| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,586,282 | A→G | 6.1% | intergenic (+18/+2) | PP_1389 → / ← PP_1390 | oxaloacetate decarboxylase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,586,282 | 0 | A | G | 6.1% | 192.6 / 2.4 | 65 | intergenic (+18/+2) | PP_1389/PP_1390 | oxaloacetate decarboxylase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (32/29); new base G (2/2); total (34/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
ACTGCCTGCGGCTGCAGCGTGGTCGGCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCTGCGGCAGCGGTAAGGGCCATGA > NC_002947/1586134‑1586426 | aCTGCCTGCGGCTGCAGCGTGGTCGGCAGAACAAGTATGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGttca < 4:358281/149‑1 (MQ=255) ctgcctgcGGCTGCAGCGTGGTCGGCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGttcat < 3:158690/149‑1 (MQ=255) cctgcGGCTGCAGCGTGGTCGGCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGttcattc > 5:189381/1‑148 (MQ=255) cctgcGGCTGCAGCGTGGTCGGCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGttcattc > 6:296738/1‑148 (MQ=255) cctgcGGCTGCAGCGTGGTCGGCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGttcattc > 2:3953/1‑148 (MQ=255) cctgcGGCTGCAGCGTGGTCGGCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGttcatt < 4:23043/147‑1 (MQ=255) cctgcGGCTGCAGCGTGGTCGGCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGttcatt < 3:164423/147‑1 (MQ=255) cGTGGTCGGCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTCCGTTGAATGAACGgcgccc < 2:237413/149‑3 (MQ=255) gTGGTCGGCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCa < 5:296738/149‑1 (MQ=255) ggCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCTCTGGGCCAAGGAATACATGAGAGTCGAACAGTGATCGGCAGGGCTCCGTTAATACAACGGACGGCTCTAAAG‑Gtag > 4:214822/1‑147 (MQ=255) ggCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTg > 7:162899/1‑149 (MQ=255) tcataaCAAGTCGTAAAACCTCAGTGCCACCGAGCTCTAGCACAACTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTTATCGGCAGGGCTCCGTTCATTCAACGGACGTCGCTCAAG‑GTTGc < 4:259259/145‑1 (MQ=255) gCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTg > 3:259259/1‑148 (MQ=255) cAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCa > 7:276235/1‑149 (MQ=255) cAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCa < 4:293200/149‑1 (MQ=255) gAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACt < 4:328464/149‑1 (MQ=255) cAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACtgtg < 5:101748/149‑1 (MQ=255) ggAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCAc > 5:64298/1‑149 (MQ=255) aCCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTTGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAAt < 7:185980/149‑1 (MQ=255) cTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCAc > 6:342407/1‑142 (MQ=255) cTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCAc < 5:342407/142‑1 (MQ=255) cTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAAtgt > 2:356296/1‑149 (MQ=255) aGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAGTGTTGCACTGTGAGGCACGCAATGTGc < 1:3953/149‑1 (MQ=255) ctctCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTa < 5:108223/149‑1 (MQ=255) tctcGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTAt > 3:160968/1‑149 (MQ=255) gCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGAGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTgg < 3:214822/148‑1 (MQ=255) acacCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACgctgg > 4:377654/1‑149 (MQ=255) acCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACgctgggc > 8:147824/1‑149 (MQ=255) agccagAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGTCGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGggctggc < 8:238305/149‑1 (MQ=255) agccagAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGggctggc > 6:182746/1‑149 (MQ=255) cagAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GGTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGc < 7:216265/149‑1 (MQ=255) agaagaCTACATTGGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCg < 8:276235/149‑1 (MQ=255) gaagaCTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAAtgc < 6:140248/110‑2 (MQ=255) gaagaCTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAAtgc > 5:140248/1‑109 (MQ=255) gaagaCTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGt < 8:162899/149‑1 (MQ=255) agaCTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAg < 3:270743/149‑1 (MQ=255) aCTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCa < 7:147824/149‑1 (MQ=255) cTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCa < 6:64298/148‑1 (MQ=255) tACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGt > 8:337331/1‑149 (MQ=255) tACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGt > 7:161985/1‑149 (MQ=255) tACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGt > 8:232750/1‑149 (MQ=255) aCATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGtt > 2:220715/1‑149 (MQ=255) cATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAacgga > 4:191659/1‑67 (MQ=255) cATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAacgga < 3:191659/67‑1 (MQ=255) aTTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCg < 1:356296/149‑1 (MQ=255) cGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGgc < 5:182746/148‑1 (MQ=255) gCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGgcgc > 1:79295/1‑149 (MQ=255) ccAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCcag > 3:302441/1‑148 (MQ=255) aaGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCcagcag > 2:201588/1‑149 (MQ=255) ggAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGc > 6:339743/1‑149 (MQ=255) gAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCt > 6:265698/1‑149 (MQ=255) aTGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGa < 1:16398/145‑1 (MQ=255) aTGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGa > 2:16398/1‑145 (MQ=255) aTGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGa < 1:22586/145‑1 (MQ=255) aTGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGa > 2:22586/1‑145 (MQ=255) gAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCt > 3:328554/1‑149 (MQ=255) gAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGACTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCt > 1:48452/1‑149 (MQ=255) agagTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCTGc < 4:160968/149‑1 (MQ=255) aTCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGa < 6:113000/128‑1 (MQ=255) aTCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGa > 5:113000/1‑128 (MQ=255) ggCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCTGCGGCAGCgg > 4:302739/1‑148 (MQ=255) gCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCTGCGGCAGCGGt > 7:112520/1‑148 (MQ=255) ttgagcgcCGTCCGTTGAATGAACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCTGCGGCAGCGGt > 8:122241/5‑147 (MQ=255) aGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCa < 5:248905/100‑1 (MQ=255) aGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCa > 6:248905/1‑100 (MQ=255) gggCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCTGCGGCAGCGGTAAgg > 5:1726/1‑149 (MQ=255) ggCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCTGCGGCAGCGGTAAggg < 6:189381/149‑1 (MQ=255) agcgcCGTCCGTTGAATGAACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGt > 2:147759/2‑94 (MQ=38) agcgcCGTCCGTTGAATGAACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGt < 1:147759/93‑1 (MQ=38) ccGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCTGCGGCAGCGGTAAGGGCCAt < 7:337331/149‑1 (MQ=255) ccGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCTGCGGCAGCGGTAAGGGCCAt > 8:291369/1‑149 (MQ=255) gTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCTGCGGCAGCGGTAAGGGCCATGa < 2:79295/149‑1 (MQ=255) | ACTGCCTGCGGCTGCAGCGTGGTCGGCAGAACAAGTCGGAAAACCTCAGTGCCACCGAGCTCTCGCACACCTACACCCAGCCAGAAGACTACATTCGCTGGGCCAAGGAATACATGAGCGTCGAAGAGTGATCGGCAGGGCGCCGTTCATTCAACGGACGGCGCTCAAG‑GTTGCACTGTGAGGCACGCAATGTGCCTGCTCGCAGCTATTGGCGACGCTGGGCTGGCTGCGTAGCAGTTCGGCGCGCCAGCAGGCTGAGCCATACAGCCCTGCGGCAGCGGTAAGGGCCATGA > NC_002947/1586134‑1586426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |