| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,695,003 | G→C | 5.9% | E323D (GAG→GAC) | wspC → | biofilm formation methyltransferase WspC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,695,003 | 0 | G | C | 5.9% | 218.2 / 3.2 | 68 | E323D (GAG→GAC) | wspC | biofilm formation methyltransferase WspC |
| Reads supporting (aligned to +/- strand): ref base G (31/33); new base C (2/2); total (33/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 | |||||||||||
CCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTACTGGCTGGGTTTGCTCAGTGATACCGAAGGCGATGCG > NC_002947/1694855‑1695147 | ccGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGTCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAg > 1:254203/1‑149 (MQ=255)ccGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAg > 5:51878/1‑149 (MQ=255)ccGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAg > 4:150524/1‑149 (MQ=255) gCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGtt < 5:366861/149‑1 (MQ=255) cAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑t > 8:333559/1‑149 (MQ=255) aaaCTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑Tg > 6:363093/1‑149 (MQ=255) aaaCTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑Tg < 3:63808/149‑1 (MQ=255) aCTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGc > 2:324064/1‑149 (MQ=255) ccAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGTCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑Cg < 2:254203/147‑1 (MQ=255) ccAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑Cgg > 1:79501/1‑148 (MQ=255) ccAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGc < 6:112911/149‑1 (MQ=255) ccAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCAACTCGC‑TGGc‑ccc < 2:178924/148‑3 (MQ=255) cAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCa < 1:66345/149‑1 (MQ=255) aGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCAtt < 7:333559/149‑1 (MQ=255) cgtTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCg < 4:85563/148‑1 (MQ=255) gtTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGc > 6:42110/1‑149 (MQ=255) acgacgTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTgg < 4:276447/148‑1 (MQ=255) acgacgTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGc > 3:292017/1‑149 (MQ=255) cgacgTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGc > 1:57124/1‑148 (MQ=255) gacgTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGcc > 1:376790/1‑148 (MQ=255) ttGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCGGTTGCCTCGTTCTCGTCGTGTGCTGCCGGTGGCTGCCAGGCCAGCGCGAGACCGCGAGCA‑CAGCCACGTGGGGGACAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGc < 2:250129/149‑1 (MQ=255) cccGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGGCCAGCCGGGCAATGCCg < 8:136359/148‑1 (MQ=255) cccGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCg < 3:198722/148‑1 (MQ=255) cccGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCCGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CCGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCCCCTGGCCAATGCCgg > 4:21079/1‑149 (MQ=255) cACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGc > 7:287867/1‑148 (MQ=255) cGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGc < 8:131187/149‑1 (MQ=255) gTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGc > 7:185898/1‑147 (MQ=255) gTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGa < 6:341404/149‑1 (MQ=255) aTCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAg > 5:78927/1‑149 (MQ=255) cccAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCAGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAATAGCAACCCCCCGGGGGGCCGCGAGTTTG‑GGGC‑CCGCATTTCCCGGGTGGCCAATTCCCGTGGCCGCGCGCCGGCCCg > 1:314946/1‑147 (MQ=255) ccAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGc > 5:321971/1‑149 (MQ=255) tgtgCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAAt < 2:57124/149‑1 (MQ=255) cGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCaa > 6:127345/1‑149 (MQ=255) gCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGc > 4:204461/1‑148 (MQ=255) cTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTAc > 8:235242/1‑149 (MQ=255) ttCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGa < 5:110853/149‑1 (MQ=255) ttCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGa < 2:376790/149‑1 (MQ=255) gcggcgTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGc < 5:141198/148‑1 (MQ=255) gcggcgGGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGc < 3:288498/148‑1 (MQ=255) cggcgTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCa < 6:51878/149‑1 (MQ=255) gtgCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTAccc < 6:321971/149‑1 (MQ=255) ccGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTc > 5:21321/1‑149 (MQ=255) ccGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTc > 6:2227/1‑149 (MQ=255) cGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCg < 4:380992/149‑1 (MQ=255) tGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGca < 4:292017/149‑1 (MQ=255) gcggcCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGcac < 6:201354/148‑1 (MQ=255) gcggcCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGcac > 5:201354/1‑148 (MQ=255) ggccaggccaGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAgg > 6:57519/1‑149 (MQ=255) gccaggccagCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGgt < 5:42110/149‑1 (MQ=255) caggccagCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGgtgt < 5:127345/149‑1 (MQ=255) aggccagCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGCGCGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGgtg > 1:295508/1‑148 (MQ=255) gccagCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGtac > 4:45076/1‑148 (MQ=255) gccagCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGtac > 7:216074/1‑148 (MQ=255) gcgcGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTActg > 6:192088/1‑149 (MQ=255) gcgcGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTActg < 7:214397/149‑1 (MQ=255) cgcgAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTActgg < 5:192088/149‑1 (MQ=255) gAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTActggctg < 8:194870/149‑1 (MQ=255) gAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTActggctg > 6:298503/1‑149 (MQ=255) ccGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGCGTGCC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATCCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTACTGGCTGGGt > 1:253861/1‑149 (MQ=255) ca‑caGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCATCGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTACTGGCTGGGTTTGCTc < 7:266432/147‑1 (MQ=255) ca‑caGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCACCGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTACTGGCTGGGTTTGCTc > 8:266432/1‑147 (MQ=255) a‑caGCCTCGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATGGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTACTGGCTGGGTTTGCTCAGt < 8:266283/149‑1 (MQ=255) a‑caGCCACGAGGGGGCCAGCGAGTTGG‑TGGC‑CGGCATTGCGCGGCTGGCCAATGCCGGTGCCAGGGAGCAGGCCGGTAGCGAATGCCAACGCTACCTGAGCGAGTACCCGCCGTCGGGACAGGTGTACTACTGGCTGGGTTTGCTCatt < 3:21079/149‑3 (MQ=255) caatgccggCCAGCAACTCGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTACTGGCTGGGTTTGCTCAGTGATAcc > 6:380959/8‑149 (MQ=255) gCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTACTGGCTGGGTTTGCTCAGTGATACCGAAGGCGa < 5:363093/149‑1 (MQ=255) gCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTACTGGCTGGGTTTGCTCAGTGATACCGAAGGCGa > 7:42465/1‑149 (MQ=255) ccAGCAACTCGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGgt > 2:164901/1‑109 (MQ=255) ccAGCAACTCGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGgt < 1:164901/109‑1 (MQ=255) aGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTACTGGCTGGGTTTGCTCAGTGATACCGAAGGCGATgc > 8:61115/1‑149 (MQ=255) gCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTACTGGCTGGGTTTGCTCAGTGATACCGAAGGCGATgcg < 5:2227/149‑1 (MQ=255) gCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTACTGGCTGGGTTTGCTCAGTGATACCGAAGGCGATgcg > 2:123264/1‑149 (MQ=255) | CCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCA‑CAGCCACGAGGGGGCCAGCGAGTTGC‑TGGC‑CGGCATTGCCCGGCTGGCCAATGCCGGTGCCAGCGAGCAGGCCCGTAGCGAATGCCAACGCTACCTGAGCCAGTACCCGCCGTCGGCACAGGTGTACTACTGGCTGGGTTTGCTCAGTGATACCGAAGGCGATGCG > NC_002947/1694855‑1695147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |