| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,460,565 | G→A | 6.4% | F300F (TTC→TTT) | algJ ← | alginate O‑acetylase AlgJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,460,565 | 0 | G | A | 6.4% | 187.3 / 2.3 | 62 | F300F (TTC→TTT) | algJ | alginate O‑acetylase AlgJ |
| Reads supporting (aligned to +/- strand): ref base G (25/33); new base A (2/2); total (27/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.97e-01 | |||||||||||
TCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCTGCAGGTTGTCCGGGGCCGGCAGCAGGT > NC_002947/1460419‑1460713 | taggggAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAACGCATCGCATTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAgg > 1:94497/3‑147 (MQ=255) aTTCCCACACCACCACTTGTGGTGCGGCGTTCTTTAAGGCATCGCTTTGCTGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCTTAGTTGGCGACGTCGCTGGGCTGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCa < 5:165671/148‑1 (MQ=255) ccACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGc < 1:194791/148‑1 (MQ=255) ccACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCg > 1:128236/1‑149 (MQ=255) cacaCCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCAAGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCgg > 2:237981/1‑149 (MQ=255) ccaccacTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTg < 5:78067/149‑1 (MQ=255) cacTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCTGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGgctc < 4:326017/149‑3 (MQ=255) cacTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCAGCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGgcgc < 3:363908/149‑1 (MQ=255) ttGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGt < 6:228579/149‑1 (MQ=255) gtggtgCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑a < 2:128236/148‑1 (MQ=255) gcggcgTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGt > 1:76138/1‑149 (MQ=255) gaggcgTTCTTGACGGATTCGCTTTGCATGTACTTGATCATCCGGATCAGCGGGCTATTTCCGTGTTTGGGGTAGTTGGCGACGTCGCTGCGCAGTGCCTGCTGCAG‑CGCTTCAATGAATTTCCAGTGCTGGTTGGCGCTGT‑AGCTgg < 2:94497/146‑1 (MQ=255) cggcgTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTACTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGt < 3:238288/148‑1 (MQ=255) ggcgTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGTCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGc < 8:273955/149‑1 (MQ=255) cTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAGCCGCGCCAAGGAAGTTCCAGTGCGGGTTgg < 1:29258/129‑1 (MQ=255) cTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTgg > 2:29258/1‑128 (MQ=255) gAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCa < 5:101558/146‑1 (MQ=255) gAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAg < 2:296619/147‑1 (MQ=255) gCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTCCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAAc > 5:385376/1‑149 (MQ=255) gCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCAGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAAc > 2:359197/1‑149 (MQ=255) aTCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCg < 7:210477/149‑1 (MQ=255) aTCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCg > 3:211505/1‑149 (MQ=255) aTCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGAAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCg > 4:231223/1‑149 (MQ=255) aTCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGAAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCg > 4:226334/1‑149 (MQ=255) ttGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCt > 1:187816/1‑149 (MQ=255) ttGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCt > 2:324562/1‑149 (MQ=255) cAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGAAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGc < 3:231223/148‑1 (MQ=255) cAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGAAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGc < 3:226334/148‑1 (MQ=255) gTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGAt < 4:30487/141‑1 (MQ=255) gTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGAt > 3:30487/1‑141 (MQ=255) cTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCg < 7:227055/148‑1 (MQ=255) cTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCg < 8:285380/148‑1 (MQ=255) gAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCg > 1:182058/1‑148 (MQ=255) tCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGaaca‑ac < 2:76138/149‑1 (MQ=255) cagcGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGc > 2:99863/1‑149 (MQ=255) cGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑CCGCGTCGCCgg > 8:39910/1‑149 (MQ=255) ccATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑TGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTc > 7:359990/1‑149 (MQ=255) ccATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGt > 2:490/1‑148 (MQ=255) cATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCa < 7:128998/149‑1 (MQ=255) ccGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTc > 5:367209/1‑149 (MQ=255) tCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGc < 5:35619/149‑1 (MQ=255) ttCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAAcc > 6:147449/1‑100 (MQ=255) ttCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAAcc < 5:147449/100‑1 (MQ=255) cGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCgg > 2:10335/1‑100 (MQ=255) cGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCgg < 1:10335/100‑1 (MQ=255) cGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATc < 1:359197/148‑1 (MQ=255) ggCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGa > 3:188741/1‑149 (MQ=255) ttGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGAccggccg < 2:182058/149‑1 (MQ=255) gCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGggt < 2:187816/149‑1 (MQ=255) cGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCg < 4:210262/131‑1 (MQ=255) cGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCg > 3:210262/1‑131 (MQ=255) gACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGggtgg < 4:211505/149‑1 (MQ=255) tGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTc > 3:98134/1‑149 (MQ=255) gcgcAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCt < 1:99863/149‑1 (MQ=255) gcgcAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCt < 1:490/149‑1 (MQ=255) cgcAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCt < 4:188741/148‑1 (MQ=255) aaggCCTGCTGCAT‑CGCGCCCAGGAAGTTCCACTGCCGGGTTGCCCTTT‑ATCCTGTTCCAACCACTTCAAACGGGATATGCCTGTCGGCCAACACACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCTGCa < 1:296803/147‑1 (MQ=255) ggCCTGCTGCAG‑TGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCTGCAGGt < 8:359990/149‑1 (MQ=255) tgctgcAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCTGCAGGTTGTc > 4:196557/1‑149 (MQ=255) gcAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCTGCAGGTTGTCCggg > 1:103340/1‑149 (MQ=255) cAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCTGCAGGTTGTCCgggg > 6:305823/1‑149 (MQ=255) g‑cgcgcCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTGAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGAccggccgg > 1:63677/1‑120 (MQ=255) g‑cgcgcCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGAccggccgg < 2:63677/119‑1 (MQ=255) ggAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCTGCAGGTTGTCCGGGGCCGGCAGCAgg < 3:196557/149‑1 (MQ=255) gAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCTGCAGGTTGTCCGGGGCCGGCAGCAGGt < 1:237981/149‑1 (MQ=255) gAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCTGCAGGTTGTCCGGGGCCGGCAGCAGGt > 2:204462/1‑149 (MQ=255) | TCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCGCAGGGCCTGCTGCAG‑CGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGT‑AGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACA‑ACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTCTGCAGGTTGTCCGGGGCCGGCAGCAGGT > NC_002947/1460419‑1460713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |