| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,670,629 | G→A | 6.0% | intergenic (+52/‑43) | rplS → / → PP_1466 | 50S ribosomal protein L19/acyl‑CoA thioesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,670,629 | 0 | G | A | 6.0% | 248.2 / 3.5 | 83 | intergenic (+52/‑43) | rplS/PP_1466 | 50S ribosomal protein L19/acyl‑CoA thioesterase |
| Reads supporting (aligned to +/- strand): ref base G (41/37); new base A (2/3); total (43/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.61e-01 | |||||||||||
GCCGTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCAC > NC_002947/1670482‑1670764 | gCCGTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCgg < 3:252522/149‑1 (MQ=255)gCCGTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCgg < 6:144264/149‑1 (MQ=255) ccGTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCggg < 3:8879/149‑1 (MQ=255) gTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTCTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATGAAGGAAAAACTGTGCTGAGTGCAG‑TTTGCCGGGTTGCGGAGGCCGCGTACCGAGAAAAAAGCAGCCTGCGGgct > 8:62307/1‑149 (MQ=255) tGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGgctg > 2:132030/1‑149 (MQ=255) aaaCGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCTCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGgctgct > 6:124696/1‑149 (MQ=255) aaCGTCGTGGTGACGTGCGTAAAGCCAAGCTCTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCCGAAGGCTGCtt < 2:176140/149‑1 (MQ=255) aCGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCttt < 2:195799/149‑1 (MQ=255) cgtcgtGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCtttt < 2:245116/149‑1 (MQ=255) cgtcgtGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCtttt > 1:347422/1‑149 (MQ=255) tcgtGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCg > 1:173594/1‑137 (MQ=255) tcgtGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCg < 2:173594/137‑1 (MQ=255) gtggtgACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCCGAAGGCTGCttttttct < 3:155538/149‑3 (MQ=255) gtgACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGtt > 7:277698/1‑149 (MQ=255) tGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCATCGGGCTGCTTTTTTGCGTTTTGaaa < 6:291201/149‑1 (MQ=255) cGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTTCCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGaaa < 1:116259/148‑1 (MQ=255) gTAAAGCCAAGCTGGACTACCTGCGCGACCTGGCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGACGGCAT‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAACCAGCCTTCGGGCGGCTTTTTTGCGTTTTGAAAccc < 1:372374/149‑1 (MQ=255) aaGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAATGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCg < 6:304921/148‑1 (MQ=255) aGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGa > 6:263791/1‑148 (MQ=255) gCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGaa > 4:366111/1‑148 (MQ=255) cAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTTGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTAGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCCGAAGGCTGCtttttt < 4:292439/128‑1 (MQ=255) cAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTTGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTAGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCCGAAGGCTGCtttttt > 3:292439/1‑128 (MQ=255) cAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAAt > 3:42153/1‑149 (MQ=255) aaGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAAtg > 5:63626/1‑149 (MQ=255) aGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAAtgt < 3:379893/149‑1 (MQ=255) gCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAAtgtg < 5:263791/149‑1 (MQ=255) gTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGAtt > 7:239566/1‑149 (MQ=255) tactacCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTg > 4:373753/1‑149 (MQ=255) tactacCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTg > 5:357564/1‑149 (MQ=255) actacCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGc > 3:248940/1‑149 (MQ=255) tacCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCa > 3:112465/1‑149 (MQ=255) ccTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCAt > 3:109459/1‑148 (MQ=255) ccTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCAt < 4:109459/148‑1 (MQ=255) ccTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTCGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTCGAAACCCCGAAAATGTGATTGCCAt > 3:217040/1‑148 (MQ=255) cTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATga < 8:277698/149‑1 (MQ=255) cgACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGAcc < 1:332627/149‑1 (MQ=255) tGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCgaga > 3:103428/1‑149 (MQ=255) tGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCgaga > 5:34688/1‑149 (MQ=255) gTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGAc > 2:159121/1‑149 (MQ=255) tCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGAc < 5:192961/148‑1 (MQ=255) ggCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAgg < 4:248940/149‑1 (MQ=255) gCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAgg > 7:101596/1‑148 (MQ=255) ccGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCa < 1:132030/149‑1 (MQ=255) aTCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGcgccg < 4:131182/147‑1 (MQ=255) aTCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGcgccg > 3:131182/1‑147 (MQ=255) aTCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGcgcc < 2:347422/146‑1 (MQ=255) aTCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCa < 4:42153/149‑1 (MQ=255) cAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCAcc > 7:271053/1‑149 (MQ=255) aaGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCAcc > 5:364842/1‑148 (MQ=255) aGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCg > 5:26028/1‑148 (MQ=255) ggAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGa > 7:175193/1‑148 (MQ=255) gAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAAc > 3:240402/1‑149 (MQ=255) gAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCAAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGAc > 7:2376/1‑124 (MQ=255) gAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCAAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGAc < 8:2376/124‑1 (MQ=255) aaaCTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGt < 6:357564/149‑1 (MQ=255) aCTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCg < 4:112465/149‑1 (MQ=255) aCTGTCCTGAGTGCAG‑TTTGCCCGGTAGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTCGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCg < 4:217040/149‑1 (MQ=255) cTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCgg < 3:366111/149‑1 (MQ=255) cTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCgg < 6:34688/149‑1 (MQ=255) tCCTGAGTGCAG‑TTTGCTCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGt < 5:124696/147‑1 (MQ=255) tCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGt < 7:255880/147‑1 (MQ=255) tCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGa > 4:364565/1‑149 (MQ=255) tCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGa > 1:168116/1‑149 (MQ=255) cTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGAcc < 3:125819/149‑1 (MQ=255) tGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGAccc > 3:339623/1‑149 (MQ=255) tttGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTAcc > 1:238772/1‑148 (MQ=255) cccGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAgg < 8:271053/148‑1 (MQ=255) cccGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAgg < 3:373753/148‑1 (MQ=255) cccGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGc > 6:263816/1‑149 (MQ=255) ccGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCg > 2:205722/1‑149 (MQ=255) cGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCgg < 8:101596/149‑1 (MQ=255) gCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTc < 2:238772/149‑1 (MQ=255) ccGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTcc > 2:195341/1‑149 (MQ=255) cGAGGCCTCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTccc < 8:175193/149‑1 (MQ=255) ggCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCaa < 6:364842/149‑1 (MQ=255) cgccTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATac > 7:16661/1‑149 (MQ=255) cTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccac < 2:168116/149‑1 (MQ=255) cTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATac < 2:226357/146‑1 (MQ=255) cTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATac > 1:226357/1‑146 (MQ=255) cTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGAGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccac > 2:314379/1‑149 (MQ=255) aaacgcaaaaaaGCAGCCCGAAGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccacc > 7:365857/7‑148 (MQ=255) gCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaa > 1:306637/1‑149 (MQ=255) cGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaac < 7:126117/149‑1 (MQ=255) gaAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaaccac < 1:159121/149‑1 (MQ=255) aaaaaaGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaaccac > 2:99751/1‑148 (MQ=255) aaaaaaGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaaccac > 4:150401/1‑148 (MQ=255) aaaaGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaaccacca > 6:121823/1‑148 (MQ=255) aaaaGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACcaccac < 3:150401/149‑1 (MQ=255) | GCCGTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAG‑TTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCAC > NC_002947/1670482‑1670764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |