| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 973,304 | T→A | 5.8% | R532R (CGT→CGA) | secD → | protein translocase subunit SecD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 973,304 | 0 | T | A | 5.8% | 271.5 / 4.7 | 86 | R532R (CGT→CGA) | secD | protein translocase subunit SecD |
| Reads supporting (aligned to +/- strand): ref base T (38/43); new base A (2/3); total (40/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
TGGCCACCATCGCCCTGGCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTACCGGCCCGGTC > NC_002947/973159‑973448 | tGGCCACCATCGCCCTGGCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTAtt > 1:261268/1‑149 (MQ=255)tGGCCACCATCGCCCTGGCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTAtt > 4:82209/1‑149 (MQ=255) gCCACCATCGCCCTGGCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTcg > 6:313688/1‑149 (MQ=255) gCCACCATCGCCCTGGCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTc < 5:145317/148‑1 (MQ=255) caccaTCGCCCTGGCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTcgcg < 1:367333/149‑1 (MQ=255) caccaTCGCCCTGGCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTcgc > 1:216719/1‑148 (MQ=255) caccaTCGCCCTGGCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCAGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTcgc > 8:39600/1‑148 (MQ=255) accaTCGCCCTGGCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGa < 8:345199/149‑1 (MQ=255) ccTGGCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTCTTCGCGAATACGCGAGAAGATca < 3:343804/149‑2 (MQ=255) gCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGc < 5:313688/149‑1 (MQ=255) gggCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTg < 2:359380/149‑1 (MQ=255) gggCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTg < 5:219486/149‑1 (MQ=255) gCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGt < 1:183514/149‑1 (MQ=255) aaCATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTAt < 2:191369/149‑1 (MQ=255) tGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCg < 8:172093/149‑1 (MQ=255) tgctgctgcTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTg < 6:152012/149‑1 (MQ=255) ctgctgctgGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTg > 4:67344/1‑147 (MQ=255) tGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAgcgc < 7:175449/140‑1 (MQ=255) tGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAgcgc > 8:175449/1‑140 (MQ=255) gATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCAc > 4:216186/1‑148 (MQ=255) tGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGaa < 3:82209/149‑1 (MQ=255) gTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTCTTCGCGAATACGCGAGAAGATcagc > 4:215316/1‑112 (MQ=38) gTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTCTTCGCGAATACGCGAGAAGATcagc < 3:215316/115‑4 (MQ=38) tCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAgg > 8:40066/1‑149 (MQ=255) gctgctGGGGGCGAGCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAaga > 7:328988/1‑105 (MQ=255) gctgctGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAaga < 8:328988/105‑1 (MQ=255) gctgctGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCt > 3:246497/1‑149 (MQ=255) gctgctGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCt < 4:236520/149‑1 (MQ=255) gctgctGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCt > 6:344835/1‑149 (MQ=255) ctgctgGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCtt < 2:331504/149‑1 (MQ=255) tgctgGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCtt > 3:96150/1‑148 (MQ=255) ctgGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCaa < 5:344835/149‑1 (MQ=255) gggCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATcgc < 3:67344/149‑1 (MQ=255) ggCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATcgcg < 2:179256/149‑1 (MQ=255) gCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCgcgc < 4:305257/149‑1 (MQ=255) gCGACCCTGACCCTGCCGGGTATTGCCAGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCgcgc < 7:39600/149‑1 (MQ=255) cGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGcc < 2:264424/149‑1 (MQ=255) cGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGcc < 7:40066/149‑1 (MQ=255) cctgCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCaa < 3:234241/149‑1 (MQ=255) ggTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGa < 5:486/149‑1 (MQ=255) ggTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGGGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGa < 5:221348/149‑1 (MQ=255) gTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGAc < 2:261268/149‑1 (MQ=255) ttGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGcc > 4:202918/1‑149 (MQ=255) cGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAAtcgtcg < 1:257190/140‑1 (MQ=255) cGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAAtcgtcg > 2:257190/1‑140 (MQ=255) ggCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCt < 3:216186/149‑1 (MQ=255) gCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTACTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCt > 2:255581/1‑148 (MQ=255) aTCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATcgcg < 6:172385/118‑1 (MQ=255) aTCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATcgcg > 5:172385/1‑118 (MQ=255) tCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGac > 4:173514/1‑148 (MQ=255) tgtTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGaccacc < 4:246497/149‑1 (MQ=255) tgtTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGaccacc < 3:332532/149‑1 (MQ=255) tgtTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGaccacc > 5:263954/1‑149 (MQ=255) aCCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTg < 6:186647/67‑1 (MQ=255) aCCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTg > 5:186647/1‑67 (MQ=255) aCCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATcg < 3:293901/107‑1 (MQ=255) aCCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATcg > 4:293901/1‑107 (MQ=255) aCCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGtt < 8:27974/149‑1 (MQ=255) aCCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGtt < 3:173514/149‑1 (MQ=255) ccATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTg < 3:88572/149‑1 (MQ=255) cATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGGGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTgg > 3:48586/1‑149 (MQ=255) aTGGGTATGGCGGTGGACGCCAACGTTCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGt < 1:255581/149‑1 (MQ=255) gggTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTcg > 4:197790/1‑149 (MQ=255) tATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTcggcg > 4:122207/1‑149 (MQ=255) tGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTcggcgg > 7:64555/1‑148 (MQ=255) gACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGtt > 7:85206/1‑149 (MQ=255) cAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCa > 5:83952/1‑149 (MQ=255) aaCGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTGCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCAt < 2:216719/149‑1 (MQ=255) aCGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATg < 7:142884/149‑1 (MQ=255) cGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATgg < 3:202918/149‑1 (MQ=255) tGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATggg > 7:132105/1‑148 (MQ=255) gCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTa > 2:353256/1‑149 (MQ=255) gCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTa > 5:199987/1‑149 (MQ=255) tGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTAcc > 1:165582/1‑149 (MQ=255) tGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTAcc > 3:375312/1‑149 (MQ=255) gATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAAc > 6:152164/1‑103 (MQ=255) gATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAAc < 5:152164/103‑1 (MQ=255) gATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTACCg > 5:254418/1‑149 (MQ=255) aTCTTCTCGCGTATTCGCGAAGAGATCGGGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTAcc < 4:48586/147‑1 (MQ=255) tctcttcGCGAATACGCGAGAAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCt < 4:177297/107‑1 (MQ=255) tctcttcGCGAATACGCGAGAAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCt > 3:177297/6‑112 (MQ=255) ttctCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTACCGGccc > 7:673/1‑149 (MQ=255) ctcGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTACCGGc < 6:263954/145‑1 (MQ=255) tcGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTACCGGCCCGGt > 5:102546/1‑149 (MQ=255) tcGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTACCGGCCCGGt > 3:353271/1‑149 (MQ=255) gcgTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTACCGGCCCGGTc > 3:166624/1‑148 (MQ=255) | TGGCCACCATCGCCCTGGCGGGCAACATGGTGCTGCTGCTGGCGTTGATGTCGCTGCTGGGGGCGACCCTGACCCTGCCGGGTATTGCCGGCATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATTCGCGAAGAGATCGCGGCTGGTATGTCGGTGCAGCGCGCCATCCACGAAGGCTTCAATCGCGCCTACTCGGCAATCGTCGACGCCAACCTGACCACCCTGTTGGTCGGCGGCATCCTGTTTGCCATGGGTACCGGCCCGGTC > NC_002947/973159‑973448 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |