Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,278,484 A→T 5.4% intergenic (‑311/+252) PP_5465 ← / ← PP_1117 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,278,4840AT 5.4% 221.8 / 2.6 74intergenic (‑311/+252)PP_5465/PP_1117hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (33/37);  new base T (2/2);  total (35/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.70e-01

AGATTGCGCTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATGGAATA  >  NC_002947/1278336‑1278632
                                                                                                                                                    |                                                                                                                                                    
aGATTGCGCTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGAGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACaaa                                                                                                                                                      <  3:139417/149‑1 (MQ=255)
      cgcTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTctct                                                                                                                                                >  1:373298/1‑149 (MQ=255)
           tGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATgg                                                                                                                                           <  1:32817/149‑1 (MQ=255)
           tGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATg                                                                                                                                            <  2:58989/148‑1 (MQ=255)
           tGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATg                                                                                                                                            <  2:290942/148‑1 (MQ=255)
           tGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCATAAGAGACTTTGTCTCTTacg                                                                                                                                            <  7:223393/148‑3 (MQ=255)
           atctcTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATgg                                                                                                                                           <  1:228750/145‑1 (MQ=255)
               cTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACTTTGTCTCTTac                                                                                                                                             >  3:269486/1‑142 (MQ=255)
               cTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACTTTGTCTCTTac                                                                                                                                             <  4:269486/143‑2 (MQ=255)
               cTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGt                                                                                                                                       >  5:380901/1‑149 (MQ=255)
               cTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAAACGAAATTCCAGTGGGAGCGTAAGATACAAAGTGTCTTATTGGAGt                                                                                                                                       >  7:284702/1‑149 (MQ=255)
                tACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATgg                                                                                                                                           >  2:228750/1‑144 (MQ=255)
                 aCGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTAt                                                                                                                                             <  1:207586/141‑1 (MQ=255)
                 aCGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTAt                                                                                                                                             >  2:207586/1‑141 (MQ=255)
                 aCGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTgg                                                                                                                                     <  1:155547/149‑1 (MQ=255)
                        aTGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGtt                                                                                                                              <  5:351673/149‑1 (MQ=255)
                         tGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTACAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGATg                                                                                                                             >  1:164475/1‑149 (MQ=255)
                          gAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGt                                                                                                                            >  8:304776/1‑149 (MQ=255)
                             gagcaagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCaa                                                                                                                         <  4:250211/149‑1 (MQ=255)
                               gcaagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGt                                                                                                                       <  5:66761/149‑1 (MQ=255)
                               gcaagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGt                                                                                                                       <  3:343524/149‑1 (MQ=255)
                                caagagcaGAAGCTTGATGTGTGTAAAATTATTTATTATACATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAATACGCAATTACAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGt                                                                                                                       <  5:266126/148‑1 (MQ=255)
                                caagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATg                                                                                                                                            <  2:149424/127‑1 (MQ=255)
                                caagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATg                                                                                                                                            >  1:149424/1‑127 (MQ=255)
                                 aagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGa                                                                                                                     >  8:226088/1‑149 (MQ=255)
                                 aagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGa                                                                                                                     >  6:80993/1‑149 (MQ=255)
                                   gagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGata                                                                                                                   >  3:162865/1‑149 (MQ=255)
                                     gcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGatat                                                                                                                  <  2:373298/148‑1 (MQ=255)
                                      caGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCGTGTTAGTGAAGTGTTGCATGACGGTACGTCAGAAACGGCAATACCAGTGGGAGCGTAAGAGAAAAAGTCTGTTATGGGAGTGGGTTTGTTGTCAAGTGTTATCt                                                                                                                >  8:199106/1‑149 (MQ=255)
                                         aaGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGAt                                                                                                             <  6:176717/149‑1 (MQ=255)
                                           gCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAg                                                                                                           <  5:80993/149‑1 (MQ=255)
                                                  cTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATgg                                                                                                    >  7:26317/1‑149 (MQ=255)
                                                     tgtAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATg                                                                                                     <  6:7496/145‑1 (MQ=255)
                                                     tgtAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTa                                                                                                 >  5:5422/1‑149 (MQ=255)
                                                     tgtAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCAGATGGCt                                                                                                  >  3:343059/1‑148 (MQ=255)
                                                         aaaTTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACAt                                                                                              <  7:230907/148‑1 (MQ=255)
                                                          aattaattATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGGACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGa                                                                                            <  4:39914/149‑1 (MQ=255)
                                                            ttaattaTTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATgg                                                                                                                                           >  2:236876/1‑100 (MQ=255)
                                                            ttaattaTTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATgg                                                                                                                                           <  1:236876/100‑1 (MQ=255)
                                                                   ttatAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACa                                                                                    <  7:226088/148‑1 (MQ=255)
                                                                   ttatAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACAt                                                                                   <  6:83987/149‑1 (MQ=255)
                                                                     ataAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACAtt                                                                                  <  7:92394/148‑1 (MQ=255)
                                                                     ataAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACAnt                                                                                  <  2:199330/148‑1 (MQ=255)
                                                                     ataAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTg                                                                                 >  2:73393/1‑149 (MQ=255)
                                                                              cATCCTGATAGGGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGc                                                                        <  4:33312/149‑1 (MQ=255)
                                                                               aTCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTAc                                                                                                <  2:218230/124‑1 (MQ=255)
                                                                               aTCCTGATAGTGAAGTGTTGCCTGACGGAACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTAc                                                                                                >  1:218230/1‑124 (MQ=255)
                                                                                tCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGt                                                                      <  3:211322/149‑1 (MQ=255)
                                                                                     aTAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGAc                                                                  <  7:304776/148‑1 (MQ=255)
                                                                                        gTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGt                                                               <  7:264362/148‑1 (MQ=255)
                                                                                        gTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGt                                                               <  4:162865/148‑1 (MQ=255)
                                                                                         tGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGc                                                             <  6:380901/149‑1 (MQ=255)
                                                                                          gAAGTGTTGCCTGACGGTACGTCAGAAACGGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGc                                                             <  4:343059/148‑1 (MQ=255)
                                                                                              tgtTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGa                                                        >  5:367918/1‑149 (MQ=255)
                                                                                                  gCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATa                                                      >  8:329925/1‑147 (MQ=255)
                                                                                                     tGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTAAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGtt                                                 >  8:100325/1‑149 (MQ=255)
                                                                                                         ggTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCtgt                                             <  6:5422/149‑1 (MQ=255)
                                                                                                          gTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCtgtg                                            >  8:84809/1‑149 (MQ=255)
                                                                                                           tACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCtgtg                                            >  1:146732/1‑148 (MQ=255)
                                                                                                              gTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAg                                         >  7:43074/1‑148 (MQ=255)
                                                                                                                cAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGaaa                                      >  6:327143/1‑149 (MQ=255)
                                                                                                                 aGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGaaa                                      <  7:100325/148‑1 (MQ=255)
                                                                                                                    aaCCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATcc                                   <  7:199106/148‑1 (MQ=255)
                                                                                                                      ccGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGt                                 >  7:218607/1‑148 (MQ=255)
                                                                                                                      ccGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGt                                 >  7:212939/1‑148 (MQ=255)
                                                                                                                         cAATTCCAGTGTGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATTAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAAt                                     <  5:34561/141‑1 (MQ=255)
                                                                                                                         cAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAAt                                     >  6:34561/1‑141 (MQ=255)
                                                                                                                          aaTTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACtt                            >  2:59367/1‑149 (MQ=255)
                                                                                                                           aTTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTg                           <  2:146732/149‑1 (MQ=255)
                                                                                                                            ttCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTg                           >  3:310673/1‑148 (MQ=255)
                                                                                                                                  tGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAAtgtg                    >  8:92506/1‑149 (MQ=255)
                                                                                                                                     gAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCt                 >  3:17557/1‑149 (MQ=255)
                                                                                                                                         gTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAg             <  4:310673/149‑1 (MQ=255)
                                                                                                                                         atAAGAGACTTTGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAg             >  1:137002/2‑149 (MQ=255)
                                                                                                                                               gaCAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATg       >  5:2689/1‑149 (MQ=255)
                                                                                                                                                   aaGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGTTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATGGaa    >  1:97085/1‑148 (MQ=255)
                                                                                                                                                    aGTCTCTTATGGGAGTGGGTTAGTTGTCAATTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATGGAATa  <  2:164475/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
AGATTGCGCTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATGGAATA  >  NC_002947/1278336‑1278632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑