| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,892,528 | G→A | 7.8% | intergenic (+38/‑57) | PP_1697 → / → PP_1698 | transcriptional regulator, GntR family/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,892,528 | 0 | G | A | 7.8% | 225.8 / 6.2 | 77 | intergenic (+38/‑57) | PP_1697/PP_1698 | transcriptional regulator, GntR family/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base G (31/40); new base A (3/3); total (34/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.27e-01 | |||||||||||
CCGGTGGTCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGAAGTG > NC_002947/1892380‑1892674 | ccGGTGGTCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGtgctg > 7:43196/1‑149 (MQ=255) ggtggtCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGcc < 5:295057/149‑1 (MQ=255) tggtCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCAc > 6:241738/1‑149 (MQ=255) tCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGgc > 6:198109/1‑149 (MQ=255) gTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGGCAGCACGgcgc < 2:112396/149‑1 (MQ=255) gTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGgcg > 5:40496/1‑148 (MQ=255) tGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGGCAGCACGGCGCa < 5:249969/149‑1 (MQ=255) tGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGATTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGgcg > 8:84300/1‑147 (MQ=255) gATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGGCAGCACGgcgc > 1:33653/1‑147 (MQ=255) gATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGGCAGCACGgcgc < 2:33653/147‑1 (MQ=255) tCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACTGCGCAGTg < 2:204668/149‑1 (MQ=255) cgcCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTc < 2:305226/149‑1 (MQ=255) ccTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGc > 5:64011/1‑149 (MQ=255) ccGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGccc < 7:202401/149‑1 (MQ=255) aCGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCacac < 3:201405/148‑1 (MQ=255) aCGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACAcc > 5:232248/1‑149 (MQ=255) cGCCGGCAAACCTCTGGAATGGCGCCTCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACAcc < 1:145881/148‑1 (MQ=255) gCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCa > 4:173511/1‑149 (MQ=255) gCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTCCCCGTCACACCCa > 4:250607/1‑149 (MQ=255) ccGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCAc < 7:178411/149‑1 (MQ=255) ggCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGa < 6:232248/149‑1 (MQ=255) ggCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGa < 5:57203/149‑1 (MQ=255) aaaCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACAcc > 1:71363/1‑141 (MQ=255) aaaCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACAcc < 2:71363/141‑1 (MQ=255) aaCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGAc > 4:145071/1‑146 (MQ=255) aCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAg > 1:103903/1‑148 (MQ=255) ccTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAg > 3:177139/1‑147 (MQ=255) ccTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCACATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGaa < 7:173649/149‑1 (MQ=255) tctGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAg > 2:233731/1‑148 (MQ=255) ctGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGa > 3:236511/1‑149 (MQ=255) tGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCTCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGAAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAgg < 7:169217/147‑1 (MQ=255) tGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAgg < 7:164237/147‑1 (MQ=255) tGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAgg < 3:60601/147‑1 (MQ=255) gAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGAt < 5:198109/147‑1 (MQ=255) gAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGAt < 4:236511/147‑1 (MQ=255) gAATGGCGCCGCGCGCGCGGCCATGCGCAGCACTACCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTCCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATaa < 8:136606/149‑1 (MQ=255) aaTGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAAc < 8:346018/149‑1 (MQ=255) ggCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACGGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACaa > 1:112864/1‑148 (MQ=255) gcgcCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATc < 6:40496/149‑1 (MQ=255) gcgcCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATc < 3:244974/149‑1 (MQ=255) cgccgcTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCa > 6:36010/1‑149 (MQ=255) cgcgGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCt < 6:64011/149‑1 (MQ=255) ggCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGt < 1:12007/149‑1 (MQ=255) cgcAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATcgcg < 5:241738/148‑1 (MQ=255) cgcAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCga < 3:145071/149‑1 (MQ=255) gcagcaCTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGt < 8:246445/141‑1 (MQ=255) gcagcaCTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATcgc > 8:252751/1‑146 (MQ=255) gcagcaCTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGAGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGt > 7:246445/1‑141 (MQ=255) agcaCTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGAt < 1:371802/149‑1 (MQ=255) tCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCt > 7:307326/1‑148 (MQ=255) gCTACTGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATcgc > 4:326958/1‑135 (MQ=255) gCTACTGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATcgc < 3:326958/135‑1 (MQ=255) cTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACgg < 7:252751/149‑1 (MQ=255) cGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAAc < 3:250607/149‑1 (MQ=255) gCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACg < 3:173511/149‑1 (MQ=255) gTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTg < 1:15768/149‑1 (MQ=255) cGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATcgcg < 1:338516/111‑1 (MQ=255) cGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATcgcg > 2:338516/1‑111 (MQ=255) cGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGt > 7:357573/1‑149 (MQ=255) ttcacccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTcggcg > 5:23730/1‑149 (MQ=255) ttcacccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTcggag > 7:65129/1‑147 (MQ=255) ttcacccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCATCGCCTGCCCGTAACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGATATCACCTCACGGGAACGCAAGACATTCAGGCCCTGTTTcggcg > 4:146000/1‑149 (MQ=255) cacccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTcggcgg < 5:164837/148‑1 (MQ=255) cacccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTcggcgg < 3:307720/148‑1 (MQ=255) ccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTgg > 5:26831/1‑149 (MQ=255) caccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTc < 2:103903/147‑1 (MQ=255) accTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTgg > 5:9128/1‑126 (MQ=255) accTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTgg < 6:9128/126‑1 (MQ=255) cTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTc > 8:111557/1‑148 (MQ=255) cTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTc > 1:172547/1‑148 (MQ=255) cacTGCGCCGTGGCAGCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGAt > 3:186099/3‑149 (MQ=255) tCTGCGCCGTTCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGAt < 3:146000/148‑1 (MQ=255) tCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGAt < 8:43196/148‑1 (MQ=255) tCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATg > 4:165879/1‑149 (MQ=255) acTGCGCCGTGGCAGCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATg > 5:303335/2‑149 (MQ=255) cgcCGTGCTGCCACGGCGCAGTGGCTTAGCATGCCCGTCACACCCACGACTAGAATGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGTGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATgcgc < 7:84300/148‑1 (MQ=255) ccGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTg > 2:122076/1‑148 (MQ=255) gcgaagcCACTGCGCCGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTgg > 6:182961/6‑147 (MQ=255) gTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGaa < 8:357573/149‑1 (MQ=255) cgaagcCACTGCGCCGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGAAg < 5:182961/145‑1 (MQ=255) ctgcCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGACAACAATCATGTTCAGCTGGTACCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGAAGTg < 4:177139/149‑1 (MQ=255) | CCGGTGGTCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGAAGTG > NC_002947/1892380‑1892674 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |