| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,391,991 | A→G | 5.4% | intergenic (+22/‑93) | aspS → / → PP_1214 | aspartate‑‑tRNA ligase/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,391,991 | 0 | A | G | 5.4% | 283.5 / 3.6 | 94 | intergenic (+22/‑93) | aspS/PP_1214 | aspartate‑‑tRNA ligase/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (46/42); new base G (3/2); total (49/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAGTGATCGCGTTCCCGAAAACCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGAT > NC_002947/1391845‑1392137 | aaGTGATCGCGTTCCCGAAAACCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATg > 1:345964/1‑149 (MQ=255)aaGTGATCGCGTTACCGAAAAACCAGAGCGCTGTATGCGTCATGACCCATGCCGCTGGCATGGTCGACGCCAATGCGCTGCGCGAACTGCACATCCGAATGCGCGAACATACCAAGGTCGAGTAATCAGTCCAA‑GTTCGCATCCACAt < 2:129141/148‑1 (MQ=255) aGTGATCGCGTTCCCGAAAACCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATgg < 5:26542/149‑1 (MQ=255) gTGATCGCGTTCCCGAAAACCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGa < 4:192043/149‑1 (MQ=255) tGATCGCGTTCCCGAAAACCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGAt < 4:203922/149‑1 (MQ=255) gATCGCGTTCCCGAAAACCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATg > 2:7153/1‑149 (MQ=255) ttCCCGATAACCCAGAGCGCTTCCTGCGTCATGACCCAGGCCCCTGGCTTGGTGGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCTCATCCACATGTATGCGCCttt < 4:214044/149‑1 (MQ=255) ttCCCGAAAACCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCATGTGGATGCGcccgg < 5:205153/149‑4 (MQ=255) tCCCGAAAACCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTg > 7:195691/1‑149 (MQ=255) ccGAAAACCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGc < 8:91208/148‑1 (MQ=255) ccGAAAACCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGc < 5:50233/148‑1 (MQ=255) ccGAAAACCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCg > 5:37036/1‑149 (MQ=255) aaaCCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTc > 7:306703/1‑149 (MQ=255) aCCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGa < 8:166842/149‑1 (MQ=255) cccAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGAc < 7:103775/149‑1 (MQ=255) cgcTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCGTTGCGTTTCGACGCAGGtt < 5:221621/149‑1 (MQ=255) cATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGtttttt < 4:24373/148‑1 (MQ=255) cATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTtc < 1:47254/149‑1 (MQ=255) cGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTtcccgt < 3:143077/149‑1 (MQ=255) tCATTACCCAGGCCCCTGGCATGGTCGACCCCAAGGCCCTCCGCGAACTGCACATCCGACTGCGCCAACAGACCAAGCTCGAGTAAGCAGACCCC‑GGGCGCATCCACATGGATTCGCCTTAGCGTTTCCACGAAGGTTTTTtcccgtcc > 8:201498/1‑149 (MQ=255) gACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGcc > 6:129756/1‑149 (MQ=255) gACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGcc > 2:280358/1‑149 (MQ=255) cccAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGcccc > 6:108211/1‑149 (MQ=255) cccAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGcccc > 3:218224/1‑149 (MQ=255) cccAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGcccc > 2:357993/1‑149 (MQ=255) ccAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCg > 2:373116/1‑149 (MQ=255) cAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGt > 8:344551/1‑149 (MQ=255) aGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTc < 5:108211/149‑1 (MQ=255) aGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACAGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACAAGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGt > 7:346324/1‑148 (MQ=255) gCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTtc > 8:222312/1‑132 (MQ=255) gCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTtc < 7:222312/132‑1 (MQ=255) ccTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATggg > 1:2885/1‑149 (MQ=255) cTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCATGACgggg > 1:273101/1‑149 (MQ=255) ggTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGcc > 4:111903/1‑149 (MQ=255) gTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCATGCCggggcgggacg < 8:306703/148‑4 (MQ=255) gTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCATGACggggcgggacgg < 2:273101/149‑5 (MQ=255) gccGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTGTTTTCCCGTCCCGCCCCGTCATGGGGCCGGGCCGttt > 1:262866/3‑149 (MQ=255) gACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGttt > 2:203880/1‑149 (MQ=255) aCGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTtg < 1:280358/149‑1 (MQ=255) aCGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTtg < 1:357993/149‑1 (MQ=255) cAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCATGTGGATGCGcccgg < 4:297564/90‑4 (MQ=39) cAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGtt > 2:190562/1‑95 (MQ=255) cAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGtt < 1:190562/95‑1 (MQ=255) cAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGAt > 2:266149/1‑149 (MQ=255) cccTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCaa‑a < 1:373116/149‑1 (MQ=255) cccTGCGAGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGAAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCga‑a < 5:55041/149‑1 (MQ=255) ccTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑Ag > 6:369610/1‑149 (MQ=255) ccTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑Ag < 7:3272/149‑1 (MQ=255) ccTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑Ag < 8:195691/149‑1 (MQ=255) cTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑Ag > 2:173805/1‑148 (MQ=255) gcgcGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGAt > 5:161141/1‑149 (MQ=255) gcgAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTc < 1:18756/149‑1 (MQ=255) cgAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCg < 8:44227/149‑1 (MQ=255) cacaTCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTGTGTGATTCAA‑AGGATTCG‑GAGTCGt > 6:309411/1‑149 (MQ=255) cacaTCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCACGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGAGTAG‑GAGTCGt > 7:260591/1‑149 (MQ=255) acaTCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGtt > 2:19138/1‑149 (MQ=255) aTCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTtg > 1:74907/1‑124 (MQ=255) aTCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTtg < 2:74907/123‑1 (MQ=255) aTCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTAt < 8:53683/149‑1 (MQ=255) gcgcGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGt > 6:40079/1‑148 (MQ=255) cgcgAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACGTGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGAGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCa > 4:238153/1‑149 (MQ=255) cgcgAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAACAGGATTCG‑GAGTCGTTATGGCTGGTc < 1:203880/149‑1 (MQ=255) cgcgAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGt < 1:173805/147‑1 (MQ=255) cgcgAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGt < 8:158660/147‑1 (MQ=255) cgcgAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCa > 7:174528/1‑149 (MQ=255) gcgAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCCCCTTTGCGTTTCGACCCAGGTTTTTTCCCGTCCCCCCCCGGCATGGGGCGGGGCCGTTGGTGATTCAA‑AGGATGCG‑GCGTCGTAATGGCTGGTCag > 8:69729/1‑148 (MQ=255) cgAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCTTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCaa‑a > 3:41320/1‑121 (MQ=255) gAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCACGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTc > 5:321504/1‑149 (MQ=255) aaCAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTc > 8:95248/1‑148 (MQ=255) aGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAg > 7:196850/1‑149 (MQ=255) gACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGt < 5:369610/149‑1 (MQ=255) ccAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTgg < 1:7153/149‑1 (MQ=255) cAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTggg > 6:315069/1‑149 (MQ=255) cAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTggg > 4:244837/1‑149 (MQ=255) ggTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCg > 5:254691/1‑148 (MQ=255) ggTCGAGTAAGCAGTCCCC‑GGGAGCATCCACATGGATGCGACTTTGCGTTTCGACGCAGGTTTTATCCCGTACCGCCCCGTCAAGGGGCGGGGCCGTTTGTGATTCAA‑AGGTTTCG‑GAGTCGTTATGGCTGGTGATTCCAAGTGGGCg > 5:377278/1‑148 (MQ=255) gTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGaa < 6:254691/149‑1 (MQ=255) aGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATc < 3:229017/149‑1 (MQ=255) gTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCa < 5:129756/149‑1 (MQ=255) aGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGc < 3:111903/149‑1 (MQ=255) gCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCa > 4:319207/1‑149 (MQ=255) gTCCCC‑GGGCGCATCCACTTGGATGCGCCTTTGCGTTGCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCg < 7:201498/149‑1 (MQ=255) cccc‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCGCGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGa < 1:243677/135‑1 (MQ=255) cccc‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGa > 2:243677/1‑134 (MQ=255) gcaaaggCGCATCCATGTGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGc > 6:217081/6‑148 (MQ=255) ccc‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGGCGGTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCa > 1:287480/1‑148 (MQ=255) cc‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCa > 6:287303/1‑147 (MQ=255) c‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAag < 2:2885/149‑1 (MQ=255) gcgaTCCACATGGTTGCGCCTTTGCGTTTCGTCGCAGTTTTTTTCCGGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGGACGGCATAGAgcg < 8:346324/146‑1 (MQ=255) cgcATCCATGTGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAgcg > 6:139428/1‑149 (MQ=255) aTCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAgcgc < 5:189031/147‑1 (MQ=255) aTCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAgcgc > 6:189031/1‑147 (MQ=255) aTCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCa < 7:344551/149‑1 (MQ=255) tCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAg > 3:208343/1‑149 (MQ=255) acaTGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGAt < 6:161141/149‑1 (MQ=255) | AAGTGATCGCGTTCCCGAAAACCCAGAGCGCTGCATGCGTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCC‑GGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAA‑AGGATTCG‑GAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGAT > NC_002947/1391845‑1392137 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |