| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,503,465 | G→T | 6.3% | E90* (GAG→TAG) ‡ | rplM → | 50S ribosomal protein L13 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,503,465 | 0 | G | T | 6.3% | 251.1 / 6.1 | 79 | E90* (GAG→TAG) ‡ | rplM | 50S ribosomal protein L13 |
| Reads supporting (aligned to +/- strand): ref base G (37/37); new base T (3/2); total (40/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.74e-01 | |||||||||||
AAACCAGAATACACCCCTCACGTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCACCCACACACTGCTCAGCAGCCTCAAG > NC_002947/1503318‑1503612 | aaaCCAGAATACACCCCTCACGTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCga < 7:348902/149‑1 (MQ=255) cAGAATACACCCCTCACGTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑TCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCgaga < 4:254252/147‑1 (MQ=255) cAGAATACACCCCTCACGTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGaaa > 3:254252/1‑148 (MQ=255) cAGAATACACCCCTCACGTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAg > 8:219388/1‑149 (MQ=255) aTACACCCCTCACGTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGa < 4:78332/149‑1 (MQ=255) aTACACCCCTCACGTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGa < 5:209656/149‑1 (MQ=255) cacCCCTCACGTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑c < 8:154392/148‑1 (MQ=255) acCCCTCACGTTGACGCCGGCGACTACATCGTCGTTATCAACGCCGAGGCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑Cg > 1:90476/1‑149 (MQ=255) acCCCTCACGTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGc < 5:319905/149‑1 (MQ=255) cccTCACGTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGcc > 6:30485/1‑148 (MQ=255) ccTCACGTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCaa < 8:304357/149‑1 (MQ=255) gTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGcccc > 2:38648/1‑149 (MQ=255) acCGGCGTCTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCTCGAAGTTGAtttcctt < 1:99068/137‑7 (MQ=255) acCGGCGTCTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCTCGAAGTTGAtttcctt > 2:99068/1‑131 (MQ=255) acCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCg > 3:99908/1‑149 (MQ=255) cGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCgtg > 4:191119/1‑149 (MQ=255) gACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTAt < 6:128561/149‑1 (MQ=255) cTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATc > 8:106604/1‑148 (MQ=255) cATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGATCCGCCAAGGCCCCTGAGCGTGTTATCGa < 1:4341/148‑1 (MQ=255) tcgtTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCGAAGGCCCCTGAGCGTGTTATCGAAACTGCg < 1:29780/149‑1 (MQ=255) gtTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCgg < 5:145476/148‑1 (MQ=255) aaCGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATc < 5:7478/132‑1 (MQ=255) aaCGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATc > 6:7478/1‑132 (MQ=255) aaCGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAgg > 5:283951/1‑149 (MQ=255) aaCGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAg < 4:99908/148‑1 (MQ=255) aCGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTGCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAgg > 8:301680/1‑148 (MQ=255) gCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCAt < 3:214528/149‑1 (MQ=255) aGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCt < 2:90476/149‑1 (MQ=255) ttCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAg < 7:106604/149‑1 (MQ=255) ttCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAg < 3:191119/149‑1 (MQ=255) tCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGCCATGCTGCCTAAg > 6:260125/1‑148 (MQ=255) gACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGc > 1:93909/1‑149 (MQ=255) aCTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGc < 7:183728/148‑1 (MQ=255) cTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTg < 1:38648/149‑1 (MQ=255) cTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTg < 6:112240/149‑1 (MQ=255) tGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTgg > 4:260271/1‑149 (MQ=255) tGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTgg > 1:338813/1‑149 (MQ=255) gTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCgg < 3:239583/117‑1 (MQ=255) gTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCgg > 4:239583/1‑117 (MQ=255) gTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGt > 1:113565/1‑149 (MQ=255) ttCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATg > 5:182519/1‑148 (MQ=255) cGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTAc < 6:283951/148‑1 (MQ=255) gACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGc < 8:36150/130‑1 (MQ=255) aCAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGc < 2:338813/149‑1 (MQ=255) aaaaTGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCaa < 7:219388/149‑1 (MQ=255) ctactCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAg > 3:253130/1‑149 (MQ=255) ctCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTTAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAgt < 5:30485/147‑1 (MQ=255) ctCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTa < 4:63625/77‑1 (MQ=255) ctCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTa > 3:63625/1‑77 (MQ=255) ctCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGc > 5:138756/1‑140 (MQ=255) ctCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGc < 6:138756/140‑1 (MQ=255) tCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTa > 2:374456/1‑149 (MQ=255) tCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTa > 5:48702/1‑149 (MQ=255) ccACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTAcg > 6:329145/1‑149 (MQ=255) ccACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTAcg > 1:39553/1‑149 (MQ=255) ccACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTAcg > 7:255771/1‑149 (MQ=255) cTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCgg < 2:93909/149‑1 (MQ=255) cGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGtg > 2:186358/1‑149 (MQ=255) gTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGtgct > 7:239029/1‑149 (MQ=255) ccAGTCGGTATCAAGTAAATCAACTTCGAGAAGTTTAT‑CGCCAAGGCCCCTGAGAGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAATAACCCTCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCa < 4:253130/149‑1 (MQ=255) ccAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCa < 5:329145/149‑1 (MQ=255) cAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCAc < 3:260271/149‑1 (MQ=255) cAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCAc > 2:357329/1‑149 (MQ=255) cAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACACGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGCTGCTGCTCa > 8:38808/1‑148 (MQ=255) aGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCAcc > 6:109545/1‑149 (MQ=255) ggCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCAccc < 8:255771/149‑1 (MQ=255) ggTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCACCcaca < 2:39553/149‑1 (MQ=255) aaGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGCACCCGCTGCGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCCGGTGCTGCTCACGCAAACACTg > 2:34262/1‑148 (MQ=255) aaGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAgt > 2:105570/1‑119 (MQ=255) ggAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCACCCACACACTGCTc < 5:109545/149‑1 (MQ=255) aaaTCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCACCCACACACTGCTca < 7:301680/148‑1 (MQ=255) gaTCAACTTCTCGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCACCCACACACTGCTcag > 1:293537/2‑148 (MQ=255) aaCTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCACCCACACACTGCTcagca > 2:150497/1‑146 (MQ=255) aaCTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCACCCACACACTGCTcagca < 1:150497/146‑1 (MQ=255) aCTTCTCGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCACCCACACACTGCTcagc < 3:151499/144‑1 (MQ=255) aCTTCTCGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCACCCACACACTGCTcagc > 4:151499/1‑144 (MQ=255) aCTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCa < 2:178760/127‑1 (MQ=255) aCTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCa > 1:178760/1‑127 (MQ=255) ttCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCACCCACACACTGCTCAGCAGCCTc > 8:108249/1‑148 (MQ=255) cGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTAc < 7:197766/109‑1 (MQ=255) cGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTAc > 8:197766/1‑109 (MQ=255) gagaAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCACCCACACACTGCTCAGCAGCCTCAAg > 1:102852/1‑148 (MQ=255) | AAACCAGAATACACCCCTCACGTTGACACCGGCGACTACATCGTCGTTATCAACGCCGA‑GCAGGTTCGTGTGACTGGTGCCAAGTCTTCCGACAAAATGTACTACTCCCACTCCGGTTTCCCAGGCGGTATCAAGGAAATCAACTTCGAGAAGTTGAT‑CGCCAAGGCCCCTGAGCGTGTTATCGAAACTGCGGTCAAAGGCATGCTGCCTAAGAACCCGCTGGGTCGCGACATGTACCGCAAGCTGAAAGTGTACGCGGGTGCTGCTCACCCACACACTGCTCAGCAGCCTCAAG > NC_002947/1503318‑1503612 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |