGGGCACGGTGCAGCAATTCTACCAGACCCGCCTGGCCCCtga > 8:84061/1‑149 (MQ=255) gaatcAGCCTCTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCtgat < 7:214470/149‑1 (MQ=255) gaatcACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCtgat < 3:151063/149‑1 (MQ=255) gaatcACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCtgat > 5:363983/1‑149 (MQ=255) cccACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAacac < 8:27647/149‑1 (MQ=255) ccACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACAcc > 5:254960/1‑149 (MQ=255) cccATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTAtt > 7:294437/1‑149 (MQ=255) | ATAGGCCGACGCATTACAATCATTCACATGCACACGGCGTTGGCCGCAGGGCATACTGTGGGCATGTTCACGGCGTTTTTCAGGATCTGCCCATGCAAT‑TGGACTATGC‑CACTGGCTGGTTCCACGGAATCGGAATCACCCACTGCCCATCGCCGAACTTCAATGCGCGCCCCGAAGGCGAATCGATTTCCCTGCTGGTGATCCACAACATCAGTCTGCCCCCGGCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATT > NC_002947/905898‑906191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |