| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,092,426 | T→A | 6.2% | intergenic (+72/+19) | deaD → / ← ygiD | ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,092,426 | 0 | T | A | 6.2% | 238.9 / 3.4 | 81 | intergenic (+72/+19) | deaD/ygiD | ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase |
| Reads supporting (aligned to +/- strand): ref base T (34/42); new base A (3/2); total (37/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01 | |||||||||||
GAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTACG > NC_002947/2092279‑2092573 | gaAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCtt < 3:280553/149‑1 (MQ=255) aGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGc < 7:3229/149‑1 (MQ=255) gctgTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCcgc > 2:239778/1‑149 (MQ=255) ctgTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCcgc > 3:313291/1‑148 (MQ=255) gTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCcgcg > 3:189654/1‑147 (MQ=255) tCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAACTCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGa < 5:68494/147‑1 (MQ=255) cAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAagag > 3:239881/1‑149 (MQ=255) cAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAaga < 6:40904/148‑1 (MQ=255) cAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAaga < 6:336289/148‑1 (MQ=255) aaGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGTA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAgg < 6:254716/149‑1 (MQ=255) aGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGGCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGc < 7:262362/149‑1 (MQ=255) aaGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCtt < 8:166439/148‑1 (MQ=255) aaGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCtt < 5:136096/148‑1 (MQ=255) aGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCtt > 3:43933/1‑147 (MQ=255) aGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCa < 4:37188/149‑1 (MQ=255) gACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGccc < 4:352399/131‑1 (MQ=255) gACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGccc > 3:352399/1‑131 (MQ=255) acacTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTAATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTc < 6:325024/149‑1 (MQ=255) acTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCg > 3:299927/1‑148 (MQ=255) gcgTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAAc < 4:43933/147‑1 (MQ=255) cgTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGa < 2:214453/149‑1 (MQ=255) gTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGAt < 1:329554/149‑1 (MQ=255) tggctggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATa < 6:205221/149‑1 (MQ=255) gctggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGa < 8:300577/149‑1 (MQ=255) tggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGAt > 1:286609/1‑149 (MQ=255) tggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGGCCGCGAAGAGGCCCTTCAGTCGAACCGATa > 1:252531/1‑145 (MQ=255) tggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATa < 2:252531/145‑1 (MQ=255) cagcTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATcc > 6:126847/1‑149 (MQ=255) cTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATccc > 5:336407/1‑147 (MQ=255) cTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTGCAGTCGAACCGATAGATGTCCATccc > 5:231157/1‑147 (MQ=255) cTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTGCAGTCGAACCGATAGATGTCCATccc > 5:225926/1‑147 (MQ=255) tGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAg < 4:313291/149‑1 (MQ=255) aGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCTCTTCGCGGGCAAGCCCGCGaaaggg < 1:364281/112‑5 (MQ=38) aGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCTCTTCGCGGGCAAGCCCGCGaaaggg > 2:364281/1‑108 (MQ=38) gCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAgcgcg < 5:126847/149‑1 (MQ=255) cGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGcc < 5:173850/147‑1 (MQ=255) tCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAgg < 3:116353/149‑1 (MQ=255) tCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAgg < 5:230189/149‑1 (MQ=255) cTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAgg < 1:187289/102‑1 (MQ=255) cTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAgg > 2:187289/1‑102 (MQ=255) gcgAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAAccc < 4:299927/149‑1 (MQ=255) gcgAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAAccc < 4:207458/149‑1 (MQ=255) gcgAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAAccc < 4:212458/149‑1 (MQ=255) gATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGa < 4:189654/148‑1 (MQ=255) gATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGAt > 1:93243/1‑149 (MQ=255) gATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGca < 2:93243/148‑1 (MQ=255) aTCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGcac > 6:88199/1‑148 (MQ=255) aTCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGcac < 4:239881/148‑1 (MQ=255) tCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGcacca > 8:24786/1‑149 (MQ=255) tGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACg > 2:43733/1‑149 (MQ=255) gCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGcc > 3:284691/1‑148 (MQ=255) gAAAAAATCCCCGGCTTAGGTCGGGTA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCTAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCATGGTAAACCCCTGATGCACCACGCCGAACTTGc < 5:336816/149‑1 (MQ=255) gAAAAAATCCCCGGCTTAGGTCGGGGA‑GTGTTTTTACCGGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGGGGCGCTGCAGTGGACCCGATAGAGGGCCTTCCCCAGCGCGCCCGGGGGGACCGCCTGCAGCAGCGCGCGGAACTTGc > 8:254191/1‑149 (MQ=255) aaaaaaTCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGCTAGATGTGCATCCCCAGCGCGCACAGGGTAAGCCCCTGCTGCAGCGCGCCGAACTTGCt > 4:265069/1‑149 (MQ=39) aaaaaaTCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATccc > 2:324014/1‑104 (MQ=255) aaaaaaTCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATccc < 1:324014/104‑1 (MQ=255) aaaaaaTCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCt < 8:287632/149‑1 (MQ=255) tCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGc < 4:284691/149‑1 (MQ=255) ccGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAAc > 1:134312/1‑135 (MQ=255) ccGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAAc < 2:134312/135‑1 (MQ=255) ccGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGccc > 8:26124/1‑148 (MQ=255) ccGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTACCGGccc > 5:164639/1‑148 (MQ=255) cTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAgg > 6:353796/1‑149 (MQ=255) ttAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCCGTCGAACCGATAGATGTCCATCCCATGCGCGCCCAGGGTAAACCCGGGATGCACCACGCCGCACTTGCTACCGGCCCCCAggg > 4:36520/1‑149 (MQ=38) gTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCaaa < 6:164639/149‑1 (MQ=255) tCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAg < 5:88199/149‑1 (MQ=255) tCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTAAGTCGAACCGATAGATGTCAATCCCCAGCGCGCACAGGGTAAAACCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAgggaa > 6:374394/1‑144 (MQ=255) ggA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACa < 5:196579/149‑1 (MQ=255) ttttttttACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCg > 6:342563/1‑149 (MQ=255) ttttttttACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCg > 3:300254/1‑149 (MQ=255) tttACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGgcag < 7:26124/148‑1 (MQ=255) tACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCtc < 6:336407/149‑1 (MQ=255) tACCGGCCCTTTCGCGGGATTGACCGCGAAGAGGCCCTTCAGTCGAACGGATAGATGTCCATCGCCAGCGCGGCGAGGGTAAAGGCCTGATGCACCACGCCGAACTTGCTCGCGGCCCCAAGTGAAAAGAACAGCGGCAGCTAATGCt < 2:286609/148‑1 (MQ=255) ggcctcttCGCGGGCAAGCCCGCGAAAGGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCtcatca > 1:186072/7‑149 (MQ=255) gCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGc > 7:253277/1‑130 (MQ=255) gCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGc < 8:253277/130‑1 (MQ=255) ccTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTg < 4:300254/149‑1 (MQ=255) tcttCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTCATCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCAATgg > 4:323975/3‑149 (MQ=255) tcttCGCGGGCAAGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTg > 7:78500/3‑148 (MQ=255) cTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGGAAAGAACAGCGGCAGCAAATGCTCATCACTgg > 1:146647/1‑149 (MQ=255) ttCGCGGGCAAGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTg < 8:78500/146‑1 (MQ=255) gcgGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATgg > 3:354314/1‑149 (MQ=255) ttGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTACg > 2:331719/1‑148 (MQ=255) | GAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGT‑AACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTACG > NC_002947/2092279‑2092573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |