| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,513,846 | C→T | 5.8% | S5S (AGC→AGT) | rsmH → | ribosomal RNA small subunit methyltransferase H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,513,846 | 0 | C | T | 5.8% | 208.1 / 2.4 | 69 | S5S (AGC→AGT) | rsmH | ribosomal RNA small subunit methyltransferase H |
| Reads supporting (aligned to +/- strand): ref base C (41/24); new base T (2/2); total (43/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.61e-01 | |||||||||||
TGCTGGTGGGGCAACTGAACAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGCTCGGGCCGCAAGGGCGGCTCTTGG > NC_002947/1513705‑1513994 | tGCTGGTGGGGCAACTGAACAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACATTGAAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTc > 7:243794/1‑148 (MQ=255) tggtggGGCAACTGAACAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAAcc < 4:324373/149‑1 (MQ=255) tggtggGGCAACTGAACAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAAc > 6:84726/1‑148 (MQ=255) gtggGGCAACTGAACAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACca < 2:40786/148‑1 (MQ=255) gCAACTGAACAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACcac > 1:287513/1‑144 (MQ=255) gCAACTGAACAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACcac < 2:287513/144‑1 (MQ=255) gCAACTGAACAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTATCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTa > 8:364386/1‑148 (MQ=255) aaCTGAACAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCg > 5:188662/1‑149 (MQ=255) aaCTGAACAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCg < 7:271400/149‑1 (MQ=255) aaaaaaTTACAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGTCGAAATGCACGACGAATTGCGTGAC‑ATCATACTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTg > 8:27164/4‑149 (MQ=255) aaCAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTg > 8:174525/1‑149 (MQ=255) aCAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGTGGCTTCAACCACATTCCCGTCCTGc > 6:20975/1‑149 (MQ=255) aCAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGTGGCTTCAACCACATTACCGTCCTGc > 6:15670/1‑149 (MQ=255) gCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGc > 7:47137/1‑149 (MQ=255) gtcggaggaAGATGCCTGGCACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGt < 8:243794/146‑1 (MQ=255) aTGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAgg > 2:180048/1‑149 (MQ=255) aTGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAgg > 5:164453/1‑149 (MQ=255) aaGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGTGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCAt < 5:20975/149‑1 (MQ=255) aaGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCAt > 6:162984/1‑149 (MQ=255) aGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGTGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCAt < 5:15670/148‑1 (MQ=255) ccTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCt > 7:195026/1‑149 (MQ=255) cTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCtt > 4:81032/1‑149 (MQ=255) cTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCtt < 7:27164/149‑1 (MQ=255) tGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTg > 8:318808/1‑149 (MQ=255) ggAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTgc < 2:136235/149‑1 (MQ=255) aaCGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTgcg‑c > 2:66804/1‑149 (MQ=255) aCGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTgcg‑cg > 4:11105/1‑149 (MQ=255) ggCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTg > 2:264795/1‑149 (MQ=255) ggCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTg > 5:238031/1‑149 (MQ=255) ggCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTg > 3:30002/1‑149 (MQ=255) aGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTa > 4:320342/1‑149 (MQ=255) gCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTAt > 4:95143/1‑149 (MQ=255) cTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGACTCTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGa > 1:91623/1‑149 (MQ=255) cTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGAc > 6:381470/1‑149 (MQ=255) gCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACgg < 2:38483/148‑1 (MQ=255) aGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCAc > 3:42554/1‑149 (MQ=255) tATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACttt > 7:360306/1‑149 (MQ=255) ttCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTc < 1:236568/148‑1 (MQ=255) caacaaCCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCgg < 7:364386/148‑1 (MQ=255) aacaacCGGGCGCCCTGCCCGACGAATTGCGTGAC‑GTGATCCTGTCACCATAGCTAGCGGCTTCAACCCCATTACCGTCCTGCTCGACGCAGCTGTCGAGGCATGGGCCTTGCG‑CGCCGCCGGTTGCGATCTGGACGGCACTTTCGTcc > 5:373992/1‑149 (MQ=255) aacaacCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGcc > 5:348247/1‑149 (MQ=255) caacCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCgg < 3:81032/149‑1 (MQ=255) aacCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCGCCGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCgg < 1:264795/149‑1 (MQ=255) aacCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCggg > 1:321926/1‑149 (MQ=255) aTGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGc < 3:11105/149‑1 (MQ=255) tGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGcc < 8:47137/149‑1 (MQ=255) gCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAg < 3:292005/146‑1 (MQ=255) gCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAg > 4:292005/1‑146 (MQ=255) ccGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTc > 5:80790/1‑149 (MQ=255) ccGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCCGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTc < 1:66804/149‑1 (MQ=255) cgacgaATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCt > 6:197838/1‑149 (MQ=255) gacgaATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGACGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCt > 4:325094/1‑148 (MQ=255) acgaCTTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGa < 4:223586/149‑1 (MQ=255) gaATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATa < 6:188662/149‑1 (MQ=255) gaATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATa < 3:325094/149‑1 (MQ=255) gCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAg > 6:375499/1‑149 (MQ=255) gTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGc < 6:355430/124‑1 (MQ=255) gTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGc > 5:355430/1‑124 (MQ=255) gTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGCGGCGGa > 3:47630/1‑127 (MQ=255) gTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAACCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGa < 4:47630/127‑1 (MQ=255) aC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGc > 6:381504/1‑149 (MQ=255) aTCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGCTCggg < 4:42554/149‑1 (MQ=255) tgtgACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGCTCGGGCCg > 2:305857/1‑148 (MQ=255) aCCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGCTCGGGCCGCAAg < 5:197838/148‑1 (MQ=255) ccATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGCTCGGGCCGCAAggg > 7:39074/1‑149 (MQ=255) ccATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGCTCGGGCCGCAAggg > 1:139582/1‑149 (MQ=255) cATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGCTCGGGCCGCAAGggc > 3:71632/1‑149 (MQ=255) cATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGCTCGGGCCGCAAGggc < 5:381470/149‑1 (MQ=255) agatagCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGCTCGGGCCGCAAGggcggc > 4:310434/1‑149 (MQ=255) cGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGCTCGGGCCGCAAGGGCGGCTCTTgg > 7:246406/1‑149 (MQ=255) cGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGCTCGGGCCGCAAGGGCGGCTCTTgg > 4:183320/1‑149 (MQ=255) | TGCTGGTGGGGCAACTGAACAAATTCCAGCTGTGGGATGAAGATGCCTGGAACGCGGTTTCGGCAGCTGACCTTGCAGCTATTCAACAACCGGGCGCCATGCCCGACGAATTGCGTGAC‑CTGATCCTGTGACCATAGATAGCGGCTTCAACCACATTACCGTCCTGCTCGACGAAGCTGTCGAGGCATTGGCCTTGCG‑CGCCGACGGTTGCTATCTGGACGGCACTTTCGGCCGGGGCGGACACAGCCGTCTGATACTCAGCAAGCTCGGGCCGCAAGGGCGGCTCTTGG > NC_002947/1513705‑1513994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |