| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,639,585 | A→C | 10.4% | intergenic (‑175/‑136) | czcR‑III ← / → PP_1439 | response regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,639,585 | 0 | A | C | 10.4% | 193.0 / 9.4 | 73 | intergenic (‑175/‑136) | czcR‑III/PP_1439 | response regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (31/34); new base C (5/3); total (36/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.78e-01 | |||||||||||
GATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAACCTGACC > NC_002947/1639438‑1639732 | gATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGaa > 4:169762/1‑149 (MQ=255) aTTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAAc > 3:161401/1‑149 (MQ=255) cTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACggg > 8:274317/1‑149 (MQ=255) gACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACggg < 6:182008/146‑1 (MQ=255) gACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGtt < 7:59216/148‑1 (MQ=255) cccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGTTCCTACAGGCGCGGGTTTAc < 1:108890/149‑1 (MQ=38) cccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCACCTGTAGGAACGGGTTTAc < 8:128090/149‑1 (MQ=255) ccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGTTCCTACAGGCGCGGGtt < 4:314591/145‑1 (MQ=38) ccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGTTCCTACAGGCGCGGGtt > 3:314591/1‑145 (MQ=38) ccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTAcc > 1:27647/1‑149 (MQ=255) ccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTAcc > 3:93274/1‑149 (MQ=255) ccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTAcc > 3:202256/1‑149 (MQ=255) cTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTGATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGTTCCTACAGGCGCGGGTTTActc < 5:227548/149‑3 (MQ=37) gTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGaa < 8:318692/149‑1 (MQ=255) tGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGaa < 6:291327/148‑1 (MQ=255) aCATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAagag > 5:337100/1‑149 (MQ=255) aCATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGGGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAagag < 6:198573/149‑1 (MQ=255) ggTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTGTGGTGTTTTCTGGCTGTCTTTTCGGGCCTC‑TTGGCGAGTAAACCCGCGCCTGTTGGAACGGGTTTACCCGCGAAGAGGCCCGaa > 3:34388/1‑149 (MQ=255) ggTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGaa > 1:334814/1‑149 (MQ=255) aGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGt > 7:198260/1‑148 (MQ=255) aGCCCCCCAATGTAACCCCATCAAAACAGCCCGGCGCCCCACAAACCCCATTTCTAATCCCCCTGTTATCTGGCTGTCTGTGCGGCCCTC‑TTCGCCATAAACCCCCCCCCTGTCGCACCGGGTTTACCCGCTAAGAGCCCCGAACAGTc < 4:161401/149‑1 (MQ=255) ccAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCcccac > 8:117023/1‑148 (MQ=255) aaTGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAg > 7:358659/1‑149 (MQ=255) ttACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCca > 7:276330/1‑149 (MQ=255) cGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCcaca < 3:124903/148‑1 (MQ=255) gAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAg > 6:13607/1‑148 (MQ=255) aaataGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCGTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGa < 3:66669/148‑1 (MQ=255) aaaaaGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGAc > 6:146491/1‑149 (MQ=255) aaaaGGCCTGCGGTGCAGATAACGGATTTGAAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGAGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCACCACAAGGCCACAATGCAGGACt > 8:351474/1‑149 (MQ=38) tGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATccc > 5:166053/1‑149 (MQ=255) tGCGGTGACGATAACGGATTTGTAATTCTGCTTTTTTCTGGCGGTCTGTTCGGGCGTG‑TTGGGGAGTACCCCGGCGCGTGTAGGAACGGGTTTACCGGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATccc < 6:326767/149‑1 (MQ=255) ggtcaataTAACGTATTTTTATTTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTA‑TGCGCGATTAAACCCGCGCCTTTAGCAACGGGTTTACCCGCTAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGc < 6:202324/142‑1 (MQ=255) cAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAACGCCACAATGCAGGACTGTAATCCCCCCCTCa > 2:133871/1‑149 (MQ=255) aTAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCt < 7:274317/149‑1 (MQ=255) tAACGGATTTGTAATTCTGGTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCCCGCCAGTAGGAACCCGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGAATGAAATGCCCGCCTCACCtt > 8:50360/1‑149 (MQ=255) aaCGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGCGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGCAGAGGCCCGAACACTCCACACAACGCCACATTGCAGGACTGTAATGCCCGCCTCACCTTg > 5:48581/1‑149 (MQ=255) aTTTTTAATTCTGCTTTTATGTGGCTGCGTGTGCGGGCCTC‑TTCGCGATTAACCCCGCGCCGGTCGCACCGGTTTAACCCGCTAAGTGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGt < 4:34388/148‑1 (MQ=255) aTTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGtt < 8:276330/149‑1 (MQ=255) ttctAATTCTGCTTTTATCTGGCTGTCTGTTCGGCCCTC‑TTCGCGATAAAACCCGCGCCTGTAGCAACGGGTTTACCCGCTAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTa < 3:205597/145‑1 (MQ=255) aTTCTGCTGTTATCTGGCTGGCTGTGCGGGCCTC‑TTCGCTAGTAAACCCGCGCCTGTAGGAACGGTTTTACCCGCTAAGAGGCCCGAACGGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTagccag < 2:27647/148‑1 (MQ=255) ttCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTagccagcc > 5:153217/1‑149 (MQ=255) gctgTTATCTGGCTGTCTGTTAGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGCACGGGTTTAACCGCGAAGAGGCCCGAACAGTCCACACAAGGCCCCATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCg > 7:307056/1‑149 (MQ=255) tgTTATCTGGCTGTCTGTTCGGGCCTCATACCCGA‑TTAACCCGCCCCAGTTGGAACCGGTTTACCCCCGAAAGAGCCCGAACAGTACCAACCAGGCCACAATGCAGGACAGTAATACCCGCCAGACCATTCCGGTAGCCATcccgccc > 2:106414/1‑144 (MQ=255) ttATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTa < 8:256244/148‑1 (MQ=255) ttATCTGGCTGTCTGTGCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTa < 1:133871/148‑1 (MQ=255) gCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGcc < 8:198260/149‑1 (MQ=255) tgtctgtTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCgt < 6:153217/149‑1 (MQ=255) tgtctgtTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCgt < 4:93274/149‑1 (MQ=255) tgtctgtTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCgt > 8:301369/1‑149 (MQ=255) tctgtTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCgtgt > 2:69257/1‑149 (MQ=255) tctgtTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCgtgt < 2:334814/149‑1 (MQ=255) ttCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTc < 6:166053/146‑1 (MQ=255) cGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGAt < 5:146491/148‑1 (MQ=255) gggCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCg > 8:144021/1‑149 (MQ=255) gCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGt > 7:174136/1‑149 (MQ=255) ctc‑tTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGtta > 8:12254/1‑149 (MQ=255) tc‑tTCGCCGGTAAACCCGTTCCTAAAGCCGCGGGTTTACTCGCGAAGAGGCCCGAACAGACCACACAAGGCCACATTGCAGGACTCTAAAACCAGACACACCTTGCCGTTAGCCAGCACTCGATAGCATGGCCGTGTCTGATCGAtta > 8:85425/1‑148 (MQ=12) cgcgAGTAAACCCGCGCCTGTCGGAACGGGTTTACCGGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACCGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGttatt < 3:169762/146‑1 (MQ=255) cgcgAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTAc > 8:145457/1‑148 (MQ=255) gcgGGTAAACCCGTTCCTACAGGCGCGGGTTTACTCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTAc > 2:119958/1‑147 (MQ=37) gcgAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTAc > 3:129897/1‑147 (MQ=255) ctaGTAAACCCGCGCCTTTAGTAACGGTTTTACCCGCTAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAg < 1:106414/147‑1 (MQ=255) gggTAAACCCGTTCCTACAGGCGCGGGTTTACTCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAgg > 4:330513/3‑149 (MQ=37) tAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCAGATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCaa < 7:50360/149‑1 (MQ=255) cccGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTAc < 6:6198/138‑1 (MQ=255) cccGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTAc > 5:6198/1‑138 (MQ=255) cgcgCCTGTAGCAACGGGTTAACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGa < 4:202256/149‑1 (MQ=255) gcgcCGGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGAt < 8:358659/149‑1 (MQ=255) gcCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATg > 2:63616/1‑148 (MQ=255) gcCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGa < 8:174136/149‑1 (MQ=255) cgttttggAACGGGTTTACCCGGGAAGTGGCCCGAACAGTCCAGACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGGCTGATCGGTTATTACGAGGCAAACACTATGaa < 7:351474/143‑1 (MQ=255) cTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAAc < 5:13607/149‑1 (MQ=255) aGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAACCTGa > 6:162264/1‑149 (MQ=255) gAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCTTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAACCTGAcc < 5:162264/149‑1 (MQ=255) | GATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTC‑TTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAACCTGACC > NC_002947/1639438‑1639732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |