Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,704,637	T→A	11.6%	M1* (TTG→TAG) †‡	PP_1499 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,704,637	0	T	A	11.6%	145.9 / 6.5	59	M1* (TTG→TAG) †‡	PP_1499	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (23/29);  new base A (5/2);  total (28/31)
Fisher's exact test for biased strand distribution p-value = 2.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.00e-01

GAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGG  >  NC_002947/1704491‑1704776                                                                                                                                                    |                                                                                                                                            gaggaCAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGc                                                                                                                                           <  1:216707/149‑1 (MQ=255)         cggcgacggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCcgc                                                                                                                                       <  1:163340/145‑1 (MQ=255)         cggcgacggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCcgc                                                                                                                                       >  2:163340/1‑145 (MQ=255)          ggcgacggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAaga                                                                                                                                  <  5:152095/149‑1 (MQ=255)            cgacggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCCTCTTCGCGGGC‑AAGCCCGCGAagacg                                                                                                                                <  6:287328/149‑3 (MQ=255)            cgacggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCGACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGGGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAgg                                                                                                                                <  5:373877/149‑1 (MQ=255)              acggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGcc                                                                                                                              <  6:102171/149‑1 (MQ=255)                    tGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACa                                                                                                                        <  5:821/149‑1 (MQ=255)                          tCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGAGCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTc                                                                                                                  <  5:165515/149‑1 (MQ=255)                            gACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGGGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCgt                                                                                                                <  2:123656/149‑1 (MQ=255)                            gACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCgt                                                                                                                >  5:269629/1‑149 (MQ=255)                                 cccGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCg                                                                                                                 >  8:188591/1‑143 (MQ=255)                                 cccGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCg                                                                                                                 <  7:188591/143‑1 (MQ=255)                                 cccAGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTAc                                                                                                            >  2:163996/1‑148 (MQ=255)                                  ccGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTa                                                                                                          >  3:86691/1‑149 (MQ=255)                                   cggcggCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTAc                                                                                                            >  6:376476/1‑146 (MQ=255)                                   cggcggCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTAc                                                                                                            >  3:306231/1‑146 (MQ=255)                                      cggcggGGTTGCTGGACTACCTGGACGACCCGGCCAAGTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGGGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGaaa                                                                                                      <  8:104262/149‑1 (MQ=255)                                         cgcgGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGa                                                                                                   <  5:376476/149‑1 (MQ=255)                                          gcgGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAg                                                                                                  <  4:306231/149‑1 (MQ=255)                                                 cTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCg                                                                                            <  2:274498/148‑1 (MQ=255)                                                    ggcTACCTGGACGACCGGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGGGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTg                                                                                         <  1:251441/146‑1 (MQ=255)                                                    gCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTTTAATAGAAATGAGTTACCGGttg                                                                                        >  6:227267/1‑147 (MQ=255)                                                     ccTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGa                                                                                       <  5:227267/149‑1 (MQ=255)                                                      cTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGAc                                                                                      <  2:44149/149‑1 (MQ=255)                                                      cTACCTGGACGACCCGGCCAACTCCGACCTGGTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGAc                                                                                      <  6:389151/149‑1 (MQ=255)                                                        aCCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGACGCCGGGACAGGTTTCGTGTTCTAGAAAGGAGTTCCCGGTGGACg                                                                                     >  2:158552/1‑148 (MQ=255)                                                                      gCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCTGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCa                                                                      <  3:239323/149‑1 (MQ=255)                                                                                aCCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCt                                                            <  4:86691/149‑1 (MQ=255)                                                                                  cTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGt                                                          >  5:269002/1‑149 (MQ=255)                                                                                       cgtcgAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGAc                                                     >  3:185287/1‑149 (MQ=255)                                                                                         tcgAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCg                                                   >  5:158564/1‑149 (MQ=255)                                                                                           gAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGc                                                  <  1:163996/148‑1 (MQ=255)                                                                                                   gcgGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTTCTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTcgcg                                         <  1:336974/149‑1 (MQ=255)                                                                                                   gcgGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCTAACCATCCGCGCCCTGTCCGACCGCATAGTcgcg                                         >  7:144157/1‑149 (MQ=255)                                                                                                   gcgGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTcgcg                                         <  8:48100/149‑1 (MQ=255)                                                                                                   gcgGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑GTGCCCGCGCAGAGGGCGGGACAGGGTTCGGGGTCTAGAAATGAGTTGCCGGGGGACGCATAACCGCAAACCATCCGCGCCCTGTCCGACCCCCTCGGcgcg                                         >  2:331176/1‑149 (MQ=255)                                                                                                      gTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGca                                      <  6:269629/149‑1 (MQ=255)                                                                                                       ttCCAGCGCTCGTGCAAATGACCGTGTTGTCCTCTTCGCGGGG‑TTGCCCGCGAAGAGGCCGGTAGAGGTTTCGTGTACTAGAATGGAGTTCCCGGTGGACGAATCCCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGcac                                     <  4:245765/149‑1 (MQ=255)                                                                                                       ttCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGcac                                     <  6:158564/149‑1 (MQ=255)                                                                                                       ttCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGca                                      >  2:275953/1‑148 (MQ=255)                                                                                                        tCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCGTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGca                                      >  1:74618/1‑148 (MQ=255)                                                                                                           aGCGCTAGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGCGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTAACGGTGGAAGAATACCAGCAAACCATCAGCGCCCAGTCAGACAGCATCGTCGAGGCACAGaa                                 >  7:64852/1‑148 (MQ=255)                                                                                                              gcTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGcc                              <  6:269002/149‑1 (MQ=255)                                                                                                                  gggCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGa                            <  1:158552/147‑1 (MQ=255)                                                                                                                  gggCAAATGACCGTGTTGGCGTATTAGAGGGC‑TTGCCGGCGAAGAGGCCGGTACAGGTTGCGTGGACTAGAAAGGAGTTCACGGTGGACGGAGTCCCTCAAACCATACGGGCACTGTCCGACCGCATCGGCGCGGCACAGACGCCGATc                          >  6:281666/1‑149 (MQ=255)                                                                                                                        aTGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCgg                       <  3:165903/146‑1 (MQ=255)                                                                                                                        aTGACCGTGTTGGCGTCTTAGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTGGTGTACTAGAAAGGAGTTACCGGTGGAAGAATAACAGCAAACCATACGCGCCCTGTCCCACCGCAACGTCGCGGCACAGACGCCCATCCgg                       >  4:165903/1‑146 (MQ=255)                                                                                                                                   ggCCTCTTCGCGGGC‑AAGCCCGCGAAGACGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGcaca                                    >  1:100209/1‑122 (MQ=255)                                                                                                                                   ggCCTCTTCGCGGGC‑AAGCCCGCGAAGACGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGt         >  5:368984/1‑149 (MQ=255)                                                                                                                                    gCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGAc                                                     >  7:42784/1‑104 (MQ=255)                                                                                                                                    gCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGAc                                                     <  8:42784/104‑1 (MQ=255)                                                                                                                                     cGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGCCGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTg        >  1:163730/1‑148 (MQ=255)                                                                                                                                      gTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTg        >  6:218705/1‑147 (MQ=255)                                                                                                                                      gTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTg        >  5:27738/1‑147 (MQ=255)                                                                                                                                       tCTTCGCGGGC‑AAGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAg     >  2:245613/1‑149 (MQ=255)                                                                                                                                         ttCGCGGGC‑AAGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTg   >  1:211509/1‑149 (MQ=255)                                                                                                                                         ttCGCGGGC‑AAGCCCGCGAAGACGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCACGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTg   >  2:127711/1‑149 (MQ=255)                                                                                                                                           cgcgGGC‑AAGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg  <  1:245613/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                            GAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGG  >  NC_002947/1704491‑1704776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑