| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,836,740 | T→A | 5.6% | F63Y (TTC→TAC) | ttcA → | tRNA 2‑thiocytidine(32) synthetase TtcA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,836,740 | 0 | T | A | 5.6% | 252.1 / 2.4 | 83 | F63Y (TTC→TAC) | ttcA | tRNA 2‑thiocytidine(32) synthetase TtcA |
| Reads supporting (aligned to +/- strand): ref base T (41/37); new base A (3/2); total (44/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCGGTGGTAAAGGAGCTGGTACCCG > NC_002947/1836593‑1836880 | gCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTc < 2:132271/149‑1 (MQ=255) ccTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCg < 1:136918/149‑1 (MQ=255) tctcGCTGGCGAAGCCATCACCGACTACAACATGTTCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCTCGAACGTGATCggt > 1:57724/1‑146 (MQ=255) tctcGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCTCGAACGTGATCggt > 3:27971/1‑146 (MQ=255) tctcGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCTCGAACGTGATCggt < 4:27971/148‑3 (MQ=255) tctcGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCTCGAACGTGATCggt < 2:57724/148‑3 (MQ=255) tGGCGAAGCCATCACCGACTACAACATGTTCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATc > 1:218478/1‑139 (MQ=255) tGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATc < 2:218478/139‑1 (MQ=255) cGAAGCCATCACCGACTACAACATGATCGACGATGGCTACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTCCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACa < 6:49120/149‑1 (MQ=255) gAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGt‑‑t < 7:12560/138‑1 (MQ=255) gAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGt‑‑t > 8:12560/1‑138 (MQ=255) ccATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGAc < 1:98637/149‑1 (MQ=255) ccATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGAc > 2:98637/1‑149 (MQ=255) aTCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGAc > 5:63774/1‑147 (MQ=255) aTCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTACGAGATCGT‑‑TGAGGTGAACATGGAc > 5:100410/1‑147 (MQ=255) tCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAg < 1:26656/149‑1 (MQ=255) cGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGaaa > 3:1675/1‑148 (MQ=255) acaacaTGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCg < 5:107747/125‑1 (MQ=255) acaacaTGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCg > 6:107747/1‑125 (MQ=255) caacaTGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTAGACCATGCTAGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTAGACATCGT‑‑TGCGGTGAACAAGGACCAGAAACAGCCgg > 5:297351/1‑149 (MQ=255) caacaTGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCgg > 5:13257/1‑149 (MQ=255) tCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCt > 8:265576/1‑149 (MQ=255) gCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTa > 2:346313/1‑149 (MQ=255) gACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACt > 4:307250/1‑149 (MQ=255) ggTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCgg > 4:63023/1‑149 (MQ=255) gTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCTGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGc < 2:197687/149‑1 (MQ=255) tCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACg > 5:168743/1‑138 (MQ=255) tCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACg < 6:168743/138‑1 (MQ=255) tCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGcc > 7:230746/1‑149 (MQ=255) cATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGcc > 6:275305/1‑148 (MQ=255) aTGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTa > 7:106490/1‑149 (MQ=255) tGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTAc < 1:346313/149‑1 (MQ=255) tGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTAc > 4:187209/1‑149 (MQ=255) tGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTAc > 3:133134/1‑149 (MQ=255) ggTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTAcc > 3:103245/1‑149 (MQ=255) tGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTc > 6:363683/1‑147 (MQ=255) ccTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAg > 5:19684/1‑148 (MQ=255) ccTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAg < 4:1675/148‑1 (MQ=255) ccTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAg < 7:101554/148‑1 (MQ=255) gTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGc > 5:161824/1‑149 (MQ=255) cggcggCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTgg < 3:307250/149‑1 (MQ=255) cggcggCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTg < 3:311248/148‑1 (MQ=255) cggcggCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTg < 8:106490/148‑1 (MQ=255) cAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTc > 2:1051/1‑148 (MQ=255) ggACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAg > 4:146859/1‑148 (MQ=255) aCAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTAc > 4:355390/1‑149 (MQ=255) aCAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTAc > 2:126696/1‑149 (MQ=255) cAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTAcc < 6:13257/149‑1 (MQ=255) aGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAg < 8:129860/105‑1 (MQ=255) aGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAg > 7:129860/1‑105 (MQ=255) cTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGTGCGGCGGTGAAAATGGACCAGAAACAGCCGGGATACACTGAGCACGTACTGCCGGCCTCCCTCAAGGAGCTGGGGATCCAGTAcc > 1:310569/1‑148 (MQ=255) acCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACAtcgt > 3:219752/1‑149 (MQ=255) acCATGCTAGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACAtcgt > 3:238674/1‑149 (MQ=255) ccATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACAtcgtc < 6:19684/149‑1 (MQ=255) cATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTgggg > 1:36661/1‑130 (MQ=255) cATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTgggg < 2:36661/130‑1 (MQ=255) cATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACAtcgtc > 3:64374/1‑148 (MQ=255) cTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGaa < 3:272089/149‑1 (MQ=255) tCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTAc < 7:91446/110‑1 (MQ=255) tCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTAc > 8:91446/1‑110 (MQ=255) tCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAg > 4:181945/1‑149 (MQ=255) cGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAgg < 5:363683/149‑1 (MQ=255) cGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAg > 3:245033/1‑148 (MQ=255) aCGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCATGTCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGAt < 5:275305/149‑1 (MQ=255) cGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATa < 7:265576/149‑1 (MQ=255) gTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATAc < 1:1051/149‑1 (MQ=255) gTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACt > 1:98607/1‑149 (MQ=255) gTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACt > 2:322272/1‑149 (MQ=255) aCCTTCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAACCAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCggt < 2:310569/148‑1 (MQ=255) aCCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCggtg < 4:245033/149‑1 (MQ=255) ccTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCggtgg < 6:63774/149‑1 (MQ=255) ccTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCggtgg > 2:193197/1‑149 (MQ=255) cTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCAGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCggtgg > 7:256407/1‑148 (MQ=255) cAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCGGTGGTaaa < 4:64374/149‑1 (MQ=255) gAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCGGTGGTAAAgg < 3:146859/149‑1 (MQ=255) ggTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCGGTGGTAAAGGAGc < 3:355390/149‑1 (MQ=255) gTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCGGTGGTAAAGGAGCt > 6:331858/1‑149 (MQ=255) gTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCGGTGGTAAAGGAGCt < 3:63023/149‑1 (MQ=255) gCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATTCCTACTCGGTGGTAAAGGAGCTgg < 4:133134/148‑1 (MQ=255) gCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCGGTGGTAAAGGAGCTgg < 4:219752/148‑1 (MQ=255) gATGACGTTCGAGATCGC‑‑TGCGGCGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCCAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCGGTGGTAAAGGAGCTGGTACCCg < 6:100410/149‑1 (MQ=255) gTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACcac > 7:300889/1‑97 (MQ=255) gTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACcac < 8:300889/97‑1 (MQ=255) | GCCTGCGTCGTCTCGCTGGCGAAGCCATCACCGACTACAACATGATCGAGGATGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTCGACGTTCTGTTGCACCTGCAGAAGGTGGCACCGATCACGTTCGAGATCGT‑‑TGCGGTGAACATGGACCAGAAACAGCCGGGCTTCCCTGAGCACGTACTGCCGGCCTACCTCAAGGAGCTGGGGGTCGAGTACCACATCGTCGAGAAGGATACCTACTCGGTGGTAAAGGAGCTGGTACCCG > NC_002947/1836593‑1836880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |